RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 TNNC1P63316 161 aa14.02□□□□□ -0.16
CDK5RAP1-201ENST00000339269 CYP24A1Q07973 514 aa14.02□□□□□ -0.16
CDK5RAP1-201ENST00000339269 HSP90B2PQ58FF3 399 aa14.02□□□□□ -0.16
CDK5RAP1-201ENST00000339269 SH3D19Q5HYK7 790 aa14.02□□□□□ -0.16
CDK5RAP1-201ENST00000339269 RPUSD2Q8IZ73 545 aaKnown RBP14.02□□□□□ -0.16
CDK5RAP1-201ENST00000339269 SYCE1Q8N0S2 351 aa14.02□□□□□ -0.16
CDK5RAP1-201ENST00000339269 IQCKQ8N0W5 287 aa14.02□□□□□ -0.16
CDK5RAP1-201ENST00000339269 TAS1R2Q8TE23 839 aa14.02□□□□□ -0.16
CDK5RAP1-201ENST00000339269 ALG3Q92685 438 aa14.02□□□□□ -0.16
CDK5RAP1-201ENST00000339269 CCDC43Q96MW1 224 aaKnown RBP14.02□□□□□ -0.16
CDK5RAP1-201ENST00000339269 NEUROG2Q9H2A3 272 aa14.02□□□□□ -0.16
CDK5RAP1-201ENST00000339269 ACAD9Q9H845 621 aa14.02□□□□□ -0.16
CDK5RAP1-201ENST00000339269 KMT5AQ9NQR1 393 aa14.02□□□□□ -0.16
CDK5RAP1-201ENST00000339269 SLC9A2Q9UBY0 812 aa14.02□□□□□ -0.16
CDK5RAP1-201ENST00000339269 SNCAIPQ9Y6H5 919 aa14.02□□□□□ -0.16
CDK5RAP1-201ENST00000339269 GPC3P51654 580 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 HNRNPH2P55795 449 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 RTP1P59025 263 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 FMO1Q01740 532 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 PAK2Q13177 524 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 PRPF4BQ13523 1007 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 TTMPQ5BVD1 217 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 SLC47A2Q86VL8 602 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CPNE8Q86YQ8 564 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 FMNL3Q8IVF7 1028 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 TMC2Q8TDI7 906 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 LMBR1Q8WVP7 490 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CTNNBL1Q8WYA6 563 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 DDX1Q92499 740 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ATP6V0A1Q93050 837 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CCDC127Q96BQ5 260 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CYP26B1Q9NR63 512 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 A0A0G2JMZ2 1700 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 MYPNQ86TC9 1320 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 SYNGAP1Q96PV0 1343 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CYP26A1O43174 497 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 SART1O43290 800 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 USP2O75604 605 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ATG7O95352 703 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 FTLP02792 175 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 PSAPP07602 524 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 SUPT20HL2P0C7V6 817 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CCDC172P0C7W6 258 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CNTN2Q02246 1040 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 SP4Q02446 784 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 SUPT20HL1Q3ZLR7 823 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 C15orf39Q6ZRI6 1047 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 SEC14L1Q92503 715 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 KCNN1Q92952 543 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ARL8AQ96BM9 186 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ZIM3Q96PE6 472 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 HAPLN2Q9GZV7 340 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 DDX47Q9H0S4 455 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ZNF408Q9H9D4 720 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 C17orf75Q9HAS0 396 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 TMEM8AQ9HCN3 771 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CHORDC1Q9UHD1 332 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 AMFRQ9UKV5 643 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 EXOC7Q9UPT5 735 aa14.01□□□□□ -0.17
CDK5RAP1-201ENST00000339269 RPS6KA5O75582 802 aa14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 DGAT1O75907 488 aa14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 MTA2O94776 668 aa14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CLSTN1O94985 981 aa14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 EDN1P05305 212 aa14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 HSPA6P17066 643 aa14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ICAM3P32942 547 aa14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 MARCKSL1P49006 195 aa14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 TREML2Q5T2D2 321 aa14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 KRT39Q6A163 491 aa14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 SV2AQ7L0J3 742 aa14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 OTUD6AQ7L8S5 288 aa14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ASAP3Q8TDY4 903 aa14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 IFT81Q8WYA0 676 aa14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ZNF516Q92618 1163 aa14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 DHX38Q92620 1227 aaKnown RBP14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 TATDN2Q93075 761 aa14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 VTI1AQ96AJ9 217 aa14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 POLR3FQ9H1D9 316 aaPredicted RBP14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 R3HDMLQ9H3Y0 253 aa14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 SEPT9Q9UHD8 586 aaPredicted RBP14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 TCEAL9Q9UHQ7 104 aa14□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ZNF233A6NK53 670 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 MMEP08473 750 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 HSPA9P38646 679 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 APLP1P51693 650 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 SMTNP53814 917 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 TAF3Q5VWG9 929 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ALS2CLQ60I27 953 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 C11orf63Q6NUN7 778 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 DDX42Q86XP3 938 aaKnown RBP eCLIP13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ZDHHC14Q8IZN3 488 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 EIF1ADQ8N9N8 165 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 AFAP1L1Q8TED9 768 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 KRT35Q92764 455 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CD101Q93033 1021 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 PCYT2Q99447 389 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ERVK-5Q9HDB9 667 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 SEPT11Q9NVA2 429 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 BTBD7Q9P203 1132 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 MAFBQ9Y5Q3 323 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms