RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 ERGIC2Q96RQ1 377 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 MSTO1Q9BUK6 570 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 SEZ6LQ9BYH1 1024 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 CELF4Q9BZC1 486 aaKnown RBP8.53□□□□□ -1.04
TMC1-202ENST00000340019 IMPACTQ9P2X3 320 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 GINS2Q9Y248 185 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 ANK1P16157 1881 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 B4GALT4O60513 344 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 LDHAP00338 332 aaKnown RBP8.53□□□□□ -1.04
TMC1-202ENST00000340019 CHRNA1P02708 482 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 HOXA11P31270 313 aaPredicted RBP8.53□□□□□ -1.04
TMC1-202ENST00000340019 TBX2Q13207 712 aaPredicted RBP8.53□□□□□ -1.04
TMC1-202ENST00000340019 C1orf220Q5T0J3 134 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 EEF1DP3Q658K8 133 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 TMC6Q7Z403 805 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 RSPH3Q86UC2 560 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 DRC7Q8IY82 874 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 U2AF1L4Q8WU68 220 aaKnown RBP8.53□□□□□ -1.04
TMC1-202ENST00000340019 FAM213AQ9BRX8 229 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 SENP6Q9GZR1 1112 aaPredicted RBP8.53□□□□□ -1.04
TMC1-202ENST00000340019 PDZD7Q9H5P4 517 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 CDY2AQ9Y6F7 541 aa8.53□□□□□ -1.04
TMC1-202ENST00000340019 MKI67P46013 3256 aaKnown RBP8.53□□□□□ -1.04
TMC1-202ENST00000340019 ERLIN2O94905 339 aa8.52□□□□□ -1.04
TMC1-202ENST00000340019 AFPP02771 609 aaKnown RBP8.52□□□□□ -1.04
TMC1-202ENST00000340019 FGFR4P22455 802 aa8.52□□□□□ -1.04
TMC1-202ENST00000340019 VAMP7P51809 220 aa8.52□□□□□ -1.04
TMC1-202ENST00000340019 DLG4P78352 724 aa8.52□□□□□ -1.04
TMC1-202ENST00000340019 CLDN10P78369 228 aa8.52□□□□□ -1.04
TMC1-202ENST00000340019 CYP24A1Q07973 514 aa8.52□□□□□ -1.04
TMC1-202ENST00000340019 NOLC1Q14978 699 aaKnown RBP eCLIP8.52□□□□□ -1.04
TMC1-202ENST00000340019 DCAF17Q5H9S7 520 aaPredicted RBP8.52□□□□□ -1.04
TMC1-202ENST00000340019 ZBTB41Q5SVQ8 909 aa8.52□□□□□ -1.04
TMC1-202ENST00000340019 CCDC155Q8N6L0 562 aa8.52□□□□□ -1.04
TMC1-202ENST00000340019 CPB2Q96IY4 423 aa8.52□□□□□ -1.04
TMC1-202ENST00000340019 CDT1Q9H211 546 aa8.52□□□□□ -1.04
TMC1-202ENST00000340019 SIK3Q9Y2K2 1263 aa8.52□□□□□ -1.04
TMC1-202ENST00000340019 TRPV2Q9Y5S1 764 aa8.52□□□□□ -1.04
TMC1-202ENST00000340019 ZNF233A6NK53 670 aa8.52□□□□□ -1.05
TMC1-202ENST00000340019 ACOT2P49753 483 aa8.52□□□□□ -1.05
TMC1-202ENST00000340019 KCNMA1Q12791 1236 aa8.52□□□□□ -1.05
TMC1-202ENST00000340019 ZNF568Q3ZCX4 644 aa8.52□□□□□ -1.05
TMC1-202ENST00000340019 FAM26DQ5JW98 314 aa8.52□□□□□ -1.05
TMC1-202ENST00000340019 FKBP15Q5T1M5 1219 aa8.52□□□□□ -1.05
TMC1-202ENST00000340019 ZBTB33Q86T24 672 aa8.52□□□□□ -1.05
TMC1-202ENST00000340019 PARD3BQ8TEW8 1205 aa8.52□□□□□ -1.05
TMC1-202ENST00000340019 TCHPQ9BT92 498 aa8.52□□□□□ -1.05
TMC1-202ENST00000340019 TRPV6Q9H1D0 765 aa8.52□□□□□ -1.05
TMC1-202ENST00000340019 AGPAT5Q9NUQ2 364 aa8.52□□□□□ -1.05
TMC1-202ENST00000340019 PES1O00541 588 aaKnown RBP8.52□□□□□ -1.05
TMC1-202ENST00000340019 OGTO15294 1046 aa8.52□□□□□ -1.05
TMC1-202ENST00000340019 CAND2O75155 1236 aa8.52□□□□□ -1.05
TMC1-202ENST00000340019 MCF2P10911 925 aa8.52□□□□□ -1.05
TMC1-202ENST00000340019 KRT13P13646 458 aa8.52□□□□□ -1.05
TMC1-202ENST00000340019 SFPQP23246 707 aaKnown RBP eCLIP8.52□□□□□ -1.05
TMC1-202ENST00000340019 WNT7BP56706 349 aa8.52□□□□□ -1.05
TMC1-202ENST00000340019 HSP90AA2PQ14568 343 aaPredicted RBP8.52□□□□□ -1.05
TMC1-202ENST00000340019 SYCP1Q15431 976 aa8.52□□□□□ -1.05
TMC1-202ENST00000340019 CDR2LQ86X02 465 aaPredicted RBP8.52□□□□□ -1.05
TMC1-202ENST00000340019 FAM126BQ8IXS8 530 aa8.52□□□□□ -1.05
TMC1-202ENST00000340019 TMC2Q8TDI7 906 aa8.52□□□□□ -1.05
TMC1-202ENST00000340019 CPSF3Q9UKF6 684 aaKnown RBP8.52□□□□□ -1.05
TMC1-202ENST00000340019 GTPBP10A4D1E9 387 aaKnown RBP8.51□□□□□ -1.05
TMC1-202ENST00000340019 M0QZ92 97 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 CD4P01730 458 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 TRIM49P0CI25 452 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 TRIM49CP0CI26 452 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 COL6A1P12109 1028 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 AXLP30530 894 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 THPOP40225 353 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 TNFSF9P41273 254 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 MATR3P43243 847 aaKnown RBP eCLIP8.51□□□□□ -1.05
TMC1-202ENST00000340019 GJA8P48165 433 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 FMO5P49326 533 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 KLK7P49862 253 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 PPP3CAQ08209 521 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 RBL2Q08999 1139 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 PSMD6Q15008 389 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 CBWD6Q4V339 395 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 SEZ6Q53EL9 994 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 CBWD3Q5JTY5 395 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 CBWD5Q5RIA9 395 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 TCERG1LQ5VWI1 586 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 TRAF7Q6Q0C0 670 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 CATSPER4Q7RTX7 472 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 FAM228AQ86W67 206 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 TTYH3Q9C0H2 523 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 NOD1Q9Y239 953 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 NOC2LQ9Y3T9 749 aaKnown RBP8.51□□□□□ -1.05
TMC1-202ENST00000340019 LRRIQ3A6PVS8 624 aaPredicted RBP8.51□□□□□ -1.05
TMC1-202ENST00000340019 GOLGA6L6A8MZA4 724 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 PMM2O15305 246 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 GYPCP04921 128 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 CTSHP09668 335 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 DPY19L2P1Q6NXN4 242 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 CCDC186Q7Z3E2 898 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 BRSK2Q8IWQ3 736 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 CEP120Q8N960 986 aa8.51□□□□□ -1.05
TMC1-202ENST00000340019 RBAKQ9NYW8 714 aaPredicted RBP8.51□□□□□ -1.05
TMC1-202ENST00000340019 CITO14578 2027 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms