RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 STX12Q86Y82 276 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 LZTR1Q8N653 840 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 LINC00469Q8N7U9 141 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 FRS2Q8WU20 508 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 PRCCQ92733 491 aaPredicted RBP4.4□□□□□ -1.7
NEDD4-201ENST00000338963 RRN3Q9NYV6 651 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 A0A1W2PQJ5 194 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 RNASEH2AO75792 299 aaKnown RBP4.4□□□□□ -1.7
NEDD4-201ENST00000338963 KRT16P08779 473 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 CDK4P11802 303 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 JAK1P23458 1154 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 PBX1P40424 430 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 SARSP49591 514 aaKnown RBP4.4□□□□□ -1.7
NEDD4-201ENST00000338963 SRP54P61011 504 aaKnown RBP4.4□□□□□ -1.7
NEDD4-201ENST00000338963 POLR2FP61218 127 aaKnown RBP4.4□□□□□ -1.7
NEDD4-201ENST00000338963 RASSF7Q02833 373 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 EDRF1Q3B7T1 1238 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 PLA2G4EQ3MJ16 856 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 CAPN12Q6ZSI9 719 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 MIGA2Q7L4E1 593 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 GSPT2Q8IYD1 628 aaKnown RBP4.4□□□□□ -1.7
NEDD4-201ENST00000338963 KIAA2013Q8IYS2 634 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 SYCE1Q8N0S2 351 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 NECAB1Q8N987 351 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 ZNF317Q96PQ6 595 aaPredicted RBP4.4□□□□□ -1.7
NEDD4-201ENST00000338963 YME1L1Q96TA2 773 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 ITSN2Q9NZM3 1697 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 ILVBLA1L0T0 632 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 ADCY6O43306 1168 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 POLR2CP19387 275 aaPredicted RBP4.4□□□□□ -1.7
NEDD4-201ENST00000338963 CHKAP35790 457 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 NDUFA8P51970 172 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 IST1P53990 364 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 PDE1CQ14123 709 aaPredicted RBP4.4□□□□□ -1.7
NEDD4-201ENST00000338963 C16orf72Q14CZ0 275 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 SLC15A2Q16348 729 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 APOA5Q6Q788 366 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 CORO6Q6QEF8 472 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 HSPH1Q92598 858 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 CLIP3Q96DZ5 547 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 THAP11Q96EK4 314 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 SERPINB12Q96P63 405 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 KRT12Q99456 494 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 DPH5Q9H2P9 285 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 ZFP69BQ9UJL9 534 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 ANKARQ7Z5J8 1434 aa4.4□□□□□ -1.7
NEDD4-201ENST00000338963 EXTL3O43909 919 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 GPC4O75487 556 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 ANXA13P27216 316 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 MTHFSP49914 203 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 DNM2P50570 870 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 B2MP61769 119 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 PRKG1Q13976 671 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 ACAP1Q15027 740 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 CCDC58Q4VC31 144 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 C4orf46Q504U0 113 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 C4orf50Q6ZRC1 276 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 GALNT7Q86SF2 657 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 UCMAQ8WVF2 138 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 MAP4K1Q92918 833 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.4□□□□□ -1.71
NEDD4-201ENST00000338963 SLC39A1Q9NY26 324 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 GMIPQ9P107 970 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 ADD3Q9UEY8 706 aaKnown RBP4.4□□□□□ -1.71
NEDD4-201ENST00000338963 STARD13Q9Y3M8 1113 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 RBM8AQ9Y5S9 174 aaKnown RBP4.4□□□□□ -1.71
NEDD4-201ENST00000338963 PNPLA7Q6ZV29 1317 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 H0Y3Z8 333 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 BET1O15155 118 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 NCAM2O15394 837 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 NTRK1P04629 796 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 IFIT2P09913 472 aaKnown RBP4.4□□□□□ -1.71
NEDD4-201ENST00000338963 RARGP13631 454 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 TUBP50607 506 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 RPS3AP61247 264 aaKnown RBP4.4□□□□□ -1.71
NEDD4-201ENST00000338963 CHRNEQ04844 493 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 ZBTB16Q05516 673 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 MTFR1Q15390 333 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 MOGQ16653 247 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 QPCTQ16769 361 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 FIGNQ5HY92 759 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 KIF6Q6ZMV9 814 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 HORMAD1Q86X24 394 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 TREML1Q86YW5 311 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 CCNJLQ8IV13 435 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 C16orf71Q8IYS4 520 aaPredicted RBP4.4□□□□□ -1.71
NEDD4-201ENST00000338963 KIF2BQ8N4N8 673 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 ICA1LQ8NDH6 482 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 MDM1Q8TC05 714 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 OTUD7AQ8TE49 926 aaPredicted RBP4.4□□□□□ -1.71
NEDD4-201ENST00000338963 ZNF274Q96GC6 653 aaPredicted RBP4.4□□□□□ -1.71
NEDD4-201ENST00000338963 PCMTD1Q96MG8 357 aaPredicted RBP4.4□□□□□ -1.71
NEDD4-201ENST00000338963 HEPHQ9BQS7 1158 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 KCNN3Q9UGI6 736 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 FBXL5Q9UKA1 691 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 NUP50Q9UKX7 468 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 SALL3Q9BXA9 1300 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 USP42Q9H9J4 1324 aaKnown RBP4.4□□□□□ -1.71
NEDD4-201ENST00000338963 KIF28PB7ZC32 967 aa4.4□□□□□ -1.71
NEDD4-201ENST00000338963 H3BRJ5 948 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms