RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 PEX26Q7Z412 305 aa13.6□□□□□ -0.23
LIMK1-201ENST00000336180 PRRT2Q7Z6L0 340 aaPredicted RBP13.6□□□□□ -0.23
LIMK1-201ENST00000336180 VPS36Q86VN1 386 aa13.6□□□□□ -0.23
LIMK1-201ENST00000336180 DDX42Q86XP3 938 aaKnown RBP eCLIP13.6□□□□□ -0.23
LIMK1-201ENST00000336180 CEP120Q8N960 986 aa13.6□□□□□ -0.23
LIMK1-201ENST00000336180 PRPF31Q8WWY3 499 aaKnown RBP13.6□□□□□ -0.23
LIMK1-201ENST00000336180 SLC10A4Q96EP9 437 aa13.6□□□□□ -0.23
LIMK1-201ENST00000336180 SPATA33Q96N06 139 aa13.6□□□□□ -0.23
LIMK1-201ENST00000336180 TRIM31Q9BZY9 425 aa13.6□□□□□ -0.23
LIMK1-201ENST00000336180 TRPC6Q9Y210 931 aa13.6□□□□□ -0.23
LIMK1-201ENST00000336180 GUCY2FP51841 1108 aa13.59□□□□□ -0.23
LIMK1-201ENST00000336180 PPP2R5AQ15172 486 aa13.59□□□□□ -0.23
LIMK1-201ENST00000336180 RPS6KA1Q15418 735 aa13.59□□□□□ -0.23
LIMK1-201ENST00000336180 RHPN2Q8IUC4 686 aa13.59□□□□□ -0.23
LIMK1-201ENST00000336180 MSANTD4Q8NCY6 345 aa13.59□□□□□ -0.23
LIMK1-201ENST00000336180 CHST13Q8NET6 341 aa13.59□□□□□ -0.23
LIMK1-201ENST00000336180 TPCN2Q8NHX9 752 aa13.59□□□□□ -0.23
LIMK1-201ENST00000336180 FGD4Q96M96 766 aa13.59□□□□□ -0.23
LIMK1-201ENST00000336180 NR2E1Q9Y466 385 aa13.59□□□□□ -0.23
LIMK1-201ENST00000336180 MCM3APO60318 1980 aa13.59□□□□□ -0.23
LIMK1-201ENST00000336180 ANO9A1A5B4 782 aa13.59□□□□□ -0.23
LIMK1-201ENST00000336180 GJB6O95452 261 aa13.59□□□□□ -0.23
LIMK1-201ENST00000336180 CKAP4Q07065 602 aaKnown RBP13.59□□□□□ -0.23
LIMK1-201ENST00000336180 OR5B17Q8NGF7 314 aa13.59□□□□□ -0.23
LIMK1-201ENST00000336180 TAF4BQ92750 862 aa13.59□□□□□ -0.23
LIMK1-201ENST00000336180 KIFAP3Q92845 792 aa13.59□□□□□ -0.23
LIMK1-201ENST00000336180 TRIM7Q9C029 511 aa13.59□□□□□ -0.23
LIMK1-201ENST00000336180 LUC7LQ9NQ29 371 aaKnown RBP13.59□□□□□ -0.23
LIMK1-201ENST00000336180 CTTNBP2NLQ9P2B4 639 aa13.59□□□□□ -0.23
LIMK1-201ENST00000336180 PPP2R3BQ9Y5P8 575 aa13.59□□□□□ -0.23
LIMK1-201ENST00000336180 CCDC151A5D8V7 595 aa13.58□□□□□ -0.23
LIMK1-201ENST00000336180 SOCS7O14512 581 aa13.58□□□□□ -0.23
LIMK1-201ENST00000336180 B4GALT5O43286 388 aa13.58□□□□□ -0.23
LIMK1-201ENST00000336180 TXNP10599 105 aaKnown RBP13.58□□□□□ -0.23
LIMK1-201ENST00000336180 CYP24A1Q07973 514 aa13.58□□□□□ -0.23
LIMK1-201ENST00000336180 STRN3Q13033 797 aa13.58□□□□□ -0.23
LIMK1-201ENST00000336180 CAPSQ13938 189 aa13.58□□□□□ -0.23
LIMK1-201ENST00000336180 MESDQ14696 234 aa13.58□□□□□ -0.23
LIMK1-201ENST00000336180 CASP8Q14790 479 aa13.58□□□□□ -0.23
LIMK1-201ENST00000336180 MEI1Q5TIA1 1274 aa13.58□□□□□ -0.23
LIMK1-201ENST00000336180 THNSL1Q8IYQ7 743 aa13.58□□□□□ -0.23
LIMK1-201ENST00000336180 RNF149Q8NC42 400 aa13.58□□□□□ -0.23
LIMK1-201ENST00000336180 AGPAT1Q99943 283 aa13.58□□□□□ -0.23
LIMK1-201ENST00000336180 DDX47Q9H0S4 455 aaKnown RBP13.58□□□□□ -0.23
LIMK1-201ENST00000336180 ATP2A1O14983 1001 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 GLI1P08151 1106 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 ZNF286BP0CG31 522 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 GUCY2DQ02846 1103 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 CETN1Q12798 172 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 ORC1Q13415 861 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 SCARA5Q6ZMJ2 495 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 SND1Q7KZF4 910 aaKnown RBP eCLIP13.58□□□□□ -0.24
LIMK1-201ENST00000336180 CTNNBL1Q8WYA6 563 aaPredicted RBP13.58□□□□□ -0.24
LIMK1-201ENST00000336180 CDHR1Q96JP9 859 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 FNBP1Q96RU3 617 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 MSTO1Q9BUK6 570 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 EXOC7Q9UPT5 735 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 PAPPA2Q9BXP8 1791 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 UBE4BO95155 1302 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 SPDYE5A6NIY4 337 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 CAPN2P17655 700 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 PPATQ06203 517 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 GRM1Q13255 1194 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 SLC9A9Q8IVB4 645 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 GPD1LQ8N335 351 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 LENG1Q96BZ8 264 aaPredicted RBP13.58□□□□□ -0.24
LIMK1-201ENST00000336180 AZI2Q9H6S1 392 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 AGO2Q9UKV8 859 aaKnown RBP13.58□□□□□ -0.24
LIMK1-201ENST00000336180 AGTPBP1Q9UPW5 1226 aa13.58□□□□□ -0.24
LIMK1-201ENST00000336180 TCP1P17987 556 aaKnown RBP13.57□□□□□ -0.24
LIMK1-201ENST00000336180 CD58P19256 250 aa13.57□□□□□ -0.24
LIMK1-201ENST00000336180 PRKCIP41743 596 aa13.57□□□□□ -0.24
LIMK1-201ENST00000336180 TMEM62Q0P6H9 643 aa13.57□□□□□ -0.24
LIMK1-201ENST00000336180 MOGSQ13724 837 aa13.57□□□□□ -0.24
LIMK1-201ENST00000336180 KRT39Q6A163 491 aa13.57□□□□□ -0.24
LIMK1-201ENST00000336180 C8orf74Q6P047 294 aa13.57□□□□□ -0.24
LIMK1-201ENST00000336180 ZNF662Q6ZS27 426 aa13.57□□□□□ -0.24
LIMK1-201ENST00000336180 MCPH1Q8NEM0 835 aa13.57□□□□□ -0.24
LIMK1-201ENST00000336180 CPA5Q8WXQ8 436 aa13.57□□□□□ -0.24
LIMK1-201ENST00000336180 CELF4Q9BZC1 486 aaKnown RBP13.57□□□□□ -0.24
LIMK1-201ENST00000336180 RNPEPQ9H4A4 650 aa13.57□□□□□ -0.24
LIMK1-201ENST00000336180 PDLIM7Q9NR12 457 aa13.57□□□□□ -0.24
LIMK1-201ENST00000336180 RAB20Q9NX57 234 aa13.57□□□□□ -0.24
LIMK1-201ENST00000336180 KIF4AO95239 1232 aa13.57□□□□□ -0.24
LIMK1-201ENST00000336180 CHRNB2P17787 502 aa13.57□□□□□ -0.24
LIMK1-201ENST00000336180 GJC1P36383 396 aa13.57□□□□□ -0.24
LIMK1-201ENST00000336180 CARSP49589 748 aaKnown RBP13.57□□□□□ -0.24
LIMK1-201ENST00000336180 GPAT2Q6NUI2 795 aa13.57□□□□□ -0.24
LIMK1-201ENST00000336180 TAF1DQ9H5J8 278 aaPredicted RBP13.57□□□□□ -0.24
LIMK1-201ENST00000336180 EPB41L5Q9HCM4 733 aa13.57□□□□□ -0.24
LIMK1-201ENST00000336180 L1RE1Q9UN81 338 aa13.57□□□□□ -0.24
LIMK1-201ENST00000336180 MAFBQ9Y5Q3 323 aaPredicted RBP13.57□□□□□ -0.24
LIMK1-201ENST00000336180 PARP14Q460N5 1801 aa13.57□□□□□ -0.24
LIMK1-201ENST00000336180 GTPBP10A4D1E9 387 aaKnown RBP13.56□□□□□ -0.24
LIMK1-201ENST00000336180 INO80B-WBP1J3KQ70 363 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 MAFGO15525 162 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 FAM153BP0C7A2 387 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 FGFR4P22455 802 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 BRD3Q15059 726 aa13.56□□□□□ -0.24
LIMK1-201ENST00000336180 FAM153CQ494X1 144 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms