RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 PLXNB3Q9ULL4 1909 aa12.97□□□□□ -0.33
ATXN3-201ENST00000340660 CHGBP05060 677 aa12.96□□□□□ -0.33
ATXN3-201ENST00000340660 CHRNB1P11230 501 aa12.96□□□□□ -0.33
ATXN3-201ENST00000340660 ABCG1P45844 678 aa12.96□□□□□ -0.33
ATXN3-201ENST00000340660 ALDH7A1P49419 539 aaKnown RBP12.96□□□□□ -0.33
ATXN3-201ENST00000340660 PPFIA1Q13136 1202 aa12.96□□□□□ -0.33
ATXN3-201ENST00000340660 CLN3Q13286 438 aa12.96□□□□□ -0.33
ATXN3-201ENST00000340660 GRIK4Q16099 956 aa12.96□□□□□ -0.33
ATXN3-201ENST00000340660 SBK1Q52WX2 424 aa12.96□□□□□ -0.33
ATXN3-201ENST00000340660 UTP14CQ5TAP6 766 aaKnown RBP12.96□□□□□ -0.33
ATXN3-201ENST00000340660 ARHGEF16Q5VV41 709 aa12.96□□□□□ -0.33
ATXN3-201ENST00000340660 NEDD1Q8NHV4 660 aa12.96□□□□□ -0.33
ATXN3-201ENST00000340660 PHKBQ93100 1093 aa12.96□□□□□ -0.33
ATXN3-201ENST00000340660 EAF2Q96CJ1 260 aaPredicted RBP12.96□□□□□ -0.33
ATXN3-201ENST00000340660 ZC3H10Q96K80 434 aaKnown RBP12.96□□□□□ -0.33
ATXN3-201ENST00000340660 EMILIN2Q9BXX0 1053 aa12.96□□□□□ -0.33
ATXN3-201ENST00000340660 DKK4Q9UBT3 224 aa12.96□□□□□ -0.33
ATXN3-201ENST00000340660 ZNF215Q9UL58 517 aaPredicted RBP12.96□□□□□ -0.33
ATXN3-201ENST00000340660 CDH7Q9ULB5 785 aa12.96□□□□□ -0.33
ATXN3-201ENST00000340660 WDR19Q8NEZ3 1342 aa12.95□□□□□ -0.34
ATXN3-201ENST00000340660 NOP56O00567 594 aaKnown RBP12.95□□□□□ -0.34
ATXN3-201ENST00000340660 CAVIN2O95810 425 aa12.95□□□□□ -0.34
ATXN3-201ENST00000340660 HOXA6P31267 233 aa12.95□□□□□ -0.34
ATXN3-201ENST00000340660 CLLU1OSQ5K130 101 aa12.95□□□□□ -0.34
ATXN3-201ENST00000340660 KCNV1Q6PIU1 500 aa12.95□□□□□ -0.34
ATXN3-201ENST00000340660 PIP4P1Q86T03 277 aa12.95□□□□□ -0.34
ATXN3-201ENST00000340660 PHF20Q9BVI0 1012 aa12.95□□□□□ -0.34
ATXN3-201ENST00000340660 CELF4Q9BZC1 486 aaKnown RBP12.95□□□□□ -0.34
ATXN3-201ENST00000340660 GRIP2Q9C0E4 1043 aa12.95□□□□□ -0.34
ATXN3-201ENST00000340660 NT5C3AQ9H0P0 336 aa12.95□□□□□ -0.34
ATXN3-201ENST00000340660 PIDD1Q9HB75 910 aa12.95□□□□□ -0.34
ATXN3-201ENST00000340660 PXMP2Q9NR77 195 aa12.95□□□□□ -0.34
ATXN3-201ENST00000340660 MAFO75444 373 aaPredicted RBP12.94□□□□□ -0.34
ATXN3-201ENST00000340660 RDXP35241 583 aaKnown RBP12.94□□□□□ -0.34
ATXN3-201ENST00000340660 CSRP3P50461 194 aa12.94□□□□□ -0.34
ATXN3-201ENST00000340660 TTF1Q15361 905 aaPredicted RBP12.94□□□□□ -0.34
ATXN3-201ENST00000340660 USH1GQ495M9 461 aa12.94□□□□□ -0.34
ATXN3-201ENST00000340660 PLK5Q496M5 336 aa12.94□□□□□ -0.34
ATXN3-201ENST00000340660 ZNF385CQ66K41 422 aaPredicted RBP12.94□□□□□ -0.34
ATXN3-201ENST00000340660 SSH1Q8WYL5 1049 aa12.94□□□□□ -0.34
ATXN3-201ENST00000340660 IGSF21Q96ID5 467 aa12.94□□□□□ -0.34
ATXN3-201ENST00000340660 NOC2LQ9Y3T9 749 aaKnown RBP12.94□□□□□ -0.34
ATXN3-201ENST00000340660 KDM3AQ9Y4C1 1321 aa12.93□□□□□ -0.34
ATXN3-201ENST00000340660 BCLAF3A2AJT9 711 aaKnown RBP12.93□□□□□ -0.34
ATXN3-201ENST00000340660 MINDY4BA8MYZ0 360 aa12.93□□□□□ -0.34
ATXN3-201ENST00000340660 M0QZ92 97 aa12.93□□□□□ -0.34
ATXN3-201ENST00000340660 MAN2B1O00754 1011 aa12.93□□□□□ -0.34
ATXN3-201ENST00000340660 C2CD2LO14523 706 aa12.93□□□□□ -0.34
ATXN3-201ENST00000340660 SSBP05455 408 aaKnown RBP eCLIP12.93□□□□□ -0.34
ATXN3-201ENST00000340660 TSPY3P0CV98 308 aa12.93□□□□□ -0.34
ATXN3-201ENST00000340660 TSPY8P0CW00 308 aa12.93□□□□□ -0.34
ATXN3-201ENST00000340660 CREB5Q02930 508 aa12.93□□□□□ -0.34
ATXN3-201ENST00000340660 ZNF423Q2M1K9 1284 aa12.93□□□□□ -0.34
ATXN3-201ENST00000340660 Q6ZS52 159 aa12.93□□□□□ -0.34
ATXN3-201ENST00000340660 TMEM40Q8WWA1 233 aa12.93□□□□□ -0.34
ATXN3-201ENST00000340660 FGF13Q92913 245 aa12.93□□□□□ -0.34
ATXN3-201ENST00000340660 PLA2G2FQ9BZM2 168 aa12.93□□□□□ -0.34
ATXN3-201ENST00000340660 ANKMY1Q9P2S6 941 aa12.93□□□□□ -0.34
ATXN3-201ENST00000340660 FLNCQ14315 2725 aa12.93□□□□□ -0.34
ATXN3-201ENST00000340660 PATE3B3GLJ2 98 aa12.92□□□□□ -0.34
ATXN3-201ENST00000340660 CCDC192P0DO97 292 aa12.92□□□□□ -0.34
ATXN3-201ENST00000340660 TGFB3P10600 412 aa12.92□□□□□ -0.34
ATXN3-201ENST00000340660 GP1BBP13224 206 aa12.92□□□□□ -0.34
ATXN3-201ENST00000340660 ITPKBP27987 946 aa12.92□□□□□ -0.34
ATXN3-201ENST00000340660 ADD2P35612 726 aa12.92□□□□□ -0.34
ATXN3-201ENST00000340660 PXNP49023 591 aaPredicted RBP12.92□□□□□ -0.34
ATXN3-201ENST00000340660 POU4F2Q12837 409 aa12.92□□□□□ -0.34
ATXN3-201ENST00000340660 ABI1Q8IZP0 508 aa12.92□□□□□ -0.34
ATXN3-201ENST00000340660 WHAMMQ8TF30 809 aa12.92□□□□□ -0.34
ATXN3-201ENST00000340660 FAM3CQ92520 227 aa12.92□□□□□ -0.34
ATXN3-201ENST00000340660 KAT6AQ92794 2004 aa12.92□□□□□ -0.34
ATXN3-201ENST00000340660 DUSP15Q9H1R2 295 aaPredicted RBP12.92□□□□□ -0.34
ATXN3-201ENST00000340660 SMC4Q9NTJ3 1288 aa12.92□□□□□ -0.34
ATXN3-201ENST00000340660 RBM12Q9NTZ6 932 aaKnown RBP12.92□□□□□ -0.34
ATXN3-201ENST00000340660 PNMA2Q9UL42 364 aa12.92□□□□□ -0.34
ATXN3-201ENST00000340660 STX8Q9UNK0 236 aa12.92□□□□□ -0.34
ATXN3-201ENST00000340660 ST3GAL5Q9UNP4 418 aa12.92□□□□□ -0.34
ATXN3-201ENST00000340660 B8ZZF3 427 aa12.91□□□□□ -0.34
ATXN3-201ENST00000340660 RPS6KA5O75582 802 aa12.91□□□□□ -0.34
ATXN3-201ENST00000340660 SPATA31D3P0C874 917 aa12.91□□□□□ -0.34
ATXN3-201ENST00000340660 MYCLP12524 364 aaPredicted RBP12.91□□□□□ -0.34
ATXN3-201ENST00000340660 IGBP1P78318 339 aa12.91□□□□□ -0.34
ATXN3-201ENST00000340660 NTHL1P78549 312 aa12.91□□□□□ -0.34
ATXN3-201ENST00000340660 DSC3Q14574 896 aa12.91□□□□□ -0.34
ATXN3-201ENST00000340660 WDR44Q5JSH3 913 aa12.91□□□□□ -0.34
ATXN3-201ENST00000340660 SPATA31D4Q6ZUB0 917 aa12.91□□□□□ -0.34
ATXN3-201ENST00000340660 IL31RAQ8NI17 732 aa12.91□□□□□ -0.34
ATXN3-201ENST00000340660 DCAF4Q8WV16 495 aa12.91□□□□□ -0.34
ATXN3-201ENST00000340660 DNASE1L2Q92874 299 aa12.91□□□□□ -0.34
ATXN3-201ENST00000340660 ZNF837Q96EG3 531 aaPredicted RBP12.91□□□□□ -0.34
ATXN3-201ENST00000340660 RAB6BQ9NRW1 208 aa12.91□□□□□ -0.34
ATXN3-201ENST00000340660 ZMYM2Q9UBW7 1377 aa12.91□□□□□ -0.34
ATXN3-201ENST00000340660 DOCK6Q96HP0 2047 aa12.91□□□□□ -0.34
ATXN3-201ENST00000340660 COL4A2P08572 1712 aa12.91□□□□□ -0.34
ATXN3-201ENST00000340660 GOLIM4O00461 696 aa12.9□□□□□ -0.34
ATXN3-201ENST00000340660 KHNYNO15037 678 aaKnown RBP12.9□□□□□ -0.34
ATXN3-201ENST00000340660 ZC3H11AO75152 810 aaKnown RBP eCLIP12.9□□□□□ -0.34
ATXN3-201ENST00000340660 GLUD1P00367 558 aa12.9□□□□□ -0.34
ATXN3-201ENST00000340660 RPLP2P05387 115 aaKnown RBP12.9□□□□□ -0.34
ATXN3-201ENST00000340660 MARK3P27448 753 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms