RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 TBCBQ99426 244 aa18.09■□□□□ 0.49
CDK11B-201ENST00000340677 CFL2Q9Y281 166 aa18.09■□□□□ 0.49
CDK11B-201ENST00000340677 USP20Q9Y2K6 914 aa18.09■□□□□ 0.49
CDK11B-201ENST00000340677 C5orf60A6NFR6 353 aa18.09■□□□□ 0.49
CDK11B-201ENST00000340677 PRKAB2O43741 272 aa18.09■□□□□ 0.49
CDK11B-201ENST00000340677 STAMBPO95630 424 aa18.09■□□□□ 0.49
CDK11B-201ENST00000340677 RCAN1P53805 252 aa18.09■□□□□ 0.49
CDK11B-201ENST00000340677 HSPA14Q0VDF9 509 aa18.09■□□□□ 0.49
CDK11B-201ENST00000340677 PHLDB2Q86SQ0 1253 aa18.09■□□□□ 0.49
CDK11B-201ENST00000340677 CIB1Q99828 191 aa18.09■□□□□ 0.49
CDK11B-201ENST00000340677 MRPL9Q9BYD2 267 aaKnown RBP18.09■□□□□ 0.49
CDK11B-201ENST00000340677 GPHNQ9NQX3 736 aaPredicted RBP18.09■□□□□ 0.49
CDK11B-201ENST00000340677 CRNNQ9UBG3 495 aaPredicted RBP18.09■□□□□ 0.49
CDK11B-201ENST00000340677 DDX60LQ5H9U9 1706 aaKnown RBP18.09■□□□□ 0.49
CDK11B-201ENST00000340677 GOLGA8CPA6NN73 597 aa18.08■□□□□ 0.49
CDK11B-201ENST00000340677 ZW10O43264 779 aa18.08■□□□□ 0.49
CDK11B-201ENST00000340677 JAK2O60674 1132 aa18.08■□□□□ 0.49
CDK11B-201ENST00000340677 CD9P21926 228 aa18.08■□□□□ 0.49
CDK11B-201ENST00000340677 WEE1P30291 646 aa18.08■□□□□ 0.49
CDK11B-201ENST00000340677 FKBP1AP62942 108 aaKnown RBP18.08■□□□□ 0.49
CDK11B-201ENST00000340677 GOLGA8FQ08AF8 430 aa18.08■□□□□ 0.49
CDK11B-201ENST00000340677 GOLGA8DPQ0D2H9 430 aa18.08■□□□□ 0.49
CDK11B-201ENST00000340677 SBK1Q52WX2 424 aa18.08■□□□□ 0.49
CDK11B-201ENST00000340677 ZNF600Q6ZNG1 722 aa18.08■□□□□ 0.49
CDK11B-201ENST00000340677 ANKMY2Q8IV38 441 aa18.08■□□□□ 0.49
CDK11B-201ENST00000340677 SUPT20HQ8NEM7 779 aa18.08■□□□□ 0.49
CDK11B-201ENST00000340677 NELL1Q92832 810 aa18.08■□□□□ 0.49
CDK11B-201ENST00000340677 GFM2Q969S9 779 aaKnown RBP18.08■□□□□ 0.49
CDK11B-201ENST00000340677 C12orf4Q9NQ89 552 aa18.08■□□□□ 0.49
CDK11B-201ENST00000340677 TELO2Q9Y4R8 837 aa18.08■□□□□ 0.49
CDK11B-201ENST00000340677 MROH7-TTC4A0A0A0MT08 1334 aa18.08■□□□□ 0.48
CDK11B-201ENST00000340677 RNASEH2AO75792 299 aaKnown RBP18.08■□□□□ 0.48
CDK11B-201ENST00000340677 CD53P19397 219 aa18.08■□□□□ 0.48
CDK11B-201ENST00000340677 NR1D1P20393 614 aa18.08■□□□□ 0.48
CDK11B-201ENST00000340677 HSD17B7P56937 341 aa18.08■□□□□ 0.48
CDK11B-201ENST00000340677 KRT83P78385 493 aa18.08■□□□□ 0.48
CDK11B-201ENST00000340677 SP140Q13342 867 aa18.08■□□□□ 0.48
CDK11B-201ENST00000340677 R3HDM1Q15032 1099 aaKnown RBP18.08■□□□□ 0.48
CDK11B-201ENST00000340677 SNRNP48Q6IEG0 339 aaKnown RBP18.08■□□□□ 0.48
CDK11B-201ENST00000340677 SPATA24Q86W54 205 aa18.08■□□□□ 0.48
CDK11B-201ENST00000340677 CADM3Q8N126 398 aa18.08■□□□□ 0.48
CDK11B-201ENST00000340677 FBF1Q8TES7 1133 aa18.08■□□□□ 0.48
CDK11B-201ENST00000340677 VTA1Q9NP79 307 aa18.08■□□□□ 0.48
CDK11B-201ENST00000340677 ZMYND10O75800 440 aa18.07■□□□□ 0.48
CDK11B-201ENST00000340677 FGRP09769 529 aa18.07■□□□□ 0.48
CDK11B-201ENST00000340677 EVI2BP34910 448 aa18.07■□□□□ 0.48
CDK11B-201ENST00000340677 DIXDC1Q155Q3 683 aa18.07■□□□□ 0.48
CDK11B-201ENST00000340677 TTC39BQ5VTQ0 682 aaPredicted RBP18.07■□□□□ 0.48
CDK11B-201ENST00000340677 KLHL35Q6PF15 583 aa18.07■□□□□ 0.48
CDK11B-201ENST00000340677 SH3BP5LQ7L8J4 393 aa18.07■□□□□ 0.48
CDK11B-201ENST00000340677 NOP9Q86U38 636 aaKnown RBP18.07■□□□□ 0.48
CDK11B-201ENST00000340677 RAVER1Q8IY67 606 aaKnown RBP18.07■□□□□ 0.48
CDK11B-201ENST00000340677 DNAJC9Q8WXX5 260 aa18.07■□□□□ 0.48
CDK11B-201ENST00000340677 HSPBAP1Q96EW2 488 aa18.07■□□□□ 0.48
CDK11B-201ENST00000340677 DNAJC1Q96KC8 554 aaKnown RBP18.07■□□□□ 0.48
CDK11B-201ENST00000340677 SCAND2PQ9GZW5 306 aaPredicted RBP18.07■□□□□ 0.48
CDK11B-201ENST00000340677 BRCA1P38398 1863 aaKnown RBP18.07■□□□□ 0.48
CDK11B-201ENST00000340677 SFI1A8K8P3 1242 aa18.07■□□□□ 0.48
CDK11B-201ENST00000340677 CCNT1O60563 726 aaKnown RBP18.07■□□□□ 0.48
CDK11B-201ENST00000340677 PRKACAP17612 351 aa18.07■□□□□ 0.48
CDK11B-201ENST00000340677 ANTXR2P58335 489 aa18.07■□□□□ 0.48
CDK11B-201ENST00000340677 PPARAQ07869 468 aa18.07■□□□□ 0.48
CDK11B-201ENST00000340677 MKRN3Q13064 507 aaKnown RBP18.07■□□□□ 0.48
CDK11B-201ENST00000340677 PODNQ7Z5L7 613 aa18.07■□□□□ 0.48
CDK11B-201ENST00000340677 CALN1Q9BXU9 219 aa18.07■□□□□ 0.48
CDK11B-201ENST00000340677 FANCFQ9NPI8 374 aa18.07■□□□□ 0.48
CDK11B-201ENST00000340677 NKX1-2Q9UD57 310 aaPredicted RBP18.07■□□□□ 0.48
CDK11B-201ENST00000340677 PCDHGA8Q9Y5G5 932 aa18.07■□□□□ 0.48
CDK11B-201ENST00000340677 STRNO43815 780 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 NAGAP17050 411 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 PDCP20941 246 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 DYNLL1P63167 89 aaKnown RBP18.06■□□□□ 0.48
CDK11B-201ENST00000340677 ZC2HC1CQ53FD0 456 aaPredicted RBP18.06■□□□□ 0.48
CDK11B-201ENST00000340677 CCDC62Q6P9F0 684 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 CCNI2Q6ZMN8 369 aaPredicted RBP18.06■□□□□ 0.48
CDK11B-201ENST00000340677 MFSD6Q6ZSS7 791 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 ITPKCQ96DU7 683 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 DNAJC18Q9H819 358 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 UBN1Q9NPG3 1134 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 E7ENQ6 273 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 ENO2P09104 434 aaPredicted RBP18.06■□□□□ 0.48
CDK11B-201ENST00000340677 CTRB1P17538 263 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 PTPN2P17706 415 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 ATP11AP98196 1134 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 IKQ13123 557 aaPredicted RBP18.06■□□□□ 0.48
CDK11B-201ENST00000340677 CYLC2Q14093 348 aaPredicted RBP18.06■□□□□ 0.48
CDK11B-201ENST00000340677 INSCQ1MX18 579 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 CEP78Q5JTW2 689 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 CTRB2Q6GPI1 263 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 PPP4R3AQ6IN85 833 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 AADATQ8N5Z0 425 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 AENQ8WTP8 325 aaKnown RBP18.06■□□□□ 0.48
CDK11B-201ENST00000340677 RRP36Q96EU6 259 aaKnown RBP18.06■□□□□ 0.48
CDK11B-201ENST00000340677 NUP85Q9BW27 656 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 SERHL2Q9H4I8 314 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 MRPL44Q9H9J2 332 aaKnown RBP18.06■□□□□ 0.48
CDK11B-201ENST00000340677 ARPP21Q9UBL0 812 aaPredicted RBP18.06■□□□□ 0.48
CDK11B-201ENST00000340677 PCDHB6Q9Y5E3 794 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 NUMBLQ9Y6R0 609 aa18.06■□□□□ 0.48
CDK11B-201ENST00000340677 GOLGA8JA6NMD2 632 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms