RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 ZNF653Q96CK0 615 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 SYT11Q9BT88 431 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 TEX13BQ9BXU2 312 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 CYP26B1Q9NR63 512 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 FZD9O00144 591 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 HSF2BPO75031 334 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 SRGAP2CP0DJJ0 459 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 LIG4P49917 911 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 JAK3P52333 1124 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 NCKAP1LP55160 1127 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 TNNC1P63316 161 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 CFAP58Q5T655 872 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 ZDHHC14Q8IZN3 488 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 COPS5Q92905 334 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 EXOC4Q96A65 974 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.54□□□□□ -0.88
SNCA-201ENST00000336904 MTFR1LQ9H019 292 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 ACAD9Q9H845 621 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 KCND2Q9NZV8 630 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 TSKSQ9UJT2 592 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 PLAAQ9Y263 795 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 STXBP5LQ9Y2K9 1186 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 SSC5DA1L4H1 1573 aa9.54□□□□□ -0.88
SNCA-201ENST00000336904 TRIM66O15016 1216 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 DDX3YO15523 660 aaKnown RBP9.53□□□□□ -0.88
SNCA-201ENST00000336904 STBD1O95210 358 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 ZBTB48P10074 688 aaPredicted RBP9.53□□□□□ -0.88
SNCA-201ENST00000336904 MAPTP10636 758 aaKnown RBP9.53□□□□□ -0.88
SNCA-201ENST00000336904 MCM3P25205 808 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 ECHS1P30084 290 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 TNFSF9P41273 254 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 VPS41P49754 854 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 CETN1Q12798 172 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 ORC1Q13415 861 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 EMC2Q15006 297 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 TRIP13Q15645 432 aaPredicted RBP9.53□□□□□ -0.88
SNCA-201ENST00000336904 CEP85LQ5SZL2 805 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 LRRC31Q6UY01 552 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 CATSPERGQ6ZRH7 1159 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 ZNF572Q7Z3I7 529 aaPredicted RBP9.53□□□□□ -0.88
SNCA-201ENST00000336904 PRUNE1Q86TP1 453 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 NEK9Q8TD19 979 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 PIK3R5Q8WYR1 880 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 NUP85Q9BW27 656 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 GDF3Q9NR23 364 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 FBXO40Q9UH90 709 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 SNX24Q9Y343 169 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 DCDC2CA8MYV0 355 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 IRF6O14896 467 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 PSAPP07602 524 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 SSR1P43307 286 aaKnown RBP9.53□□□□□ -0.88
SNCA-201ENST00000336904 FMO1Q01740 532 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 GUCY1A3Q02108 690 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 FAM76AQ8TAV0 307 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 GOLGA5Q8TBA6 731 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 GPRC5DQ9NZD1 345 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 SPOPO43791 374 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 USP2O75604 605 aaPredicted RBP9.53□□□□□ -0.88
SNCA-201ENST00000336904 TMEM253P0C7T8 217 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 CYP11B1P15538 503 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 CD58P19256 250 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 TUBB4BP68371 445 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 IGBP1P78318 339 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 CYP24A1Q07973 514 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 PAK2Q13177 524 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 NNTQ13423 1086 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 KIF22Q14807 665 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 KRT39Q6A163 491 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 SCARA5Q6ZMJ2 495 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 LEKR1Q6ZMV7 388 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 MAP4K3Q8IVH8 894 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 HELQQ8TDG4 1101 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 SLC16A10Q8TF71 515 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 ATG4AQ8WYN0 398 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 ACSF2Q96CM8 615 aaPredicted RBP9.53□□□□□ -0.88
SNCA-201ENST00000336904 HES6Q96HZ4 224 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 TCHPQ9BT92 498 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 AS3MTQ9HBK9 375 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 MED4Q9NPJ6 270 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 RAB20Q9NX57 234 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 NOCTQ9UK39 431 aaKnown RBP9.53□□□□□ -0.88
SNCA-201ENST00000336904 FBXL5Q9UKA1 691 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 ATP8A1Q9Y2Q0 1164 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 AFG3L2Q9Y4W6 797 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 CD2APQ9Y5K6 639 aa9.53□□□□□ -0.88
SNCA-201ENST00000336904 ARIH2O95376 493 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 PYGMP11217 842 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 PSMC4P43686 418 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 AARSP49588 968 aaKnown RBP eCLIP9.52□□□□□ -0.89
SNCA-201ENST00000336904 GNGT1P63211 74 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 PPATQ06203 517 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 UAP1Q16222 522 aaPredicted RBP9.52□□□□□ -0.89
SNCA-201ENST00000336904 SLC9A9Q8IVB4 645 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 OR5B17Q8NGF7 314 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 SCFD2Q8WU76 684 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 ATP6V0A1Q93050 837 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 HEMGNQ9BXL5 484 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 ZNF408Q9H9D4 720 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 ATP6V0A4Q9HBG4 840 aa9.52□□□□□ -0.89
SNCA-201ENST00000336904 ZNF302Q9NR11 478 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms