RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 GPD1LQ8N335 351 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 TRIM58Q8NG06 486 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 SLC30A5Q8TAD4 765 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 AFAP1L1Q8TED9 768 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 TMEM174Q8WUU8 243 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 AFG1LQ8WV93 481 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 UBE2Q2Q8WVN8 375 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 LENG1Q96BZ8 264 aaPredicted RBP8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 TSGA10Q9BZW7 698 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 PDCL3Q9H2J4 239 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 AGO2Q9UKV8 859 aaKnown RBP8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 SNX12Q9UMY4 172 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 TRPC6Q9Y210 931 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 JRKLQ9Y4A0 524 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 B4GALT5O43286 388 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 SSTR3P32745 418 aaPredicted RBP8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 NOP2P46087 812 aaKnown RBP8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 GALCP54803 685 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 OSTNP61366 133 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 ARHGAP1Q07960 439 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 GPR142Q7Z601 462 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 DPP9Q86TI2 863 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 CEP120Q8N960 986 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 OR5B17Q8NGF7 314 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 NPLOC4Q8TAT6 608 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 HELQQ8TDG4 1101 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 GOLGA1Q92805 767 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 ARHGEF26Q96DR7 871 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 NLRP4Q96MN2 994 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 NOX5Q96PH1 765 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 PCDHB18PQ96TA0 734 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 NENFQ9UMX5 172 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 SCN4AP35499 1836 aa8.01□□□□□ -1.13
SRFBP1-201ENST00000339397 CTAGE15A4D2H0 777 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 MSCO60682 206 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 LGR5O75473 907 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 CTAGE8P0CG41 777 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 TNNI1P19237 187 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 NAMPTP43490 491 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 HUNKP57058 714 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 CBX1P83916 185 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 C2orf54Q08AI8 447 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 STRN3Q13033 797 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 TTLL4Q14679 1199 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 TDRD10Q5VZ19 366 aaKnown RBP8□□□□□ -1.13
SRFBP1-201ENST00000339397 FAM160B1Q5W0V3 765 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 KRT39Q6A163 491 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 NOP9Q86U38 636 aaKnown RBP8□□□□□ -1.13
SRFBP1-201ENST00000339397 CTAGE6Q86UF2 777 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 CTAGE4Q8IX94 777 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 C2orf69Q8N8R5 385 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 MORC4Q8TE76 937 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 ATP8B4Q8TF62 1192 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 HDAC7Q8WUI4 952 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 PSPC1Q8WXF1 523 aaKnown RBP8□□□□□ -1.13
SRFBP1-201ENST00000339397 OSBPL9Q96SU4 736 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 KATNBL1Q9H079 304 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 RAB20Q9NX57 234 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 CGNQ9P2M7 1197 aaKnown RBP8□□□□□ -1.13
SRFBP1-201ENST00000339397 PNMA3Q9UL41 463 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 ZNF233A6NK53 670 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 IGF2BP3O00425 579 aaKnown RBP eCLIP8□□□□□ -1.13
SRFBP1-201ENST00000339397 ADCY3O60266 1144 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 ITGBL1O95965 494 aaPredicted RBP8□□□□□ -1.13
SRFBP1-201ENST00000339397 INSRRP14616 1297 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 FERP16591 822 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 CHRNB2P17787 502 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 WHAMMP3Q1A5X7 153 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 C2CD6Q53TS8 623 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 EFCAB12Q6NXP0 572 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8□□□□□ -1.13
SRFBP1-201ENST00000339397 TMEM192Q8IY95 271 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 CEP112Q8N8E3 955 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 FBXL13Q8NEE6 735 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 SCFD2Q8WU76 684 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 FAM212AQ96EL1 285 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 MSTO1Q9BUK6 570 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 MAF1Q9H063 256 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 THAP2Q9H0W7 228 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 TMEM8AQ9HCN3 771 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 CDKN2AIPQ9NXV6 580 aaPredicted RBP8□□□□□ -1.13
SRFBP1-201ENST00000339397 BZW2Q9Y6E2 419 aaKnown RBP8□□□□□ -1.13
SRFBP1-201ENST00000339397 UMODL1Q5DID0 1318 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 A0A0B4J269 797 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 ATMINO43313 823 aaPredicted RBP8□□□□□ -1.13
SRFBP1-201ENST00000339397 RRP9O43818 475 aaKnown RBP8□□□□□ -1.13
SRFBP1-201ENST00000339397 SASH3O75995 380 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 VNN1O95497 513 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 CST3P01034 146 aaPredicted RBP8□□□□□ -1.13
SRFBP1-201ENST00000339397 MMEP08473 750 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 SMPD1P17405 629 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 GARTP22102 1010 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 VSNL1P62760 191 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 GPR161Q8N6U8 529 aaKnown RBP8□□□□□ -1.13
SRFBP1-201ENST00000339397 SLC17A8Q8NDX2 589 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 RABGGTAQ92696 567 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 ZIC5Q96T25 663 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 TCHPQ9BT92 498 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 ST7Q9NRC1 585 aa8□□□□□ -1.13
SRFBP1-201ENST00000339397 SUCLA2Q9P2R7 463 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms