RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 EEF1DP3Q658K8 133 aa25.32■■□□□ 1.64
TSEN54-201ENST00000333213 MFSD14AQ96MC6 490 aa25.32■■□□□ 1.64
TSEN54-201ENST00000333213 PRMT7Q9NVM4 692 aaPredicted RBP25.32■■□□□ 1.64
TSEN54-201ENST00000333213 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.32■■□□□ 1.64
TSEN54-201ENST00000333213 TTC26A0AVF1 554 aa25.31■■□□□ 1.64
TSEN54-201ENST00000333213 CLDN3O15551 220 aa25.31■■□□□ 1.64
TSEN54-201ENST00000333213 EXTL3O43909 919 aa25.31■■□□□ 1.64
TSEN54-201ENST00000333213 MYCP01106 439 aaPredicted RBP25.31■■□□□ 1.64
TSEN54-201ENST00000333213 FGFR4P22455 802 aa25.31■■□□□ 1.64
TSEN54-201ENST00000333213 APBA1Q02410 837 aa25.31■■□□□ 1.64
TSEN54-201ENST00000333213 MTFR1Q15390 333 aa25.31■■□□□ 1.64
TSEN54-201ENST00000333213 FAM47CQ5HY64 1035 aa25.31■■□□□ 1.64
TSEN54-201ENST00000333213 SESTD1Q86VW0 696 aa25.31■■□□□ 1.64
TSEN54-201ENST00000333213 OSMRQ99650 979 aa25.31■■□□□ 1.64
TSEN54-201ENST00000333213 MSTO1Q9BUK6 570 aa25.31■■□□□ 1.64
TSEN54-201ENST00000333213 CCDC94Q9BW85 323 aaPredicted RBP25.31■■□□□ 1.64
TSEN54-201ENST00000333213 CCZ1BP86790 482 aa25.31■■□□□ 1.64
TSEN54-201ENST00000333213 CCZ1P86791 482 aaPredicted RBP25.31■■□□□ 1.64
TSEN54-201ENST00000333213 PPP3CAQ08209 521 aa25.31■■□□□ 1.64
TSEN54-201ENST00000333213 ATF7IP2Q5U623 682 aa25.31■■□□□ 1.64
TSEN54-201ENST00000333213 DPY19L2P1Q6NXN4 242 aa25.31■■□□□ 1.64
TSEN54-201ENST00000333213 ZBTB33Q86T24 672 aa25.31■■□□□ 1.64
TSEN54-201ENST00000333213 PARD3BQ8TEW8 1205 aa25.31■■□□□ 1.64
TSEN54-201ENST00000333213 TMEM40Q8WWA1 233 aa25.31■■□□□ 1.64
TSEN54-201ENST00000333213 SCLT1Q96NL6 688 aa25.31■■□□□ 1.64
TSEN54-201ENST00000333213 SFPQP23246 707 aaKnown RBP eCLIP25.3■■□□□ 1.64
TSEN54-201ENST00000333213 FMO5P49326 533 aa25.3■■□□□ 1.64
TSEN54-201ENST00000333213 MCL1Q07820 350 aa25.3■■□□□ 1.64
TSEN54-201ENST00000333213 CYP24A1Q07973 514 aa25.3■■□□□ 1.64
TSEN54-201ENST00000333213 SRGAP1Q7Z6B7 1085 aa25.3■■□□□ 1.64
TSEN54-201ENST00000333213 PPFIBP1Q86W92 1011 aa25.3■■□□□ 1.64
TSEN54-201ENST00000333213 CCDC150Q8NCX0 1101 aa25.3■■□□□ 1.64
TSEN54-201ENST00000333213 POP1Q99575 1024 aaKnown RBP25.3■■□□□ 1.64
TSEN54-201ENST00000333213 MMRN2Q9H8L6 949 aa25.3■■□□□ 1.64
TSEN54-201ENST00000333213 FAM207AQ9NSI2 230 aaPredicted RBP25.3■■□□□ 1.64
TSEN54-201ENST00000333213 AGPAT5Q9NUQ2 364 aa25.3■■□□□ 1.64
TSEN54-201ENST00000333213 CNTNAP2Q9UHC6 1331 aa25.3■■□□□ 1.64
TSEN54-201ENST00000333213 MFAP3LO75121 409 aa25.29■■□□□ 1.64
TSEN54-201ENST00000333213 HARSP12081 509 aaKnown RBP25.29■■□□□ 1.64
TSEN54-201ENST00000333213 KRT13P13646 458 aa25.29■■□□□ 1.64
TSEN54-201ENST00000333213 ARF4P18085 180 aaPredicted RBP25.29■■□□□ 1.64
TSEN54-201ENST00000333213 MATR3P43243 847 aaKnown RBP eCLIP25.29■■□□□ 1.64
TSEN54-201ENST00000333213 CCDC127Q96BQ5 260 aa25.29■■□□□ 1.64
TSEN54-201ENST00000333213 CPB2Q96IY4 423 aa25.29■■□□□ 1.64
TSEN54-201ENST00000333213 TCHPQ9BT92 498 aa25.29■■□□□ 1.64
TSEN54-201ENST00000333213 PAK6Q9NQU5 681 aaPredicted RBP25.29■■□□□ 1.64
TSEN54-201ENST00000333213 TNFSF13BQ9Y275 285 aa25.29■■□□□ 1.64
TSEN54-201ENST00000333213 AKR1B15C9JRZ8 316 aaPredicted RBP25.29■■□□□ 1.64
TSEN54-201ENST00000333213 KIAA0391O15091 583 aaKnown RBP25.29■■□□□ 1.64
TSEN54-201ENST00000333213 CTIFO43310 598 aaKnown RBP25.29■■□□□ 1.64
TSEN54-201ENST00000333213 TSPAN1O60635 241 aa25.29■■□□□ 1.64
TSEN54-201ENST00000333213 NOL4O94818 638 aa25.29■■□□□ 1.64
TSEN54-201ENST00000333213 SLC9A1P19634 815 aa25.29■■□□□ 1.64
TSEN54-201ENST00000333213 TNFSF9P41273 254 aa25.29■■□□□ 1.64
TSEN54-201ENST00000333213 CDC42EP1Q00587 391 aa25.29■■□□□ 1.64
TSEN54-201ENST00000333213 ITGA7Q13683 1181 aa25.29■■□□□ 1.64
TSEN54-201ENST00000333213 TAF2Q6P1X5 1199 aa25.29■■□□□ 1.64
TSEN54-201ENST00000333213 PCMTD1Q96MG8 357 aaPredicted RBP25.29■■□□□ 1.64
TSEN54-201ENST00000333213 MOXD2PA6NHM9 499 aa25.28■■□□□ 1.64
TSEN54-201ENST00000333213 ZNF233A6NK53 670 aa25.28■■□□□ 1.64
TSEN54-201ENST00000333213 LRRIQ3A6PVS8 624 aaPredicted RBP25.28■■□□□ 1.64
TSEN54-201ENST00000333213 TRIM21P19474 475 aaKnown RBP25.28■■□□□ 1.64
TSEN54-201ENST00000333213 SLC9C1Q4G0N8 1177 aa25.28■■□□□ 1.64
TSEN54-201ENST00000333213 FIGNQ5HY92 759 aa25.28■■□□□ 1.64
TSEN54-201ENST00000333213 MPZL3Q6UWV2 235 aa25.28■■□□□ 1.64
TSEN54-201ENST00000333213 SERINC5Q86VE9 423 aa25.28■■□□□ 1.64
TSEN54-201ENST00000333213 TMEM139Q8IV31 216 aa25.28■■□□□ 1.64
TSEN54-201ENST00000333213 TSEN34Q9BSV6 310 aaKnown RBP25.28■■□□□ 1.64
TSEN54-201ENST00000333213 TMX1Q9H3N1 280 aa25.28■■□□□ 1.64
TSEN54-201ENST00000333213 CAPN11Q9UMQ6 739 aa25.28■■□□□ 1.64
TSEN54-201ENST00000333213 DARSP14868 501 aaKnown RBP25.27■■□□□ 1.64
TSEN54-201ENST00000333213 TRIM14Q14142 442 aa25.27■■□□□ 1.64
TSEN54-201ENST00000333213 ZNF710Q8N1W2 664 aa25.27■■□□□ 1.64
TSEN54-201ENST00000333213 NME8Q8N427 588 aa25.27■■□□□ 1.64
TSEN54-201ENST00000333213 CEP120Q8N960 986 aa25.27■■□□□ 1.64
TSEN54-201ENST00000333213 FAM84AQ96KN4 292 aa25.27■■□□□ 1.64
TSEN54-201ENST00000333213 GCOM2Q9BZD3 368 aaPredicted RBP25.27■■□□□ 1.64
TSEN54-201ENST00000333213 PDZD7Q9H5P4 517 aa25.27■■□□□ 1.64
TSEN54-201ENST00000333213 KIAA1586Q9HCI6 787 aa25.27■■□□□ 1.64
TSEN54-201ENST00000333213 TOPORSQ9NS56 1045 aaPredicted RBP25.27■■□□□ 1.64
TSEN54-201ENST00000333213 CABYRO75952 493 aa25.27■■□□□ 1.64
TSEN54-201ENST00000333213 ACTN1P12814 892 aa25.27■■□□□ 1.64
TSEN54-201ENST00000333213 EIF4BP23588 611 aaKnown RBP25.27■■□□□ 1.64
TSEN54-201ENST00000333213 PON1P27169 355 aa25.27■■□□□ 1.64
TSEN54-201ENST00000333213 GCLMP48507 274 aa25.27■■□□□ 1.64
TSEN54-201ENST00000333213 VTI1AQ96AJ9 217 aa25.27■■□□□ 1.64
TSEN54-201ENST00000333213 NUP58Q9BVL2 599 aa25.27■■□□□ 1.64
TSEN54-201ENST00000333213 CDT1Q9H211 546 aa25.27■■□□□ 1.64
TSEN54-201ENST00000333213 MKI67P46013 3256 aaKnown RBP25.26■■□□□ 1.63
TSEN54-201ENST00000333213 A0A1W2PQ45 241 aaPredicted RBP25.26■■□□□ 1.63
TSEN54-201ENST00000333213 A0A1W2PQY0 241 aa25.26■■□□□ 1.63
TSEN54-201ENST00000333213 GTPBP10A4D1E9 387 aaKnown RBP25.26■■□□□ 1.63
TSEN54-201ENST00000333213 LRRN2O75325 713 aa25.26■■□□□ 1.63
TSEN54-201ENST00000333213 LDHAP00338 332 aaKnown RBP25.26■■□□□ 1.63
TSEN54-201ENST00000333213 HOXA11P31270 313 aaPredicted RBP25.26■■□□□ 1.63
TSEN54-201ENST00000333213 SNX17Q15036 470 aa25.26■■□□□ 1.63
TSEN54-201ENST00000333213 EXOC3L4Q17RC7 722 aa25.26■■□□□ 1.63
TSEN54-201ENST00000333213 ZNF568Q3ZCX4 644 aa25.26■■□□□ 1.63
TSEN54-201ENST00000333213 TMC2Q8TDI7 906 aa25.26■■□□□ 1.63
TSEN54-201ENST00000333213 GLT1D1Q96MS3 346 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms