RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 SLC16A3O15427 465 aaKnown RBP12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 PHF2O75151 1096 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 EYA4O95677 639 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 NUDT17P0C025 328 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 RARAP10276 462 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 SH3BP5LQ7L8J4 393 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 TRPM8Q7Z2W7 1104 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 SLC47A2Q86VL8 602 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 SYCP3Q8IZU3 236 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 DYDC1Q8WWB3 177 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 ZBTB21Q9ULJ3 1066 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 ANKRD62A6NC57 917 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 SRRM3A6NNA2 597 aaPredicted RBP12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 RASGRF2O14827 1237 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 TP73O15350 636 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 NDUFB10O96000 172 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 CYP3A4P08684 503 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 CALRP27797 417 aaKnown RBP12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 SSTR3P32745 418 aaPredicted RBP12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 NPEPPSP55786 919 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 ICA1Q05084 483 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 RRP1BQ14684 758 aaKnown RBP12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 ZYXQ15942 572 aaKnown RBP12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 CNGA2Q16280 664 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 CCDC174Q6PII3 467 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 PIGWQ7Z7B1 504 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 FBXO11Q86XK2 927 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 SLF2Q8IX21 1173 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 LMO3Q8TAP4 145 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 AGAP11Q8TF27 550 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 ZSWIM1Q9BR11 485 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 AMNQ9BXJ7 453 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 CDC42EP4Q9H3Q1 356 aaKnown RBP12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 PARVGQ9HBI0 331 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 SLC12A4Q9UP95 1085 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 C10orf71Q711Q0 1435 aa12.85□□□□□ -0.35
CCDC144CP-201ENST00000340196 O00370 1275 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 CETPP11597 493 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 CHRNB2P17787 502 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 ECE1P42892 770 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 CLNS1AP54105 237 aaKnown RBP12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 CERKLQ49MI3 558 aaPredicted RBP12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 ZNF720Q7Z2F6 126 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 NOP9Q86U38 636 aaKnown RBP12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 CCDC125Q86Z20 511 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 HS6ST3Q8IZP7 471 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 CYP4X1Q8N118 509 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 DHX38Q92620 1227 aaKnown RBP12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 KDM4CQ9H3R0 1056 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 CNOT10Q9H9A5 744 aaKnown RBP12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 KCNK9Q9NPC2 374 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 AAASQ9NRG9 546 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 SAMD15Q9P1V8 674 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 FOCADQ5VW36 1801 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 IGLV3-22A0A075B6J6 115 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 A0A1W2PRG0 241 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 TMEM120BA0PK00 339 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 CCDC169A6NNP5 214 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 CYP26A1O43174 497 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 DNAJC8O75937 253 aaPredicted RBP12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 SREBF1P36956 1147 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 ALDH5A1P51649 535 aaPredicted RBP12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 EIF3BP55884 814 aaKnown RBP12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 BFSP1Q12934 665 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 NAA25Q14CX7 972 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 HP1BP3Q5SSJ5 553 aaPredicted RBP12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 NUGGCQ68CJ6 796 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 NSMCE1Q8WV22 266 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 PGM2Q96G03 612 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 RMDN2Q96LZ7 410 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 HSD17B14Q9BPX1 270 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 PDGFDQ9GZP0 370 aaPredicted RBP12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 CHST7Q9NS84 486 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 INTUQ9ULD6 942 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 TTC7AQ9ULT0 858 aaPredicted RBP12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 FRMD4BQ9Y2L6 1034 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 KIF13BQ9NQT8 1826 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 IGF2BP3O00425 579 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 SPOPO43791 374 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 HLA-DOAP06340 250 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 ARP10275 920 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 PEX5P50542 639 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 CCNHP51946 323 aaPredicted RBP12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 NCALDP61601 193 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 RNASELQ05823 741 aaKnown RBP12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 Q4G0T1 1027 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 CC2D2BQ6DHV5 1058 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 OTOP1Q7RTM1 612 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 PODNQ7Z5L7 613 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 DAW1Q8N136 415 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 ANKS4BQ8N8V4 417 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 OLFML3Q9NRN5 406 aa12.84□□□□□ -0.35
CCDC144CP-201ENST00000340196 KRT16P08779 473 aa12.83□□□□□ -0.36
CCDC144CP-201ENST00000340196 EZRP15311 586 aaKnown RBP12.83□□□□□ -0.36
CCDC144CP-201ENST00000340196 GBP2P32456 591 aaPredicted RBP12.83□□□□□ -0.36
CCDC144CP-201ENST00000340196 KYNUQ16719 465 aa12.83□□□□□ -0.36
CCDC144CP-201ENST00000340196 FAM182AQ5T1J6 154 aa12.83□□□□□ -0.36
CCDC144CP-201ENST00000340196 FAM47EQ6ZV65 393 aa12.83□□□□□ -0.36
CCDC144CP-201ENST00000340196 HS2ST1Q7LGA3 356 aa12.83□□□□□ -0.36
CCDC144CP-201ENST00000340196 PPM1KQ8N3J5 372 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms