RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SCYL2Q6P3W7 929 aa14.08□□□□□ -0.16
COL2A1-201ENST00000337299 ZNF571Q7Z3V5 609 aaPredicted RBP14.08□□□□□ -0.16
COL2A1-201ENST00000337299 PPM1NQ8N819 430 aa14.08□□□□□ -0.16
COL2A1-201ENST00000337299 SLC30A5Q8TAD4 765 aa14.08□□□□□ -0.16
COL2A1-201ENST00000337299 TTC8Q8TAM2 541 aa14.08□□□□□ -0.16
COL2A1-201ENST00000337299 FAM81AQ8TBF8 368 aa14.08□□□□□ -0.16
COL2A1-201ENST00000337299 LOC100653049A0A140TA62 436 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 XPO1O14980 1071 aaKnown RBP14.07□□□□□ -0.16
COL2A1-201ENST00000337299 KRT34O76011 436 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 MFAP3P55082 362 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 MRPS9P82933 396 aaKnown RBP14.07□□□□□ -0.16
COL2A1-201ENST00000337299 ARHGAP4P98171 946 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 CDK17Q00537 523 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 HIC1Q14526 733 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 STAT4Q14765 748 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 KPNB1Q14974 876 aaKnown RBP14.07□□□□□ -0.16
COL2A1-201ENST00000337299 KCTD21Q4G0X4 260 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 MYLK4Q86YV6 388 aaPredicted RBP14.07□□□□□ -0.16
COL2A1-201ENST00000337299 CD302Q8IX05 232 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 SIKE1Q9BRV8 207 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 SMYD2Q9NRG4 433 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 FAM237AA0A1B0GTK4 181 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 PDE5AO76074 875 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 PCP11498 1178 aaKnown RBP14.07□□□□□ -0.16
COL2A1-201ENST00000337299 NR1H3Q13133 447 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 ACTRT1Q8TDG2 376 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 TNS3Q68CZ2 1445 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 AGLP35573 1532 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 CD163L1Q9NR16 1453 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 H0YIN7 160 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 NSL1Q96IY1 281 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 MPP4Q96JB8 637 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 BTBD6Q96KE9 485 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 TMEM47Q9BQJ4 181 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 THAP2Q9H0W7 228 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 MAGED2Q9UNF1 606 aaPredicted RBP14.07□□□□□ -0.16
COL2A1-201ENST00000337299 ERVV-1B6SEH8 477 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 USP17L15C9J2P7 530 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 USP17L13C9JLJ4 530 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 USP17L11C9JVI0 530 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 USP17L18D6R9N7 530 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 USP17L22D6RA61 530 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 USP17L17D6RBQ6 530 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 USP17L19D6RCP7 530 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 USP17L20D6RJB6 530 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 SERPINB2P05120 415 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 TMED10P49755 219 aaKnown RBP14.07□□□□□ -0.16
COL2A1-201ENST00000337299 USP17L24Q0WX57 530 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 USP17L6PQ6QN14 398 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 WDR75Q8IWA0 830 aaKnown RBP14.07□□□□□ -0.16
COL2A1-201ENST00000337299 DCLK2Q8N568 766 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 CELF1Q92879 486 aaKnown RBP14.07□□□□□ -0.16
COL2A1-201ENST00000337299 GORASP1Q9BQQ3 440 aa14.07□□□□□ -0.16
COL2A1-201ENST00000337299 ROPN1BQ9BZX4 212 aaPredicted RBP14.07□□□□□ -0.16
COL2A1-201ENST00000337299 ROPN1Q9HAT0 212 aaPredicted RBP14.07□□□□□ -0.16
COL2A1-201ENST00000337299 TRPC5Q9UL62 973 aaPredicted RBP14.07□□□□□ -0.16
COL2A1-201ENST00000337299 PRDX5P30044 214 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 PCYT1AP49585 367 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 PSMC1P62191 440 aaKnown RBP14.06□□□□□ -0.16
COL2A1-201ENST00000337299 IYDQ6PHW0 289 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 PPP4R3CPQ6ZMV5 832 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 ARL10Q8N8L6 244 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 CALN1Q9BXU9 219 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 O00370 1275 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 DSG1Q02413 1049 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 APOBEC2Q9Y235 224 aaKnown RBP14.06□□□□□ -0.16
COL2A1-201ENST00000337299 WNT7AO00755 349 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 GIPC1O14908 333 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 MGRN1O60291 552 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 RARGP13631 454 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 CD58P19256 250 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 POLGP54098 1239 aaPredicted RBP14.06□□□□□ -0.16
COL2A1-201ENST00000337299 MECOMQ03112 1051 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 P3H1Q32P28 736 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 SH3RF1Q7Z6J0 888 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 SLFN12Q8IYM2 578 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 ACAP3Q96P50 834 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 BARHL2Q9NY43 387 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 SALL4Q9UJQ4 1053 aa14.06□□□□□ -0.16
COL2A1-201ENST00000337299 IQANK1A0A1B0GTG1 560 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 ZNF189O75820 626 aaPredicted RBP14.05□□□□□ -0.16
COL2A1-201ENST00000337299 CHRM1P11229 460 aaPredicted RBP14.05□□□□□ -0.16
COL2A1-201ENST00000337299 ICA1Q05084 483 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 FAM102BQ5T8I3 360 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 CWF19L1Q69YN2 538 aaKnown RBP14.05□□□□□ -0.16
COL2A1-201ENST00000337299 IRF2BP1Q8IU81 584 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 MREGQ8N565 214 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 C11orf70Q9BRQ4 267 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 TBC1D10AQ9BXI6 508 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 KBTBD4Q9NVX7 518 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 CYP39A1Q9NYL5 469 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 GJA3Q9Y6H8 435 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 MYOM1P52179 1685 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 SEC24DO94855 1032 aaPredicted RBP14.05□□□□□ -0.16
COL2A1-201ENST00000337299 SNAP25P60880 206 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 PRAMEP78395 509 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 BLMHQ13867 455 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 ANKRD20A4Q4UJ75 823 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 WLSQ5T9L3 541 aa14.05□□□□□ -0.16
COL2A1-201ENST00000337299 ATG16L1Q676U5 607 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms