RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 REXO1L1PQ8IX06 675 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 C4orf19Q8IY42 314 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 FAM186BQ8IYM0 893 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 MSTO1Q9BUK6 570 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 MORF4L1Q9UBU8 362 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 SPATA31C2B4DYI2 1134 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 EML1O00423 815 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 HMGCRP04035 888 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 PSMC2P35998 433 aaKnown RBP12.7□□□□□ -0.38
HDAC6-201ENST00000334136 ZNF484Q5JVG2 852 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 SESTD1Q86VW0 696 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 C17orf102A2RUQ5 167 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 ASAP2O43150 1006 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 EFNA5P52803 228 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 ATN1P54259 1190 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-201ENST00000334136 PPP2R5CQ13362 524 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 TRIM68Q6AZZ1 485 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 GPAT2Q6NUI2 795 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 SYT2Q8N9I0 419 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-201ENST00000334136 MTMR9Q96QG7 549 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 MTG1Q9BT17 334 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-201ENST00000334136 KCNMB3Q9NPA1 279 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 TFR2Q9UP52 801 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 NRXN2Q9P2S2 1712 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 LOC102724159A0A0B4J2E5 919 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 ZNF185O15231 689 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 KLRC1P26715 233 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 NMT1P30419 496 aaKnown RBP12.69□□□□□ -0.38
HDAC6-201ENST00000334136 KCNJ6P48051 423 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 KIF11P52732 1056 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 MRPS9P82933 396 aaKnown RBP12.69□□□□□ -0.38
HDAC6-201ENST00000334136 MTMR3Q13615 1198 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 PWP2Q15269 919 aaKnown RBP12.69□□□□□ -0.38
HDAC6-201ENST00000334136 HAS1Q92839 578 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 NAP1L3Q99457 506 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-201ENST00000334136 DIS3Q9Y2L1 958 aaKnown RBP12.69□□□□□ -0.38
HDAC6-201ENST00000334136 ATP8A1Q9Y2Q0 1164 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 GOLGA8IPA6NC78 632 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 GOLGA8JA6NMD2 632 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 XPOTO43592 962 aaKnown RBP12.69□□□□□ -0.38
HDAC6-201ENST00000334136 PRCPP42785 496 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 SNCBQ16143 134 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 ATP8B4Q8TF62 1192 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 TNFRSF25Q93038 417 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 MMS19Q96T76 1030 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 C7orf25Q9BPX7 421 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 FUT8Q9BYC5 575 aa12.69□□□□□ -0.38
HDAC6-201ENST00000334136 PSMD10O75832 226 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 INSRRP14616 1297 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 ADCY1Q08828 1119 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 RINT1Q6NUQ1 792 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 HIBCHQ6NVY1 386 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-201ENST00000334136 RBM43Q6ZSC3 357 aaKnown RBP12.68□□□□□ -0.38
HDAC6-201ENST00000334136 COG1Q8WTW3 980 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 RNF186Q9NXI6 227 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 STIM2Q9P246 746 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 ADAMTS1Q9UHI8 967 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 TUBE1Q9UJT0 475 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 KRT5P13647 590 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 PRMT2P55345 433 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 LRRC63Q05C16 580 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 ACTN3Q08043 901 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-201ENST00000334136 ZNF568Q3ZCX4 644 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 FBXW10Q5XX13 1052 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 MS4A4AQ96JQ5 239 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 IQCGQ9H095 443 aaKnown RBP12.68□□□□□ -0.38
HDAC6-201ENST00000334136 SLITRK3O94933 977 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 C6orf163Q5TEZ5 329 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 MSL3Q8N5Y2 521 aaKnown RBP12.68□□□□□ -0.38
HDAC6-201ENST00000334136 PPP1R14CQ8TAE6 165 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 HPS3Q969F9 1004 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 MRPL4Q9BYD3 311 aaKnown RBP12.68□□□□□ -0.38
HDAC6-201ENST00000334136 AMFRQ9UKV5 643 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 NOVA2Q9UNW9 492 aaKnown RBP12.68□□□□□ -0.38
HDAC6-201ENST00000334136 PCDHA13Q9Y5I0 950 aa12.68□□□□□ -0.38
HDAC6-201ENST00000334136 CCDC160A6NGH7 325 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 ZNF233A6NK53 670 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 NCK2O43639 380 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 NLRP11P59045 1033 aaKnown RBP12.67□□□□□ -0.38
HDAC6-201ENST00000334136 RNASELQ05823 741 aaKnown RBP12.67□□□□□ -0.38
HDAC6-201ENST00000334136 UAP1Q16222 522 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-201ENST00000334136 DUSP28Q4G0W2 176 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 NAALADL2Q58DX5 795 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 NFRKBQ6P4R8 1299 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 CXCL17Q6UXB2 119 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 PPP4R3CPQ6ZMV5 832 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 SH2D3CQ8N5H7 860 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 AP1M1Q9BXS5 423 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 SETD4Q9NVD3 440 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 SRRDQ9UH36 339 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 ARAP2Q8WZ64 1704 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 GAS2O43903 313 aaKnown RBP12.67□□□□□ -0.38
HDAC6-201ENST00000334136 SLCO1A2P46721 670 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 CLCN3P51790 818 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 TFAMQ00059 246 aaKnown RBP12.67□□□□□ -0.38
HDAC6-201ENST00000334136 KNOP1Q1ED39 458 aaKnown RBP12.67□□□□□ -0.38
HDAC6-201ENST00000334136 RPAINQ86UA6 219 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 GUF1Q8N442 669 aaKnown RBP12.67□□□□□ -0.38
HDAC6-201ENST00000334136 SLAIN1Q8ND83 568 aa12.67□□□□□ -0.38
HDAC6-201ENST00000334136 N4BP2L2Q92802 583 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms