RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 MOGSQ13724 837 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 ZBTB41Q5SVQ8 909 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 FBXW10Q5XX13 1052 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 MCPH1Q8NEM0 835 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 CEP63Q96MT8 703 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 SUCLA2Q9P2R7 463 aaPredicted RBP14.11□□□□□ -0.15
COL18A1-201ENST00000342220 HPCAL4Q9UM19 191 aa14.11□□□□□ -0.15
COL18A1-201ENST00000342220 SYNGAP1Q96PV0 1343 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 TTLL13PA6NNM8 815 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 TMEM110-MUSTN1A8MSY1 372 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 H0YHG0 523 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 C6orf222P0C671 652 aaPredicted RBP14.1□□□□□ -0.15
COL18A1-201ENST00000342220 INSRRP14616 1297 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 CALRP27797 417 aaKnown RBP14.1□□□□□ -0.15
COL18A1-201ENST00000342220 VAMP7P51809 220 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 SARNPP82979 210 aaKnown RBP14.1□□□□□ -0.15
COL18A1-201ENST00000342220 CETN1Q12798 172 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 PLCB4Q15147 1175 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 SNRNP35Q16560 246 aaKnown RBP14.1□□□□□ -0.15
COL18A1-201ENST00000342220 MAP9Q49MG5 647 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 RGMBQ6NW40 437 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 NPLOC4Q8TAT6 608 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 MSTO1Q9BUK6 570 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 ARHGAP39Q9C0H5 1083 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 SETD4Q9NVD3 440 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 ARHGAP20Q9P2F6 1191 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 CAPN6Q9Y6Q1 641 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 MYPNQ86TC9 1320 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 A0A087WUV0 522 aaPredicted RBP14.1□□□□□ -0.15
COL18A1-201ENST00000342220 ASB14A6NK59 587 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 KIF11P52732 1056 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 TFAMQ00059 246 aaKnown RBP14.1□□□□□ -0.15
COL18A1-201ENST00000342220 SLC9C1Q4G0N8 1177 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 XRRA1Q6P2D8 792 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 U2AF1L4Q8WU68 220 aaKnown RBP14.1□□□□□ -0.15
COL18A1-201ENST00000342220 KAT2BQ92831 832 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 SLC35C1Q96A29 364 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 TMEM206Q9H813 350 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 EXOC7Q9UPT5 735 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 HYOU1Q9Y4L1 999 aa14.1□□□□□ -0.15
COL18A1-201ENST00000342220 TRPA1O75762 1119 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 HNRNPH1P31943 449 aaKnown RBP14.09□□□□□ -0.15
COL18A1-201ENST00000342220 MXI1P50539 228 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 NAIF1Q69YI7 327 aaPredicted RBP14.09□□□□□ -0.15
COL18A1-201ENST00000342220 LRRC31Q6UY01 552 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 SCARA5Q6ZMJ2 495 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 KIFAP3Q92845 792 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 PCYT2Q99447 389 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 ANKEF1Q9NU02 776 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 DNAJC12Q9UKB3 198 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 A0A1W2PQJ5 194 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 ANO9A1A5B4 782 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 MOCS3O95396 460 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 UCHL3P15374 230 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 KLRC1P26715 233 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 KIZQ2M2Z5 673 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 EDRF1Q3B7T1 1238 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 C2CD6Q53TS8 623 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 CELF3Q5SZQ8 465 aaKnown RBP14.09□□□□□ -0.15
COL18A1-201ENST00000342220 B3GNT9Q6UX72 402 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 TMEM161BQ8NDZ6 487 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 PSPC1Q8WXF1 523 aaKnown RBP14.09□□□□□ -0.15
COL18A1-201ENST00000342220 SEL1LQ9UBV2 794 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 TARSL2A2RTX5 802 aaKnown RBP14.09□□□□□ -0.15
COL18A1-201ENST00000342220 B4GALT5O43286 388 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 ADRB2P07550 413 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 GLRA2P23416 452 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 FMO5P49326 533 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 PPP3CAQ08209 521 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 BFSP1Q12934 665 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 FIGNQ5HY92 759 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 SPOPLQ6IQ16 392 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 COG1Q8WTW3 980 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 RPGRIP1Q96KN7 1286 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 GPR20Q99678 358 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 VIPAS39Q9H9C1 493 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 METTL14Q9HCE5 456 aaKnown RBP14.09□□□□□ -0.15
COL18A1-201ENST00000342220 SIK3Q9Y2K2 1263 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 PCDHA13Q9Y5I0 950 aa14.09□□□□□ -0.15
COL18A1-201ENST00000342220 ZC3H4Q9UPT8 1303 aaKnown RBP14.09□□□□□ -0.15
COL18A1-201ENST00000342220 FRMD3A2A2Y4 597 aa14.08□□□□□ -0.15
COL18A1-201ENST00000342220 CD58P19256 250 aa14.08□□□□□ -0.15
COL18A1-201ENST00000342220 MCM3P25205 808 aa14.08□□□□□ -0.15
COL18A1-201ENST00000342220 PON1P27169 355 aa14.08□□□□□ -0.15
COL18A1-201ENST00000342220 PPP4R3CPQ6ZMV5 832 aa14.08□□□□□ -0.15
COL18A1-201ENST00000342220 PACSIN2Q9UNF0 486 aaPredicted RBP14.08□□□□□ -0.15
COL18A1-201ENST00000342220 PLAGL2Q9UPG8 496 aa14.08□□□□□ -0.15
COL18A1-201ENST00000342220 TRAF3IP3Q9Y228 551 aa14.08□□□□□ -0.15
COL18A1-201ENST00000342220 MYH10P35580 1976 aa14.08□□□□□ -0.16
COL18A1-201ENST00000342220 CLDN3O15551 220 aa14.08□□□□□ -0.16
COL18A1-201ENST00000342220 CPP00450 1065 aa14.08□□□□□ -0.16
COL18A1-201ENST00000342220 AARSP49588 968 aaKnown RBP eCLIP14.08□□□□□ -0.163e-6■■■■■ 35.7
COL18A1-201ENST00000342220 CDK17Q00537 523 aa14.08□□□□□ -0.16
COL18A1-201ENST00000342220 TNFAIP2Q03169 654 aa14.08□□□□□ -0.16
COL18A1-201ENST00000342220 KIAA0753Q2KHM9 967 aa14.08□□□□□ -0.16
COL18A1-201ENST00000342220 CCNI2Q6ZMN8 369 aaPredicted RBP14.08□□□□□ -0.16
COL18A1-201ENST00000342220 SAPCD2Q86UD0 394 aa14.08□□□□□ -0.16
COL18A1-201ENST00000342220 CREG2Q8IUH2 290 aa14.08□□□□□ -0.16
COL18A1-201ENST00000342220 RNF169Q8NCN4 708 aa14.08□□□□□ -0.16
COL18A1-201ENST00000342220 HDAC7Q8WUI4 952 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms