RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 MATR3P43243 847 aaKnown RBP eCLIP21.06■□□□□ 0.96
SYNE4-202ENST00000340477 BCAR1P56945 870 aa21.06■□□□□ 0.96
SYNE4-202ENST00000340477 AXDND1Q5T1B0 1012 aaPredicted RBP21.06■□□□□ 0.96
SYNE4-202ENST00000340477 HAUS6Q7Z4H7 955 aa21.06■□□□□ 0.96
SYNE4-202ENST00000340477 LEO1Q8WVC0 666 aaPredicted RBP21.06■□□□□ 0.96
SYNE4-202ENST00000340477 POF1BQ8WVV4 589 aa21.06■□□□□ 0.96
SYNE4-202ENST00000340477 TMEM169Q96HH4 297 aa21.06■□□□□ 0.96
SYNE4-202ENST00000340477 GAD1Q99259 594 aa21.06■□□□□ 0.96
SYNE4-202ENST00000340477 ACO2Q99798 780 aaKnown RBP21.06■□□□□ 0.96
SYNE4-202ENST00000340477 SEL1LQ9UBV2 794 aa21.06■□□□□ 0.96
SYNE4-202ENST00000340477 TCHHQ07283 1943 aa21.06■□□□□ 0.96
SYNE4-202ENST00000340477 TTLL13PA6NNM8 815 aa21.05■□□□□ 0.96
SYNE4-202ENST00000340477 POMCP01189 267 aa21.05■□□□□ 0.96
SYNE4-202ENST00000340477 EDN1P05305 212 aa21.05■□□□□ 0.96
SYNE4-202ENST00000340477 IDEP14735 1019 aa21.05■□□□□ 0.96
SYNE4-202ENST00000340477 AKAP5P24588 427 aa21.05■□□□□ 0.96
SYNE4-202ENST00000340477 BMS1Q14692 1282 aaKnown RBP21.05■□□□□ 0.96
SYNE4-202ENST00000340477 RESP18Q5W5W9 173 aa21.05■□□□□ 0.96
SYNE4-202ENST00000340477 EEF1DP3Q658K8 133 aa21.05■□□□□ 0.96
SYNE4-202ENST00000340477 MPZL3Q6UWV2 235 aa21.05■□□□□ 0.96
SYNE4-202ENST00000340477 ZPBP2Q6X784 338 aa21.05■□□□□ 0.96
SYNE4-202ENST00000340477 SPPL3Q8TCT6 385 aa21.05■□□□□ 0.96
SYNE4-202ENST00000340477 CCDC94Q9BW85 323 aaPredicted RBP21.05■□□□□ 0.96
SYNE4-202ENST00000340477 TARS2Q9BW92 718 aaKnown RBP21.05■□□□□ 0.96
SYNE4-202ENST00000340477 RNF39Q9H2S5 420 aa21.05■□□□□ 0.96
SYNE4-202ENST00000340477 TLR9Q9NR96 1032 aa21.05■□□□□ 0.96
SYNE4-202ENST00000340477 ANKFY1Q9P2R3 1169 aa21.05■□□□□ 0.96
SYNE4-202ENST00000340477 LZTS1Q9Y250 596 aa21.05■□□□□ 0.96
SYNE4-202ENST00000340477 USP20Q9Y2K6 914 aa21.05■□□□□ 0.96
SYNE4-202ENST00000340477 A0A087X0B3 334 aa21.04■□□□□ 0.96
SYNE4-202ENST00000340477 MYMKA6NI61 221 aa21.04■□□□□ 0.96
SYNE4-202ENST00000340477 HNRNPDLO14979 420 aaKnown RBP21.04■□□□□ 0.96
SYNE4-202ENST00000340477 INPPL1O15357 1258 aa21.04■□□□□ 0.96
SYNE4-202ENST00000340477 MCF2P10911 925 aa21.04■□□□□ 0.96
SYNE4-202ENST00000340477 LIG4P49917 911 aa21.04■□□□□ 0.96
SYNE4-202ENST00000340477 YARSP54577 528 aaKnown RBP21.04■□□□□ 0.96
SYNE4-202ENST00000340477 PLCB3Q01970 1234 aa21.04■□□□□ 0.96
SYNE4-202ENST00000340477 GRIK3Q13003 919 aa21.04■□□□□ 0.96
SYNE4-202ENST00000340477 TAS1R3Q7RTX0 852 aa21.04■□□□□ 0.96
SYNE4-202ENST00000340477 MICAL1Q8TDZ2 1067 aa21.04■□□□□ 0.96
SYNE4-202ENST00000340477 MRPS27Q92552 414 aaKnown RBP21.04■□□□□ 0.96
SYNE4-202ENST00000340477 TMEM175Q9BSA9 504 aa21.04■□□□□ 0.96
SYNE4-202ENST00000340477 NRDE2Q9H7Z3 1164 aa21.04■□□□□ 0.96
SYNE4-202ENST00000340477 TOPORSQ9NS56 1045 aaPredicted RBP21.04■□□□□ 0.96
SYNE4-202ENST00000340477 SNTG2Q9NY99 539 aa21.04■□□□□ 0.96
SYNE4-202ENST00000340477 THEGQ9P2T0 379 aa21.04■□□□□ 0.96
SYNE4-202ENST00000340477 STK39Q9UEW8 545 aa21.04■□□□□ 0.96
SYNE4-202ENST00000340477 COL6A3P12111 3177 aa21.04■□□□□ 0.96
SYNE4-202ENST00000340477 POLR2DO15514 142 aaKnown RBP21.03■□□□□ 0.96
SYNE4-202ENST00000340477 TOM1L1O75674 476 aa21.03■□□□□ 0.96
SYNE4-202ENST00000340477 RECQL4O94761 1208 aa21.03■□□□□ 0.96
SYNE4-202ENST00000340477 HARSP12081 509 aaKnown RBP21.03■□□□□ 0.96
SYNE4-202ENST00000340477 PBX3P40426 434 aa21.03■□□□□ 0.96
SYNE4-202ENST00000340477 SCNN1GP51170 649 aa21.03■□□□□ 0.96
SYNE4-202ENST00000340477 NOLC1Q14978 699 aaKnown RBP eCLIP21.03■□□□□ 0.96
SYNE4-202ENST00000340477 PDE12Q6L8Q7 609 aaKnown RBP21.03■□□□□ 0.96
SYNE4-202ENST00000340477 ZBTB33Q86T24 672 aa21.03■□□□□ 0.96
SYNE4-202ENST00000340477 SFR1Q86XK3 245 aa21.03■□□□□ 0.96
SYNE4-202ENST00000340477 CCDC65Q8IXS2 484 aa21.03■□□□□ 0.96
SYNE4-202ENST00000340477 CEP57L1Q8IYX8 460 aa21.03■□□□□ 0.96
SYNE4-202ENST00000340477 SLC39A11Q8N1S5 342 aa21.03■□□□□ 0.96
SYNE4-202ENST00000340477 ZFP42Q96MM3 310 aa21.03■□□□□ 0.96
SYNE4-202ENST00000340477 CDT1Q9H211 546 aa21.03■□□□□ 0.96
SYNE4-202ENST00000340477 MRPL44Q9H9J2 332 aaKnown RBP21.03■□□□□ 0.96
SYNE4-202ENST00000340477 ENTPD7Q9NQZ7 604 aa21.03■□□□□ 0.96
SYNE4-202ENST00000340477 KLK14Q9P0G3 267 aa21.03■□□□□ 0.96
SYNE4-202ENST00000340477 TBX20Q9UMR3 447 aa21.03■□□□□ 0.96
SYNE4-202ENST00000340477 GDAQ9Y2T3 454 aa21.03■□□□□ 0.96
SYNE4-202ENST00000340477 ATG2AQ2TAZ0 1938 aa21.03■□□□□ 0.96
SYNE4-202ENST00000340477 ALDH2P05091 517 aa21.02■□□□□ 0.96
SYNE4-202ENST00000340477 E2F4Q16254 413 aa21.02■□□□□ 0.96
SYNE4-202ENST00000340477 ADALQ6DHV7 355 aa21.02■□□□□ 0.96
SYNE4-202ENST00000340477 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.02■□□□□ 0.96
SYNE4-202ENST00000340477 KCNN1Q92952 543 aa21.02■□□□□ 0.96
SYNE4-202ENST00000340477 HVCN1Q96D96 273 aa21.02■□□□□ 0.96
SYNE4-202ENST00000340477 KCNH3Q9ULD8 1083 aa21.02■□□□□ 0.96
SYNE4-202ENST00000340477 COG5Q9UP83 839 aa21.02■□□□□ 0.96
SYNE4-202ENST00000340477 FAN1Q9Y2M0 1017 aa21.02■□□□□ 0.96
SYNE4-202ENST00000340477 CLDN3O15551 220 aa21.01■□□□□ 0.95
SYNE4-202ENST00000340477 NCK2O43639 380 aa21.01■□□□□ 0.95
SYNE4-202ENST00000340477 GALTP07902 379 aa21.01■□□□□ 0.95
SYNE4-202ENST00000340477 NMT1P30419 496 aaKnown RBP21.01■□□□□ 0.95
SYNE4-202ENST00000340477 GRM5P41594 1212 aa21.01■□□□□ 0.95
SYNE4-202ENST00000340477 OR1G1P47890 313 aa21.01■□□□□ 0.95
SYNE4-202ENST00000340477 ALCAMQ13740 583 aa21.01■□□□□ 0.95
SYNE4-202ENST00000340477 HERC4Q5GLZ8 1057 aaPredicted RBP21.01■□□□□ 0.95
SYNE4-202ENST00000340477 TCEAL5Q5H9L2 206 aa21.01■□□□□ 0.95
SYNE4-202ENST00000340477 STXBP4Q6ZWJ1 553 aa21.01■□□□□ 0.95
SYNE4-202ENST00000340477 ZNF280BQ86YH2 543 aa21.01■□□□□ 0.95
SYNE4-202ENST00000340477 DNAJC19Q96DA6 116 aa21.01■□□□□ 0.95
SYNE4-202ENST00000340477 ST6GALNAC4Q9H4F1 302 aa21.01■□□□□ 0.95
SYNE4-202ENST00000340477 PANK4Q9NVE7 773 aa21.01■□□□□ 0.95
SYNE4-202ENST00000340477 KBTBD4Q9NVX7 518 aa21.01■□□□□ 0.95
SYNE4-202ENST00000340477 DNAJB4Q9UDY4 337 aa21.01■□□□□ 0.95
SYNE4-202ENST00000340477 CITO14578 2027 aa21■□□□□ 0.95
SYNE4-202ENST00000340477 FSD2A1L4K1 749 aa21■□□□□ 0.95
SYNE4-202ENST00000340477 NT5C1B-RDH14C9J2C7 533 aa21■□□□□ 0.95
SYNE4-202ENST00000340477 PROZP22891 400 aa21■□□□□ 0.95
SYNE4-202ENST00000340477 CMA1P23946 247 aa21■□□□□ 0.95
SYNE4-202ENST00000340477 CA8P35219 290 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms