RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 ACTR5Q9H9F9 607 aaPredicted RBP20.52■□□□□ 0.88
SH2B3-201ENST00000341259 SLC1A1P43005 524 aa20.52■□□□□ 0.87
SH2B3-201ENST00000341259 SPARCL1Q14515 664 aa20.52■□□□□ 0.87
SH2B3-201ENST00000341259 MXD4Q14582 209 aaPredicted RBP20.52■□□□□ 0.87
SH2B3-201ENST00000341259 ACAP3Q96P50 834 aa20.52■□□□□ 0.87
SH2B3-201ENST00000341259 NUDCD1Q96RS6 583 aa20.52■□□□□ 0.87
SH2B3-201ENST00000341259 UNC45AQ9H3U1 944 aa20.52■□□□□ 0.87
SH2B3-201ENST00000341259 RPS12P25398 132 aaKnown RBP20.51■□□□□ 0.87
SH2B3-201ENST00000341259 TSPY1Q01534 308 aa20.51■□□□□ 0.87
SH2B3-201ENST00000341259 NAB2Q15742 525 aa20.51■□□□□ 0.87
SH2B3-201ENST00000341259 ATG16L1Q676U5 607 aa20.51■□□□□ 0.87
SH2B3-201ENST00000341259 SYT2Q8N9I0 419 aaPredicted RBP20.51■□□□□ 0.87
SH2B3-201ENST00000341259 ELAC2Q9BQ52 826 aaKnown RBP20.51■□□□□ 0.87
SH2B3-201ENST00000341259 MYCP01106 439 aaPredicted RBP20.51■□□□□ 0.87
SH2B3-201ENST00000341259 JADE1Q6IE81 842 aa20.51■□□□□ 0.87
SH2B3-201ENST00000341259 OR6J1Q8NGC5 347 aa20.51■□□□□ 0.87
SH2B3-201ENST00000341259 SLC30A5Q8TAD4 765 aa20.51■□□□□ 0.87
SH2B3-201ENST00000341259 DEFB129Q9H1M3 183 aa20.51■□□□□ 0.87
SH2B3-201ENST00000341259 DBN1Q16643 649 aa20.51■□□□□ 0.87
SH2B3-201ENST00000341259 IQCA1LA6NCM1 817 aa20.51■□□□□ 0.87
SH2B3-201ENST00000341259 CREB3O43889 395 aa20.51■□□□□ 0.87
SH2B3-201ENST00000341259 STX1BP61266 288 aa20.51■□□□□ 0.87
SH2B3-201ENST00000341259 KLHL38Q2WGJ6 581 aa20.51■□□□□ 0.87
SH2B3-201ENST00000341259 COG1Q8WTW3 980 aa20.51■□□□□ 0.87
SH2B3-201ENST00000341259 ATG4CQ96DT6 458 aa20.51■□□□□ 0.87
SH2B3-201ENST00000341259 PRMT6Q96LA8 375 aaPredicted RBP20.51■□□□□ 0.87
SH2B3-201ENST00000341259 TAAR1Q96RJ0 339 aa20.51■□□□□ 0.87
SH2B3-201ENST00000341259 FBXL5Q9UKA1 691 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 STAP1Q9ULZ2 295 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 COPEO14579 308 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 PKN1Q16512 942 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 SAMD7Q7Z3H4 446 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 FBXL16Q8N461 479 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 ANGPTL3Q9Y5C1 460 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 MORC2Q9Y6X9 1032 aaPredicted RBP20.5■□□□□ 0.87
SH2B3-201ENST00000341259 IL1R1P14778 569 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 ROR1Q01973 937 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 NR1H3Q13133 447 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 CPA5Q8WXQ8 436 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 ERGIC2Q96RQ1 377 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 MKNK1Q9BUB5 465 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 SMARCAD1Q9H4L7 1026 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 HACL1Q9UJ83 578 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 MID2Q9UJV3 735 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 RFC5P40937 340 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 PPP2R2AP63151 447 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 COG7P83436 770 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 ST3GAL1Q11201 340 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 EPM2AIP1Q7L775 607 aaPredicted RBP20.5■□□□□ 0.87
SH2B3-201ENST00000341259 TUBB6Q9BUF5 446 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 FIS1Q9Y3D6 152 aa20.5■□□□□ 0.87
SH2B3-201ENST00000341259 KRT3P12035 628 aa20.49■□□□□ 0.87
SH2B3-201ENST00000341259 XPAP23025 273 aaPredicted RBP20.49■□□□□ 0.87
SH2B3-201ENST00000341259 KRT17Q04695 432 aa20.49■□□□□ 0.87
SH2B3-201ENST00000341259 R3HDM1Q15032 1099 aaKnown RBP20.49■□□□□ 0.87
SH2B3-201ENST00000341259 RBBP5Q15291 538 aaKnown RBP20.49■□□□□ 0.87
SH2B3-201ENST00000341259 SCN4BQ8IWT1 228 aa20.49■□□□□ 0.87
SH2B3-201ENST00000341259 MAML1Q92585 1016 aa20.49■□□□□ 0.87
SH2B3-201ENST00000341259 PITPNM3Q9BZ71 974 aa20.49■□□□□ 0.87
SH2B3-201ENST00000341259 SALL1Q9NSC2 1324 aa20.49■□□□□ 0.87
SH2B3-201ENST00000341259 ICAM1P05362 532 aa20.49■□□□□ 0.87
SH2B3-201ENST00000341259 WDR72Q3MJ13 1102 aa20.49■□□□□ 0.87
SH2B3-201ENST00000341259 SRRM1Q8IYB3 904 aaKnown RBP20.49■□□□□ 0.87
SH2B3-201ENST00000341259 UVRAGQ9P2Y5 699 aa20.49■□□□□ 0.87
SH2B3-201ENST00000341259 FNDC3AQ9Y2H6 1198 aaKnown RBP20.49■□□□□ 0.87
SH2B3-201ENST00000341259 MAFGO15525 162 aa20.49■□□□□ 0.87
SH2B3-201ENST00000341259 KLHDC7AQ5VTJ3 777 aa20.49■□□□□ 0.87
SH2B3-201ENST00000341259 ACER1Q8TDN7 264 aa20.49■□□□□ 0.87
SH2B3-201ENST00000341259 TTC17Q96AE7 1141 aa20.49■□□□□ 0.87
SH2B3-201ENST00000341259 RUSC1Q9BVN2 902 aa20.49■□□□□ 0.87
SH2B3-201ENST00000341259 SNRPFP62306 86 aaKnown RBP20.49■□□□□ 0.87
SH2B3-201ENST00000341259 IZUMO3Q5VZ72 239 aa20.49■□□□□ 0.87
SH2B3-201ENST00000341259 XRRA1Q6P2D8 792 aa20.49■□□□□ 0.87
SH2B3-201ENST00000341259 ATP6V1G3Q96LB4 118 aa20.49■□□□□ 0.87
SH2B3-201ENST00000341259 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.49■□□□□ 0.87
SH2B3-201ENST00000341259 NCOA4Q13772 614 aa20.48■□□□□ 0.87
SH2B3-201ENST00000341259 FAM205AQ6ZU69 1335 aa20.48■□□□□ 0.87
SH2B3-201ENST00000341259 CTIFO43310 598 aaKnown RBP20.48■□□□□ 0.87
SH2B3-201ENST00000341259 HNRNPH2P55795 449 aaKnown RBP20.48■□□□□ 0.87
SH2B3-201ENST00000341259 EZH2Q15910 746 aaKnown RBP20.48■□□□□ 0.87
SH2B3-201ENST00000341259 ATP6V1E2Q96A05 226 aa20.48■□□□□ 0.87
SH2B3-201ENST00000341259 ZNF560Q96MR9 790 aa20.48■□□□□ 0.87
SH2B3-201ENST00000341259 EHD4Q9H223 541 aa20.48■□□□□ 0.87
SH2B3-201ENST00000341259 MED24O75448 989 aa20.48■□□□□ 0.87
SH2B3-201ENST00000341259 CYP11B2P19099 503 aa20.48■□□□□ 0.87
SH2B3-201ENST00000341259 CAP2P40123 477 aa20.48■□□□□ 0.87
SH2B3-201ENST00000341259 PDIA2Q13087 525 aaKnown RBP20.48■□□□□ 0.87
SH2B3-201ENST00000341259 LRGUKQ96M69 825 aa20.48■□□□□ 0.87
SH2B3-201ENST00000341259 ZCCHC17Q9NP64 241 aaKnown RBP20.48■□□□□ 0.87
SH2B3-201ENST00000341259 TTI1O43156 1089 aa20.48■□□□□ 0.87
SH2B3-201ENST00000341259 CSPG5O95196 566 aa20.48■□□□□ 0.87
SH2B3-201ENST00000341259 BCAR1P56945 870 aa20.48■□□□□ 0.87
SH2B3-201ENST00000341259 RPS6P62753 249 aaKnown RBP20.48■□□□□ 0.87
SH2B3-201ENST00000341259 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.48■□□□□ 0.87
SH2B3-201ENST00000341259 FBXO28Q9NVF7 368 aa20.48■□□□□ 0.87
SH2B3-201ENST00000341259 POLRMTO00411 1230 aaKnown RBP20.48■□□□□ 0.87
SH2B3-201ENST00000341259 MAPK13O15264 365 aa20.48■□□□□ 0.87
SH2B3-201ENST00000341259 KRT38O76015 456 aa20.48■□□□□ 0.87
SH2B3-201ENST00000341259 HP1BP3Q5SSJ5 553 aaPredicted RBP20.48■□□□□ 0.87
SH2B3-201ENST00000341259 CHST13Q8NET6 341 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms