RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 ATP6V1G1O75348 118 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 SPAG7O75391 227 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 CHRNA3P32297 505 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 ERFP50548 548 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 STRN3Q13033 797 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 ACSBG2Q5FVE4 666 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 ACBD5Q5T8D3 534 aaPredicted RBP19.5■□□□□ 0.71
SOCS3-201ENST00000330871 RBM26Q5T8P6 1007 aaKnown RBP19.5■□□□□ 0.71
SOCS3-201ENST00000330871 PRUNE1Q86TP1 453 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 REXO1Q8N1G1 1221 aaKnown RBP19.5■□□□□ 0.71
SOCS3-201ENST00000330871 RAB34Q9BZG1 259 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 DHX36Q9H2U1 1008 aaKnown RBP19.5■□□□□ 0.71
SOCS3-201ENST00000330871 ZHX3Q9H4I2 956 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 AAASQ9NRG9 546 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 SEPT11Q9NVA2 429 aaKnown RBP19.5■□□□□ 0.71
SOCS3-201ENST00000330871 MROH7Q68CQ1 1323 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 ROBO3Q96MS0 1386 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 PODXLO00592 558 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 LMNAP02545 664 aaKnown RBP19.5■□□□□ 0.71
SOCS3-201ENST00000330871 SETSIPP0DME0 302 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 ATP5DP30049 168 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 PRKCIP41743 596 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 NEK3P51956 506 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 WDR4P57081 412 aaKnown RBP19.5■□□□□ 0.71
SOCS3-201ENST00000330871 TMEM62Q0P6H9 643 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 ITPK1Q13572 414 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 RFFLQ8WZ73 363 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 SPATA16Q9BXB7 569 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 VCX3BQ9H321 246 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 VCX3AQ9NNX9 186 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 TMEM260Q9NX78 707 aa19.5■□□□□ 0.71
SOCS3-201ENST00000330871 NR2F2P24468 414 aa19.49■□□□□ 0.71
SOCS3-201ENST00000330871 MAGEA10P43363 369 aaPredicted RBP19.49■□□□□ 0.71
SOCS3-201ENST00000330871 USP46P62068 366 aa19.49■□□□□ 0.71
SOCS3-201ENST00000330871 RPS8P62241 208 aaKnown RBP19.49■□□□□ 0.71
SOCS3-201ENST00000330871 OCRLQ01968 901 aa19.49■□□□□ 0.71
SOCS3-201ENST00000330871 CTNNBL1Q8WYA6 563 aaPredicted RBP19.49■□□□□ 0.71
SOCS3-201ENST00000330871 PWWP2AQ96N64 755 aa19.49■□□□□ 0.71
SOCS3-201ENST00000330871 FAM192AQ9GZU8 254 aa19.49■□□□□ 0.71
SOCS3-201ENST00000330871 CHORDC1Q9UHD1 332 aaPredicted RBP19.49■□□□□ 0.71
SOCS3-201ENST00000330871 COG5Q9UP83 839 aa19.49■□□□□ 0.71
SOCS3-201ENST00000330871 PDLIM1O00151 329 aa19.49■□□□□ 0.71
SOCS3-201ENST00000330871 ECE2O60344 883 aa19.49■□□□□ 0.71
SOCS3-201ENST00000330871 RASSF2P50749 326 aa19.49■□□□□ 0.71
SOCS3-201ENST00000330871 CDR2Q01850 454 aa19.49■□□□□ 0.71
SOCS3-201ENST00000330871 RFX8Q6ZV50 586 aa19.49■□□□□ 0.71
SOCS3-201ENST00000330871 FAM163AQ96GL9 167 aaPredicted RBP19.49■□□□□ 0.71
SOCS3-201ENST00000330871 CADM1Q9BY67 442 aaKnown RBP19.49■□□□□ 0.71
SOCS3-201ENST00000330871 THAP2Q9H0W7 228 aa19.49■□□□□ 0.71
SOCS3-201ENST00000330871 TAOK3Q9H2K8 898 aa19.49■□□□□ 0.71
SOCS3-201ENST00000330871 TAS2R14Q9NYV8 317 aa19.49■□□□□ 0.71
SOCS3-201ENST00000330871 PDP2Q9P2J9 529 aa19.49■□□□□ 0.71
SOCS3-201ENST00000330871 JAG2Q9Y219 1238 aa19.49■□□□□ 0.71
SOCS3-201ENST00000330871 TAF1P21675 1872 aa19.48■□□□□ 0.71
SOCS3-201ENST00000330871 SLC37A4O43826 429 aa19.48■□□□□ 0.71
SOCS3-201ENST00000330871 PTPN4P29074 926 aa19.48■□□□□ 0.71
SOCS3-201ENST00000330871 KRT79Q5XKE5 535 aa19.48■□□□□ 0.71
SOCS3-201ENST00000330871 SLC44A5Q8NCS7 719 aa19.48■□□□□ 0.71
SOCS3-201ENST00000330871 SCFD1Q8WVM8 642 aa19.48■□□□□ 0.71
SOCS3-201ENST00000330871 DYDC2Q96IM9 177 aa19.48■□□□□ 0.71
SOCS3-201ENST00000330871 ANKRD2Q9GZV1 360 aa19.48■□□□□ 0.71
SOCS3-201ENST00000330871 DIS3Q9Y2L1 958 aaKnown RBP19.48■□□□□ 0.71
SOCS3-201ENST00000330871 NUMBLQ9Y6R0 609 aa19.48■□□□□ 0.71
SOCS3-201ENST00000330871 TTLL1O95922 423 aa19.48■□□□□ 0.71
SOCS3-201ENST00000330871 LYNP07948 512 aa19.48■□□□□ 0.71
SOCS3-201ENST00000330871 MARSP56192 900 aaKnown RBP19.48■□□□□ 0.71
SOCS3-201ENST00000330871 RTP1P59025 263 aa19.48■□□□□ 0.71
SOCS3-201ENST00000330871 IL9RQ01113 521 aa19.48■□□□□ 0.71
SOCS3-201ENST00000330871 CALCOCO2Q13137 446 aa19.48■□□□□ 0.71
SOCS3-201ENST00000330871 MOGSQ13724 837 aa19.48■□□□□ 0.71
SOCS3-201ENST00000330871 HERC4Q5GLZ8 1057 aaPredicted RBP19.48■□□□□ 0.71
SOCS3-201ENST00000330871 TRMT10CQ7L0Y3 403 aaKnown RBP19.48■□□□□ 0.71
SOCS3-201ENST00000330871 RBM17Q96I25 401 aaKnown RBP19.48■□□□□ 0.71
SOCS3-201ENST00000330871 TUBGCP5Q96RT8 1024 aa19.48■□□□□ 0.71
SOCS3-201ENST00000330871 VAT1LQ9HCJ6 419 aa19.48■□□□□ 0.71
SOCS3-201ENST00000330871 ETNK2Q9NVF9 386 aa19.48■□□□□ 0.71
SOCS3-201ENST00000330871 PCYOX1Q9UHG3 505 aa19.48■□□□□ 0.71
SOCS3-201ENST00000330871 HNRNPRO43390 633 aaKnown RBP19.47■□□□□ 0.71
SOCS3-201ENST00000330871 DCTN3O75935 186 aa19.47■□□□□ 0.71
SOCS3-201ENST00000330871 SMARCA1P28370 1054 aa19.47■□□□□ 0.71
SOCS3-201ENST00000330871 DEUP1Q05D60 604 aa19.47■□□□□ 0.71
SOCS3-201ENST00000330871 SLC34A1Q06495 639 aa19.47■□□□□ 0.71
SOCS3-201ENST00000330871 LCA5Q86VQ0 697 aa19.47■□□□□ 0.71
SOCS3-201ENST00000330871 SESTD1Q86VW0 696 aa19.47■□□□□ 0.71
SOCS3-201ENST00000330871 ZNF232Q9UNY5 417 aa19.47■□□□□ 0.71
SOCS3-201ENST00000330871 NAALADL1Q9UQQ1 740 aa19.47■□□□□ 0.71
SOCS3-201ENST00000330871 STARD13Q9Y3M8 1113 aa19.47■□□□□ 0.71
SOCS3-201ENST00000330871 ALG6Q9Y672 507 aa19.47■□□□□ 0.71
SOCS3-201ENST00000330871 WASF2Q9Y6W5 498 aa19.47■□□□□ 0.71
SOCS3-201ENST00000330871 ESYT2A0FGR8 921 aa19.47■□□□□ 0.71
SOCS3-201ENST00000330871 TDP2O95551 362 aa19.47■□□□□ 0.71
SOCS3-201ENST00000330871 WDR72Q3MJ13 1102 aa19.47■□□□□ 0.71
SOCS3-201ENST00000330871 USP17L2Q6R6M4 530 aa19.47■□□□□ 0.71
SOCS3-201ENST00000330871 EPM2AIP1Q7L775 607 aaPredicted RBP19.47■□□□□ 0.71
SOCS3-201ENST00000330871 HS2ST1Q7LGA3 356 aa19.47■□□□□ 0.71
SOCS3-201ENST00000330871 PPFIBP2Q8ND30 876 aa19.47■□□□□ 0.71
SOCS3-201ENST00000330871 KCTD10Q9H3F6 313 aa19.47■□□□□ 0.71
SOCS3-201ENST00000330871 ZNF287Q9HBT7 754 aa19.47■□□□□ 0.71
SOCS3-201ENST00000330871 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.47■□□□□ 0.711e-5■□□□□ 9.3
SOCS3-201ENST00000330871 LNPEPQ9UIQ6 1025 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms