RNA–Protein interactions for RNA: ENST00000335922.9

FGFR1-202, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 4,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-202ENST00000335922 LIN9Q5TKA1 542 aa15.62■□□□□ 0.09
FGFR1-202ENST00000335922 TNFRSF25Q93038 417 aa15.62■□□□□ 0.09
FGFR1-202ENST00000335922 RNF25Q96BH1 459 aaPredicted RBP15.62■□□□□ 0.09
FGFR1-202ENST00000335922 TMX2Q9Y320 296 aa15.62■□□□□ 0.09
FGFR1-202ENST00000335922 PCDHA10Q9Y5I2 948 aa15.62■□□□□ 0.09
FGFR1-202ENST00000335922 ONECUT3O60422 494 aaPredicted RBP15.62■□□□□ 0.09
FGFR1-202ENST00000335922 SPAG7O75391 227 aa15.62■□□□□ 0.09
FGFR1-202ENST00000335922 AKAP3O75969 853 aa15.62■□□□□ 0.09
FGFR1-202ENST00000335922 RNASELQ05823 741 aaKnown RBP15.62■□□□□ 0.09
FGFR1-202ENST00000335922 NPY5RQ15761 445 aa15.62■□□□□ 0.09
FGFR1-202ENST00000335922 SYCP2LQ5T4T6 812 aa15.62■□□□□ 0.09
FGFR1-202ENST00000335922 CCDC62Q6P9F0 684 aa15.62■□□□□ 0.09
FGFR1-202ENST00000335922 SDCCAG8Q86SQ7 713 aaPredicted RBP15.62■□□□□ 0.09
FGFR1-202ENST00000335922 NT5C1BQ96P26 610 aa15.62■□□□□ 0.09
FGFR1-202ENST00000335922 ARL1P40616 181 aaPredicted RBP15.62■□□□□ 0.09
FGFR1-202ENST00000335922 SMAD1Q15797 465 aaKnown RBP15.62■□□□□ 0.09
FGFR1-202ENST00000335922 FAM163AQ96GL9 167 aaPredicted RBP15.62■□□□□ 0.09
FGFR1-202ENST00000335922 C9orf72Q96LT7 481 aa15.62■□□□□ 0.09
FGFR1-202ENST00000335922 RILPQ96NA2 401 aa15.62■□□□□ 0.09
FGFR1-202ENST00000335922 THAP2Q9H0W7 228 aa15.62■□□□□ 0.09
FGFR1-202ENST00000335922 ZFYVE28Q9HCC9 887 aa15.62■□□□□ 0.09
FGFR1-202ENST00000335922 JPH1Q9HDC5 661 aaPredicted RBP15.62■□□□□ 0.09
FGFR1-202ENST00000335922 SLC9A2Q9UBY0 812 aa15.62■□□□□ 0.09
FGFR1-202ENST00000335922 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.62■□□□□ 0.09
FGFR1-202ENST00000335922 AKAP12Q02952 1782 aa15.62■□□□□ 0.09
FGFR1-202ENST00000335922 NFIBO00712 420 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 ATP2A2P16615 1042 aaKnown RBP15.61■□□□□ 0.09
FGFR1-202ENST00000335922 CD58P19256 250 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 SOX5P35711 763 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 PPP4R3CPQ6ZMV5 832 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 RAB3IL1Q8TBN0 382 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 RFFLQ8WZ73 363 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 CNOT8Q9UFF9 292 aaKnown RBP15.61■□□□□ 0.09
FGFR1-202ENST00000335922 SIK3Q9Y2K2 1263 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 ZNF233A6NK53 670 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 CAND2O75155 1236 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 CIB2O75838 187 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 PIK3CAP42336 1068 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 CASP5P51878 434 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 RASIP1Q5U651 963 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 MFSD14CQ5VZR4 134 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 AADACL2Q6P093 401 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 PARP9Q8IXQ6 854 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 UPF1Q92900 1129 aaKnown RBP eCLIP15.61■□□□□ 0.095e-8■■■■□ 26.6
FGFR1-202ENST00000335922 RUSC1Q9BVN2 902 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 SLC40A1Q9NP59 571 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 INPP5FQ9Y2H2 1132 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 CLDN3O15551 220 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 CLUL1Q15846 466 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 CFAP157Q5JU67 520 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 ALG13Q9NP73 1137 aaKnown RBP15.61■□□□□ 0.09
FGFR1-202ENST00000335922 TCP11X1B4DZS4 312 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 BRAFP15056 766 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 PON1P27169 355 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 PPM1FP49593 454 aaPredicted RBP15.61■□□□□ 0.09
FGFR1-202ENST00000335922 STAT5BP51692 787 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 TPCN2Q8NHX9 752 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 FBXO25Q8TCJ0 367 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 NUP85Q9BW27 656 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 IDI2Q9BXS1 227 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 COMMD10Q9Y6G5 202 aa15.61■□□□□ 0.09
FGFR1-202ENST00000335922 ASB14A6NK59 587 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 FAM107AO95990 144 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 HOXD10P28358 340 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 C7orf31Q8N865 590 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 PSPC1Q8WXF1 523 aaKnown RBP15.6■□□□□ 0.09
FGFR1-202ENST00000335922 RAPGEF5Q92565 580 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 C18orf8Q96DM3 657 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 CDCA5Q96FF9 252 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 TSNARE1Q96NA8 513 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 ISCUQ9H1K1 167 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 VCXQ9H320 206 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 ACTR5Q9H9F9 607 aaPredicted RBP15.6■□□□□ 0.09
FGFR1-202ENST00000335922 PRKAG2Q9UGJ0 569 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 ALG6Q9Y672 507 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 DENND3A2RUS2 1198 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 YDJCA8MPS7 323 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 CYP2C8P10632 490 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 CA4P22748 312 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 FXR2P51116 673 aaKnown RBP eCLIP15.6■□□□□ 0.09
FGFR1-202ENST00000335922 KCNMA1Q12791 1236 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 PPP2R5EQ16537 467 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 SHROOM1Q2M3G4 852 aaPredicted RBP15.6■□□□□ 0.09
FGFR1-202ENST00000335922 KIAA1755Q5JYT7 1200 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 C11orf70Q9BRQ4 267 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 MED10Q9BTT4 135 aa15.6■□□□□ 0.09
FGFR1-202ENST00000335922 MMTAG2Q9BU76 263 aaKnown RBP15.6■□□□□ 0.09
FGFR1-202ENST00000335922 PI4K2BG5E9Z4 385 aa15.59■□□□□ 0.09
FGFR1-202ENST00000335922 SMIM24O75264 130 aa15.59■□□□□ 0.09
FGFR1-202ENST00000335922 PSMC5P62195 406 aa15.59■□□□□ 0.09
FGFR1-202ENST00000335922 TMEM62Q0P6H9 643 aa15.59■□□□□ 0.09
FGFR1-202ENST00000335922 TWF2Q6IBS0 349 aaKnown RBP15.59■□□□□ 0.09
FGFR1-202ENST00000335922 SCARA5Q6ZMJ2 495 aa15.59■□□□□ 0.09
FGFR1-202ENST00000335922 C4orf32Q8N8J7 132 aa15.59■□□□□ 0.09
FGFR1-202ENST00000335922 CCDC89Q8N998 374 aa15.59■□□□□ 0.09
FGFR1-202ENST00000335922 OR6J1Q8NGC5 347 aa15.59■□□□□ 0.09
FGFR1-202ENST00000335922 ZNF564Q8TBZ8 553 aaPredicted RBP15.59■□□□□ 0.09
FGFR1-202ENST00000335922 EPS8L3Q8TE67 593 aaKnown RBP15.59■□□□□ 0.09
FGFR1-202ENST00000335922 MSTO1Q9BUK6 570 aa15.59■□□□□ 0.09
FGFR1-202ENST00000335922 EDEM3Q9BZQ6 932 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms