RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CTDP1Q9Y5B0 961 aaPredicted RBP10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 PCDHGA8Q9Y5G5 932 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 TLL2Q9Y6L7 1015 aa10.29□□□□□ -0.76
PTCHD4-201ENST00000339488 PFASO15067 1338 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 FOXP2O15409 715 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 RNF113AO15541 343 aaKnown RBP10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 SLC26A4O43511 780 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 KCNQ3O43525 872 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 SPAG7O75391 227 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 NUDT17P0C025 328 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 CYP2C9P11712 490 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 KCNA2P16389 499 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 AQP4P55087 323 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 KRT72Q14CN4 511 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 NONOQ15233 471 aaKnown RBP eCLIP10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 PROSER3Q2NL68 480 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 CLEC4GQ6UXB4 293 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 NLRP10Q86W26 655 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 COL23A1Q86Y22 540 aaPredicted RBP10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 VPS52Q8N1B4 723 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 Q8N9G6 341 aaPredicted RBP10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 MAML3Q96JK9 1138 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 PRICKLE1Q96MT3 831 aaPredicted RBP10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 NEURL2Q9BR09 285 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 DSCC1Q9BVC3 393 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 CCDC68Q9H2F9 335 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 SLAIN2Q9P270 581 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 ZNF335Q9H4Z2 1342 aaPredicted RBP10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 H3BSA7 217 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 MMP1P03956 469 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 ANPEPP15144 967 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 PIP4K2AP48426 406 aaPredicted RBP10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 AIMP1Q12904 312 aaKnown RBP10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 STK4Q13043 487 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 SF3B4Q15427 424 aaKnown RBP eCLIP10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 TNNI3KQ59H18 835 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 MDH1BQ5I0G3 518 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 C6orf118Q5T5N4 469 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 OGFOD2Q6N063 350 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 FBXL19Q6PCT2 694 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 TAOK1Q7L7X3 1001 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 SRRM1Q8IYB3 904 aaKnown RBP10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 KBTBD3Q8NAB2 608 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 OSBP2Q969R2 916 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 ERP44Q9BS26 406 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 SPZ1Q9BXG8 430 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 ERVK-5Q9HDB9 667 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 ZDHHC18Q9NUE0 388 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 TBCCD1Q9NVR7 557 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 DKK3Q9UBP4 350 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 SAP30BPQ9UHR5 308 aaKnown RBP10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 FPGT-TNNI3KV9GXZ4 949 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 A0A1B0GTW7 788 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 SMIM31A0A1B0GVY4 71 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 IQCA1LA6NCM1 817 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 C2orf71A6NGG8 1288 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 SPECC1L-ADORA2AF8WAN1 911 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 WDR46O15213 610 aaKnown RBP10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 GYG2O15488 501 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 PJA2O43164 708 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 TPPPO94811 219 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 TFAP2AP05549 437 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 RXRBP28702 533 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 KLRC3Q07444 240 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 OVGP1Q12889 678 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 PRKG1Q13976 671 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 GK3PQ14409 553 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 CCDC153Q494R4 210 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 APOA5Q6Q788 366 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 ZDHHC24Q6UX98 284 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 GALNT4Q8N4A0 578 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 FBXO27Q8NI29 283 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 ACTRT2Q8TDY3 377 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 GLT8D2Q9H1C3 349 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 KANSL2Q9H9L4 492 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 IL1RAPL1Q9NZN1 696 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 GPSM3Q9Y4H4 160 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 MAD1L1Q9Y6D9 718 aa10.28□□□□□ -0.76
PTCHD4-201ENST00000339488 MAP3K15Q6ZN16 1313 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 NOTOA8MTQ0 251 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 TMX2-CTNND1H3BSU7 103 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 K7EPI3 171 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 BIRC5O15392 142 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 TEX28O15482 410 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 GSC2O15499 205 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 DDHD2O94830 711 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 FGAP02671 866 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 DDX5P17844 614 aaKnown RBP10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 EEF1GP26641 437 aaKnown RBP10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 ZNF211Q13398 564 aaPredicted RBP10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 CRY1Q16526 586 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 DEPDC1Q5TB30 811 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 ACAD11Q709F0 780 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 FASTKD5Q7L8L6 764 aaKnown RBP10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 ADSSL1Q8N142 457 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 C12orf50Q8NA57 414 aaPredicted RBP10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 HELBQ8NG08 1087 aaPredicted RBP10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 METTL14Q9HCE5 456 aaKnown RBP10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 NPHS2Q9NP85 383 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms