RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 SIKE1Q9BRV8 207 aa13.48□□□□□ -0.25
DFFB-202ENST00000339350 IKZF4Q9H2S9 585 aa13.48□□□□□ -0.25
DFFB-202ENST00000339350 STK17AQ9UEE5 414 aa13.48□□□□□ -0.25
DFFB-202ENST00000339350 DDX25Q9UHL0 483 aaKnown RBP13.48□□□□□ -0.25
DFFB-202ENST00000339350 SSU72P8A0A1W2PR75 194 aa13.48□□□□□ -0.25
DFFB-202ENST00000339350 MAGEA13PA6NCF6 341 aa13.48□□□□□ -0.25
DFFB-202ENST00000339350 ASLP04424 464 aa13.48□□□□□ -0.25
DFFB-202ENST00000339350 ITGA4P13612 1032 aa13.48□□□□□ -0.25
DFFB-202ENST00000339350 CHN1P15882 459 aa13.48□□□□□ -0.25
DFFB-202ENST00000339350 GM2AP17900 193 aa13.48□□□□□ -0.25
DFFB-202ENST00000339350 PPP1R2P41236 205 aa13.48□□□□□ -0.25
DFFB-202ENST00000339350 BNIP1Q12981 228 aa13.48□□□□□ -0.25
DFFB-202ENST00000339350 ASIC2Q16515 512 aa13.48□□□□□ -0.25
DFFB-202ENST00000339350 SLC18A3Q16572 532 aa13.48□□□□□ -0.25
DFFB-202ENST00000339350 THOC7Q6I9Y2 204 aaKnown RBP13.48□□□□□ -0.25
DFFB-202ENST00000339350 LRIG3Q6UXM1 1119 aa13.48□□□□□ -0.25
DFFB-202ENST00000339350 KCTD1Q719H9 257 aa13.48□□□□□ -0.25
DFFB-202ENST00000339350 UBLCP1Q8WVY7 318 aaPredicted RBP13.48□□□□□ -0.25
DFFB-202ENST00000339350 NCSTNQ92542 709 aa13.48□□□□□ -0.25
DFFB-202ENST00000339350 HAS1Q92839 578 aa13.48□□□□□ -0.25
DFFB-202ENST00000339350 LENG1Q96BZ8 264 aaPredicted RBP13.48□□□□□ -0.25
DFFB-202ENST00000339350 SELENOSQ9BQE4 189 aa13.48□□□□□ -0.25
DFFB-202ENST00000339350 RTFDC1Q9BY42 306 aaPredicted RBP13.48□□□□□ -0.25
DFFB-202ENST00000339350 SLC4A7Q9Y6M7 1214 aa13.48□□□□□ -0.25
DFFB-202ENST00000339350 BTAF1O14981 1849 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 LAMB2P55268 1798 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 USP17L15C9J2P7 530 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 USP17L13C9JLJ4 530 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 USP17L11C9JVI0 530 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 USP17L18D6R9N7 530 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 USP17L22D6RA61 530 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 USP17L17D6RBQ6 530 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 USP17L19D6RCP7 530 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 USP17L20D6RJB6 530 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 PPP1R11O60927 126 aaPredicted RBP13.47□□□□□ -0.25
DFFB-202ENST00000339350 WFS1O76024 890 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 SERPINB2P05120 415 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 ZCCHC18P0CG32 403 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 COPB2P35606 906 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 USP17L24Q0WX57 530 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 USP17L6PQ6QN14 398 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 GPBP1Q86WP2 473 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.47□□□□□ -0.25
DFFB-202ENST00000339350 UTP4Q969X6 686 aaKnown RBP13.47□□□□□ -0.25
DFFB-202ENST00000339350 TCHPQ9BT92 498 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 CELF4Q9BZC1 486 aaKnown RBP13.47□□□□□ -0.25
DFFB-202ENST00000339350 DPH5Q9H2P9 285 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 NMRK1Q9NWW6 199 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 CYP39A1Q9NYL5 469 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 SUCLA2Q9P2R7 463 aaPredicted RBP13.47□□□□□ -0.25
DFFB-202ENST00000339350 HTR3EA5X5Y0 456 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 TJP3O95049 919 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 UBTFL6P0CB48 400 aaPredicted RBP13.47□□□□□ -0.25
DFFB-202ENST00000339350 BCRP11274 1271 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 GYS1P13807 737 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 TAL1P17542 331 aaPredicted RBP13.47□□□□□ -0.25
DFFB-202ENST00000339350 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.25
DFFB-202ENST00000339350 PDE6CP51160 858 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 KCNH2Q12809 1159 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 KRT71Q3SY84 523 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 GALNTL6Q49A17 601 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 ZNF571Q7Z3V5 609 aaPredicted RBP13.47□□□□□ -0.25
DFFB-202ENST00000339350 PIAS4Q8N2W9 510 aaPredicted RBP13.47□□□□□ -0.25
DFFB-202ENST00000339350 USP38Q8NB14 1042 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 NEDD1Q8NHV4 660 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 BHMTQ93088 406 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 MPHOSPH6Q99547 160 aaKnown RBP13.47□□□□□ -0.25
DFFB-202ENST00000339350 PCDHA12Q9UN75 941 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 HEY1Q9Y5J3 304 aa13.47□□□□□ -0.25
DFFB-202ENST00000339350 NVLO15381 856 aaKnown RBP13.46□□□□□ -0.25
DFFB-202ENST00000339350 ATP9BO43861 1147 aa13.46□□□□□ -0.25
DFFB-202ENST00000339350 AKR1B1P15121 316 aa13.46□□□□□ -0.25
DFFB-202ENST00000339350 IFNAR2P48551 515 aa13.46□□□□□ -0.25
DFFB-202ENST00000339350 GRAPQ13588 217 aa13.46□□□□□ -0.25
DFFB-202ENST00000339350 RPS6KA1Q15418 735 aa13.46□□□□□ -0.25
DFFB-202ENST00000339350 DPP8Q6V1X1 898 aaPredicted RBP13.46□□□□□ -0.25
DFFB-202ENST00000339350 SLC30A10Q6XR72 485 aa13.46□□□□□ -0.25
DFFB-202ENST00000339350 ASRGL1Q7L266 308 aa13.46□□□□□ -0.25
DFFB-202ENST00000339350 MAP7D3Q8IWC1 876 aa13.46□□□□□ -0.25
DFFB-202ENST00000339350 RBBP8NLQ8NC74 664 aaPredicted RBP13.46□□□□□ -0.25
DFFB-202ENST00000339350 GRAPLQ8TC17 118 aaPredicted RBP13.46□□□□□ -0.25
DFFB-202ENST00000339350 PIGOQ8TEQ8 1089 aa13.46□□□□□ -0.25
DFFB-202ENST00000339350 SCFD1Q8WVM8 642 aa13.46□□□□□ -0.25
DFFB-202ENST00000339350 DNAJC1Q96KC8 554 aaKnown RBP13.46□□□□□ -0.25
DFFB-202ENST00000339350 HAPLN3Q96S86 360 aa13.46□□□□□ -0.25
DFFB-202ENST00000339350 CTTNBP2NLQ9P2B4 639 aa13.46□□□□□ -0.25
DFFB-202ENST00000339350 AMACRQ9UHK6 382 aa13.46□□□□□ -0.25
DFFB-202ENST00000339350 CROTQ9UKG9 612 aa13.46□□□□□ -0.25
DFFB-202ENST00000339350 LRCH1Q9Y2L9 728 aa13.46□□□□□ -0.25
DFFB-202ENST00000339350 RREB1Q92766 1687 aa13.46□□□□□ -0.25
DFFB-202ENST00000339350 COL5A3P25940 1745 aaPredicted RBP13.46□□□□□ -0.25
DFFB-202ENST00000339350 MYH7BA7E2Y1 1941 aa13.46□□□□□ -0.25
DFFB-202ENST00000339350 POTEFA5A3E0 1075 aa13.46□□□□□ -0.26
DFFB-202ENST00000339350 UNCXA6NJT0 531 aa13.46□□□□□ -0.26
DFFB-202ENST00000339350 POTEIP0CG38 1075 aa13.46□□□□□ -0.26
DFFB-202ENST00000339350 SNAP25P60880 206 aa13.46□□□□□ -0.26
DFFB-202ENST00000339350 ITGA7Q13683 1181 aa13.46□□□□□ -0.26
DFFB-202ENST00000339350 ZCWPW2Q504Y3 356 aa13.46□□□□□ -0.26
DFFB-202ENST00000339350 POTEGQ6S5H5 508 aa13.46□□□□□ -0.26
DFFB-202ENST00000339350 POTEEQ6S8J3 1075 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms