RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 TMEM117Q9H0C3 514 aa12.66□□□□□ -0.38
EFCAB13-201ENST00000331493 PABPC3Q9H361 631 aaKnown RBP12.66□□□□□ -0.38
EFCAB13-201ENST00000331493 STK24Q9Y6E0 443 aa12.66□□□□□ -0.38
EFCAB13-201ENST00000331493 PLIN4Q96Q06 1357 aa12.66□□□□□ -0.38
EFCAB13-201ENST00000331493 LOC102724159A0A0B4J2E5 919 aa12.66□□□□□ -0.38
EFCAB13-201ENST00000331493 EIF3DO15371 548 aaKnown RBP eCLIP12.66□□□□□ -0.38
EFCAB13-201ENST00000331493 TRAPPC3O43617 180 aa12.66□□□□□ -0.38
EFCAB13-201ENST00000331493 P4HBP07237 508 aaKnown RBP12.66□□□□□ -0.38
EFCAB13-201ENST00000331493 CREB1P16220 341 aa12.66□□□□□ -0.38
EFCAB13-201ENST00000331493 RWDD2BP57060 319 aa12.66□□□□□ -0.38
EFCAB13-201ENST00000331493 PWP2Q15269 919 aaKnown RBP12.66□□□□□ -0.38
EFCAB13-201ENST00000331493 ARHGEF16Q5VV41 709 aa12.66□□□□□ -0.38
EFCAB13-201ENST00000331493 PRAMEF18Q5VWM3 479 aa12.66□□□□□ -0.38
EFCAB13-201ENST00000331493 TTC27Q6P3X3 843 aa12.66□□□□□ -0.38
EFCAB13-201ENST00000331493 SPIRE2Q8WWL2 714 aa12.66□□□□□ -0.38
EFCAB13-201ENST00000331493 ZSWIM1Q9BR11 485 aa12.66□□□□□ -0.38
EFCAB13-201ENST00000331493 FZD1Q9UP38 647 aa12.66□□□□□ -0.38
EFCAB13-201ENST00000331493 PHF2O75151 1096 aa12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 RARAP10276 462 aa12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 ACOT2P49753 483 aa12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 SPOPLQ6IQ16 392 aa12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 KIF2BQ8N4N8 673 aa12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 ATP8B4Q8TF62 1192 aa12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 ARHGEF2Q92974 986 aaKnown RBP12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 TAAR1Q96RJ0 339 aa12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 RMDN3Q96TC7 470 aa12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 DNM1LO00429 736 aa12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 PIAS1O75925 651 aa12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 CD58P19256 250 aa12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 DMP1Q13316 513 aaPredicted RBP12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 CD302Q8IX05 232 aa12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 DAW1Q8N136 415 aa12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 LBHD1Q9BQE6 289 aaPredicted RBP12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 PLVAPQ9BX97 442 aa12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 OSBPL7Q9BZF2 842 aa12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 TMEM206Q9H813 350 aa12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 FGFR1OP2Q9NVK5 253 aa12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 TRPC5Q9UL62 973 aaPredicted RBP12.65□□□□□ -0.38
EFCAB13-201ENST00000331493 TCP11X1B4DZS4 312 aa12.65□□□□□ -0.39
EFCAB13-201ENST00000331493 H0YGN5 161 aa12.65□□□□□ -0.39
EFCAB13-201ENST00000331493 KIAA0391O15091 583 aaKnown RBP12.65□□□□□ -0.39
EFCAB13-201ENST00000331493 ADRB2P07550 413 aa12.65□□□□□ -0.39
EFCAB13-201ENST00000331493 MTERF2Q49AM1 385 aa12.65□□□□□ -0.39
EFCAB13-201ENST00000331493 KIFAP3Q92845 792 aa12.65□□□□□ -0.39
EFCAB13-201ENST00000331493 MXRA8Q9BRK3 442 aa12.65□□□□□ -0.39
EFCAB13-201ENST00000331493 SEPT9Q9UHD8 586 aaPredicted RBP12.65□□□□□ -0.39
EFCAB13-201ENST00000331493 NFS1Q9Y697 457 aa12.65□□□□□ -0.39
EFCAB13-201ENST00000331493 DLEC1Q9Y238 1755 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 GOLGA8SH3BPF8 625 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 GOLGA8MH3BSY2 632 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 RTN2O75298 545 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 CHRNA3P32297 505 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 GBP2P32456 591 aaPredicted RBP12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 STX2P32856 288 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 CIITAP33076 1130 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 TRAF1Q13077 416 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 SPATS2Q86XZ4 545 aaKnown RBP12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 SEMA4DQ92854 862 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 SEL1LQ9UBV2 794 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 LAMB2P55268 1798 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 ATP9AO75110 1047 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 SCP2P22307 547 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 CTNNA2P26232 953 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 CNGA1P29973 690 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 HOXA7P31268 230 aaPredicted RBP12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 PPP2R5AQ15172 486 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 SNCBQ16143 134 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 UGCGQ16739 394 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 TATDN1Q6P1N9 297 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 CCDC91Q7Z6B0 441 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 SLC13A5Q86YT5 568 aaPredicted RBP12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 MTFR1LQ9H019 292 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 CHST7Q9NS84 486 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 STXBP5LQ9Y2K9 1186 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 COL22A1Q8NFW1 1626 aaPredicted RBP12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 A0A0A6YYK5 440 aaPredicted RBP12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 SPAG7O75391 227 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 COILP38432 576 aaPredicted RBP12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 RARRES1P49788 294 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 EIF3BP55884 814 aaKnown RBP12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 DYNLT1P63172 113 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 BYSLQ13895 437 aaKnown RBP12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 TMED2Q15363 201 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 SYCP2LQ5T4T6 812 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 DUPD1Q68J44 220 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 NLRX1Q86UT6 975 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 CCDC63Q8NA47 563 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 GMCL1P1Q8NEA9 526 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 SLC5A5Q92911 643 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 MKNK1Q9BUB5 465 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 C1orf112Q9NSG2 853 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 SLC12A6Q9UHW9 1150 aa12.64□□□□□ -0.39
EFCAB13-201ENST00000331493 GTPBP10A4D1E9 387 aaKnown RBP12.63□□□□□ -0.39
EFCAB13-201ENST00000331493 LRRIQ4A6NIV6 560 aa12.63□□□□□ -0.39
EFCAB13-201ENST00000331493 ATF2P15336 505 aa12.63□□□□□ -0.39
EFCAB13-201ENST00000331493 WDR44Q5JSH3 913 aa12.63□□□□□ -0.39
EFCAB13-201ENST00000331493 AGBL2Q5U5Z8 902 aa12.63□□□□□ -0.39
EFCAB13-201ENST00000331493 SLFN11Q7Z7L1 901 aa12.63□□□□□ -0.39
EFCAB13-201ENST00000331493 MBOAT7Q96N66 472 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms