RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 MKL1Q969V6 931 aa16.46■□□□□ 0.23
LIMK2-203ENST00000340552 TIPINQ9BVW5 301 aa16.46■□□□□ 0.23
LIMK2-203ENST00000340552 SUDS3Q9H7L9 328 aaPredicted RBP16.46■□□□□ 0.23
LIMK2-203ENST00000340552 CTTNBP2NLQ9P2B4 639 aa16.46■□□□□ 0.23
LIMK2-203ENST00000340552 KLHL14Q9P2G3 628 aa16.46■□□□□ 0.23
LIMK2-203ENST00000340552 HAO1Q9UJM8 370 aa16.46■□□□□ 0.23
LIMK2-203ENST00000340552 STXBP5LQ9Y2K9 1186 aa16.46■□□□□ 0.23
LIMK2-203ENST00000340552 ESYT2A0FGR8 921 aa16.46■□□□□ 0.23
LIMK2-203ENST00000340552 RASGRF2O14827 1237 aa16.46■□□□□ 0.23
LIMK2-203ENST00000340552 ATP9AO75110 1047 aa16.46■□□□□ 0.23
LIMK2-203ENST00000340552 GH1P01241 217 aa16.46■□□□□ 0.23
LIMK2-203ENST00000340552 FGFR4P22455 802 aa16.46■□□□□ 0.23
LIMK2-203ENST00000340552 SESN3P58005 492 aa16.46■□□□□ 0.23
LIMK2-203ENST00000340552 CCDC15Q0P6D6 951 aa16.46■□□□□ 0.23
LIMK2-203ENST00000340552 DALRD3Q5D0E6 543 aaKnown RBP16.46■□□□□ 0.23
LIMK2-203ENST00000340552 ACBD5Q5T8D3 534 aaPredicted RBP16.46■□□□□ 0.23
LIMK2-203ENST00000340552 CNNM4Q6P4Q7 775 aa16.46■□□□□ 0.23
LIMK2-203ENST00000340552 VSTM1Q6UX27 236 aa16.46■□□□□ 0.23
LIMK2-203ENST00000340552 PTPRN2Q92932 1015 aa16.46■□□□□ 0.23
LIMK2-203ENST00000340552 PPP1R1BQ9UD71 204 aaPredicted RBP16.46■□□□□ 0.23
LIMK2-203ENST00000340552 CNOT7Q9UIV1 285 aaKnown RBP16.46■□□□□ 0.23
LIMK2-203ENST00000340552 COL2A1P02458 1487 aaPredicted RBP16.45■□□□□ 0.22
LIMK2-203ENST00000340552 ATP6V1G1O75348 118 aa16.45■□□□□ 0.22
LIMK2-203ENST00000340552 FGGP02679 453 aa16.45■□□□□ 0.22
LIMK2-203ENST00000340552 EPHB2P29323 1055 aa16.45■□□□□ 0.22
LIMK2-203ENST00000340552 DR1Q01658 176 aa16.45■□□□□ 0.22
LIMK2-203ENST00000340552 NONOQ15233 471 aaKnown RBP eCLIP16.45■□□□□ 0.22
LIMK2-203ENST00000340552 COBLL1Q53SF7 1204 aa16.45■□□□□ 0.22
LIMK2-203ENST00000340552 DPY19L2Q6NUT2 758 aa16.45■□□□□ 0.22
LIMK2-203ENST00000340552 ANKRD42Q8N9B4 389 aa16.45■□□□□ 0.22
LIMK2-203ENST00000340552 CKAP2Q8WWK9 683 aa16.45■□□□□ 0.22
LIMK2-203ENST00000340552 TMEM109Q9BVC6 243 aa16.45■□□□□ 0.22
LIMK2-203ENST00000340552 DENND2DQ9H6A0 471 aaPredicted RBP16.45■□□□□ 0.22
LIMK2-203ENST00000340552 ZNF70Q9UC06 446 aaPredicted RBP16.45■□□□□ 0.22
LIMK2-203ENST00000340552 DAAM1Q9Y4D1 1078 aa16.45■□□□□ 0.22
LIMK2-203ENST00000340552 PNMA6FA0A0J9YX94 578 aa16.45■□□□□ 0.22
LIMK2-203ENST00000340552 ABCD1P33897 745 aa16.45■□□□□ 0.22
LIMK2-203ENST00000340552 MAGEA10P43363 369 aaPredicted RBP16.45■□□□□ 0.22
LIMK2-203ENST00000340552 ARHGAP27Q6ZUM4 889 aa16.45■□□□□ 0.22
LIMK2-203ENST00000340552 ADAT2Q7Z6V5 191 aaKnown RBP16.45■□□□□ 0.22
LIMK2-203ENST00000340552 SESTD1Q86VW0 696 aa16.45■□□□□ 0.22
LIMK2-203ENST00000340552 SIAH1Q8IUQ4 282 aa16.45■□□□□ 0.22
LIMK2-203ENST00000340552 REXO1Q8N1G1 1221 aaKnown RBP16.45■□□□□ 0.22
LIMK2-203ENST00000340552 TBC1D10AQ9BXI6 508 aa16.45■□□□□ 0.22
LIMK2-203ENST00000340552 BIN2Q9UBW5 565 aaPredicted RBP16.45■□□□□ 0.22
LIMK2-203ENST00000340552 FOXO6A8MYZ6 492 aa16.44■□□□□ 0.22
LIMK2-203ENST00000340552 PTENP60484 403 aa16.44■□□□□ 0.22
LIMK2-203ENST00000340552 BTNL9Q6UXG8 535 aa16.44■□□□□ 0.22
LIMK2-203ENST00000340552 STMN4Q9H169 189 aaPredicted RBP16.44■□□□□ 0.22
LIMK2-203ENST00000340552 ERVK-5Q9HDB9 667 aa16.44■□□□□ 0.22
LIMK2-203ENST00000340552 MROH7Q68CQ1 1323 aa16.44■□□□□ 0.22
LIMK2-203ENST00000340552 TJP3O95049 919 aa16.44■□□□□ 0.22
LIMK2-203ENST00000340552 CXCL9Q07325 125 aa16.44■□□□□ 0.22
LIMK2-203ENST00000340552 MCL1Q07820 350 aa16.44■□□□□ 0.22
LIMK2-203ENST00000340552 CNPY1Q3B7I2 92 aa16.44■□□□□ 0.22
LIMK2-203ENST00000340552 WASHC2DQ5SRD0 308 aa16.44■□□□□ 0.22
LIMK2-203ENST00000340552 SLFN13Q68D06 897 aa16.44■□□□□ 0.22
LIMK2-203ENST00000340552 CABP7Q86V35 215 aa16.44■□□□□ 0.22
LIMK2-203ENST00000340552 AGBL3Q8NEM8 1001 aa16.44■□□□□ 0.22
LIMK2-203ENST00000340552 ERP27Q96DN0 273 aa16.44■□□□□ 0.22
LIMK2-203ENST00000340552 GBP5Q96PP8 586 aa16.44■□□□□ 0.22
LIMK2-203ENST00000340552 TGS1Q96RS0 853 aaKnown RBP16.44■□□□□ 0.22
LIMK2-203ENST00000340552 USP20Q9Y2K6 914 aa16.44■□□□□ 0.22
LIMK2-203ENST00000340552 USP17L10C9JJH3 530 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 KIAA0391O15091 583 aaKnown RBP16.43■□□□□ 0.22
LIMK2-203ENST00000340552 PENKP01210 267 aaPredicted RBP16.43■□□□□ 0.22
LIMK2-203ENST00000340552 GH2P01242 217 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 CYP1A1P04798 512 aaPredicted RBP16.43■□□□□ 0.22
LIMK2-203ENST00000340552 VHLP40337 213 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 PTK2Q05397 1052 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 ASIC2Q16515 512 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 LETM2Q2VYF4 491 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 RBM26Q5T8P6 1007 aaKnown RBP16.43■□□□□ 0.22
LIMK2-203ENST00000340552 SLFN11Q7Z7L1 901 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 ZC3H18Q86VM9 953 aaKnown RBP16.43■□□□□ 0.22
LIMK2-203ENST00000340552 LCA5Q86VQ0 697 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 VSIG1Q86XK7 387 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 NRG4Q8WWG1 115 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 SLC7A6OSQ96CW6 309 aaPredicted RBP16.43■□□□□ 0.22
LIMK2-203ENST00000340552 KIAA1683Q9H0B3 1180 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 TAOK3Q9H2K8 898 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.43■□□□□ 0.228e-13■■■■□ 24.1
LIMK2-203ENST00000340552 SUCLA2Q9P2R7 463 aaPredicted RBP16.43■□□□□ 0.22
LIMK2-203ENST00000340552 ATAD5Q96QE3 1844 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 RIPK2O43353 540 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 ADCY7P51828 1080 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 JAG1P78504 1218 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 MPP2Q14168 576 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 RRP1BQ14684 758 aaKnown RBP16.43■□□□□ 0.22
LIMK2-203ENST00000340552 SPDYE2Q495Y8 402 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 INTS8Q75QN2 995 aaKnown RBP16.43■□□□□ 0.22
LIMK2-203ENST00000340552 NEK8Q86SG6 692 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 NT5DC3Q86UY8 548 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 DCAF4Q8WV16 495 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 FAM151AQ8WW52 585 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 GATA6Q92908 595 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 FAM192AQ9GZU8 254 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 CUEDC2Q9H467 287 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 MAGEF1Q9HAY2 307 aa16.43■□□□□ 0.22
LIMK2-203ENST00000340552 GRHL1Q9NZI5 618 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms