RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 DDAH1O94760 285 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 PGM3O95394 542 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 PENKP01210 267 aaPredicted RBP9.91□□□□□ -0.82
RPGR-202ENST00000339363 SERPING1P05155 500 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 KRT15P19012 456 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 IL6STP40189 918 aaPredicted RBP9.91□□□□□ -0.82
RPGR-202ENST00000339363 EIF6P56537 245 aaKnown RBP9.91□□□□□ -0.82
RPGR-202ENST00000339363 MED21Q13503 144 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 SHROOM1Q2M3G4 852 aaPredicted RBP9.91□□□□□ -0.82
RPGR-202ENST00000339363 CENPPQ6IPU0 288 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 PIP4K2CQ8TBX8 421 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 COA7Q96BR5 231 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 TRIM11Q96F44 468 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 PGM2Q96G03 612 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 FNBP1Q96RU3 617 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 MPHOSPH6Q99547 160 aaKnown RBP9.91□□□□□ -0.82
RPGR-202ENST00000339363 TRAIPQ9BWF2 469 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 NDE1Q9NXR1 346 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 MYH1P12882 1939 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 DLEC1Q9Y238 1755 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 A0A0G2JND7 137 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 P4HA2O15460 535 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 ESRRAP11474 423 aaPredicted RBP9.91□□□□□ -0.82
RPGR-202ENST00000339363 ATP6V1B1P15313 513 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 VCAM1P19320 739 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 CCR3P51677 355 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 CCNG1P51959 295 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 RCAN1P53805 252 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 NAB2Q15742 525 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 ARL6IP4Q66PJ3 421 aaKnown RBP9.91□□□□□ -0.82
RPGR-202ENST00000339363 GJB7Q6PEY0 223 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 COL23A1Q86Y22 540 aaPredicted RBP9.91□□□□□ -0.82
RPGR-202ENST00000339363 TBCKQ8TEA7 893 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 TMEM47Q9BQJ4 181 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 ASIC3Q9UHC3 531 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 TRAF3IP3Q9Y228 551 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 LZTS1Q9Y250 596 aa9.91□□□□□ -0.82
RPGR-202ENST00000339363 TMA7Q9Y2S6 64 aaKnown RBP9.91□□□□□ -0.82
RPGR-202ENST00000339363 FRMPD2Q68DX3 1309 aaPredicted RBP9.9□□□□□ -0.82
RPGR-202ENST00000339363 BOLA2-SMG1P6H3BVE0 249 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 CASP5P51878 434 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 MAN2A1Q16706 1144 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 FOXB2Q5VYV0 432 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 ECHDC2Q86YB7 292 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 CYP4X1Q8N118 509 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 MTA3Q9BTC8 594 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 ASCC2Q9H1I8 757 aaPredicted RBP9.9□□□□□ -0.82
RPGR-202ENST00000339363 MYH7BA7E2Y1 1941 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 KIAA1551Q9HCM1 1747 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 MAGEB3O15480 346 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 THAP12O43422 761 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 NDUFB5O43674 189 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 SPAG7O75391 227 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 STAMBPO95630 424 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 ZBTB48P10074 688 aaPredicted RBP9.9□□□□□ -0.82
RPGR-202ENST00000339363 HNRNPH3P31942 346 aaKnown RBP9.9□□□□□ -0.82
RPGR-202ENST00000339363 AMPD3Q01432 767 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 DSG1Q02413 1049 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 PARP6Q2NL67 630 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 PDXDC1Q6P996 788 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 HIPK4Q8NE63 616 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 RUNDC3BQ96NL0 473 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 PHF12Q96QT6 1004 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 TUBGCP5Q96RT8 1024 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 PIGSQ96S52 555 aa9.9□□□□□ -0.82
RPGR-202ENST00000339363 RANBP17Q9H2T7 1088 aaKnown RBP9.9□□□□□ -0.82
RPGR-202ENST00000339363 CHORDC1Q9UHD1 332 aaPredicted RBP9.9□□□□□ -0.82
RPGR-202ENST00000339363 ARHGAP42A6NI28 874 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 RAD21O60216 631 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 TRPA1O75762 1119 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 STK10O94804 968 aaKnown RBP9.89□□□□□ -0.83
RPGR-202ENST00000339363 LCA5LO95447 670 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 PLCG2P16885 1265 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 NFKBIAP25963 317 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 POLGP54098 1239 aaPredicted RBP9.89□□□□□ -0.83
RPGR-202ENST00000339363 INHBCP55103 352 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 CDK17Q00537 523 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 TMED2Q15363 201 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 TAF1BQ53T94 588 aaPredicted RBP9.89□□□□□ -0.83
RPGR-202ENST00000339363 LMBRD2Q68DH5 695 aaPredicted RBP9.89□□□□□ -0.83
RPGR-202ENST00000339363 AADACL2Q6P093 401 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 U2AF1L4Q8WU68 220 aaKnown RBP9.89□□□□□ -0.83
RPGR-202ENST00000339363 NAT14Q8WUY8 206 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 CASP10Q92851 521 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 CCSER1Q9C0I3 900 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 NDEL1Q9GZM8 345 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 UBN1Q9NPG3 1134 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 BARHL2Q9NY43 387 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 DOLKQ9UPQ8 538 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.89□□□□□ -0.83
RPGR-202ENST00000339363 LDHAP00338 332 aaKnown RBP9.89□□□□□ -0.83
RPGR-202ENST00000339363 GH1P01241 217 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 CREB1P16220 341 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 DMPKQ09013 629 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 MKRN3Q13064 507 aaKnown RBP9.89□□□□□ -0.83
RPGR-202ENST00000339363 PPP2R5CQ13362 524 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 PLS1Q14651 629 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 UBE2SQ16763 222 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 CAPN12Q6ZSI9 719 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 TSHZ1Q6ZSZ6 1077 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms