RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 POMCP01189 267 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 RPA1P27694 616 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 CA8P35219 290 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 ME1P48163 572 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 ZXDAP98168 799 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 ITIH3Q06033 890 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 IL17AQ16552 155 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 ZBTB33Q86T24 672 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 VPS52Q8N1B4 723 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 KRI1Q8N9T8 703 aaKnown RBP16.27■□□□□ 0.2
TSPO-201ENST00000329563 PBXIP1Q96AQ6 731 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 PGBD4Q96DM1 585 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 FBXL18Q96ME1 805 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 APOL5Q9BWW9 433 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 NFKBIZQ9BYH8 718 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 RAB34Q9BZG1 259 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 POLD4Q9HCU8 107 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 MIOSQ9NXC5 875 aa16.27■□□□□ 0.2
TSPO-201ENST00000329563 F8W810 466 aa16.26■□□□□ 0.19
TSPO-201ENST00000329563 CUTAO60888 179 aa16.26■□□□□ 0.19
TSPO-201ENST00000329563 CLASP2O75122 1294 aaKnown RBP16.26■□□□□ 0.19
TSPO-201ENST00000329563 EDN1P05305 212 aa16.26■□□□□ 0.19
TSPO-201ENST00000329563 MCM4P33991 863 aa16.26■□□□□ 0.19
TSPO-201ENST00000329563 FXR2P51116 673 aaKnown RBP eCLIP16.26■□□□□ 0.19
TSPO-201ENST00000329563 RNASELQ05823 741 aaKnown RBP16.26■□□□□ 0.19
TSPO-201ENST00000329563 SIGLEC14Q08ET2 396 aa16.26■□□□□ 0.19
TSPO-201ENST00000329563 TFDP1Q14186 410 aa16.26■□□□□ 0.19
TSPO-201ENST00000329563 DTHD1Q6ZMT9 781 aa16.26■□□□□ 0.19
TSPO-201ENST00000329563 DDX53Q86TM3 631 aaKnown RBP16.26■□□□□ 0.19
TSPO-201ENST00000329563 GSTCDQ8NEC7 633 aa16.26■□□□□ 0.19
TSPO-201ENST00000329563 ZFP42Q96MM3 310 aa16.26■□□□□ 0.19
TSPO-201ENST00000329563 NACC1Q96RE7 527 aa16.26■□□□□ 0.19
TSPO-201ENST00000329563 CSRNP2Q9H175 543 aa16.26■□□□□ 0.19
TSPO-201ENST00000329563 NXF3Q9H4D5 531 aaKnown RBP16.26■□□□□ 0.19
TSPO-201ENST00000329563 DZANK1Q9NVP4 752 aa16.26■□□□□ 0.19
TSPO-201ENST00000329563 USP20Q9Y2K6 914 aa16.26■□□□□ 0.19
TSPO-201ENST00000329563 SRPRBQ9Y5M8 271 aaKnown RBP16.26■□□□□ 0.19
TSPO-201ENST00000329563 HCFC2Q9Y5Z7 792 aa16.26■□□□□ 0.19
TSPO-201ENST00000329563 MYO10Q9HD67 2058 aa16.26■□□□□ 0.19
TSPO-201ENST00000329563 CNTNAP2Q9UHC6 1331 aa16.25■□□□□ 0.19
TSPO-201ENST00000329563 PP2D1A8MPX8 630 aa16.25■□□□□ 0.19
TSPO-201ENST00000329563 INPPL1O15357 1258 aa16.25■□□□□ 0.19
TSPO-201ENST00000329563 AXLP30530 894 aa16.25■□□□□ 0.19
TSPO-201ENST00000329563 MLH1P40692 756 aa16.25■□□□□ 0.19
TSPO-201ENST00000329563 NHLH1Q02575 133 aa16.25■□□□□ 0.19
TSPO-201ENST00000329563 PCBP1Q15365 356 aaKnown RBP eCLIP16.25■□□□□ 0.19
TSPO-201ENST00000329563 CDCA2Q69YH5 1023 aaPredicted RBP16.25■□□□□ 0.19
TSPO-201ENST00000329563 ADALQ6DHV7 355 aa16.25■□□□□ 0.19
TSPO-201ENST00000329563 NOTUMQ6P988 496 aa16.25■□□□□ 0.19
TSPO-201ENST00000329563 PADI6Q6TGC4 694 aa16.25■□□□□ 0.19
TSPO-201ENST00000329563 URGCPQ8TCY9 931 aa16.25■□□□□ 0.19
TSPO-201ENST00000329563 RIPOR3Q96MK2 946 aa16.25■□□□□ 0.19
TSPO-201ENST00000329563 CCDC43Q96MW1 224 aaKnown RBP16.25■□□□□ 0.19
TSPO-201ENST00000329563 GAD1Q99259 594 aa16.25■□□□□ 0.19
TSPO-201ENST00000329563 MARCH5Q9NX47 278 aa16.25■□□□□ 0.19
TSPO-201ENST00000329563 A0A1B0GUA9 196 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 ARL5CA6NH57 179 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 NRP1O14786 923 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 PRPF40AO75400 957 aaKnown RBP16.24■□□□□ 0.19
TSPO-201ENST00000329563 CXCL14O95715 111 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 EFEMP2O95967 443 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 CTSAP10619 480 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 ITGA4P13612 1032 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 MARCKSP29966 332 aaPredicted RBP16.24■□□□□ 0.19
TSPO-201ENST00000329563 LONP1P36776 959 aaKnown RBP16.24■□□□□ 0.19
TSPO-201ENST00000329563 MTHFRP42898 656 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 PTPN5P54829 565 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 PDIA5Q14554 519 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 PTPN21Q16825 1174 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 KANK3Q6NY19 840 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 ALYREFQ86V81 257 aaKnown RBP16.24■□□□□ 0.19
TSPO-201ENST00000329563 COLGALT2Q8IYK4 626 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 IGSF22Q8N9C0 903 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 CHAMP1Q96JM3 812 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 APOL6Q9BWW8 343 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 CXCL16Q9H2A7 254 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 FZD8Q9H461 694 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 GDPD2Q9HCC8 539 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 PCDHA7Q9UN72 937 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 IRAK3Q9Y616 596 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 STK24Q9Y6E0 443 aa16.24■□□□□ 0.19
TSPO-201ENST00000329563 TDRD15B5MCY1 1934 aaKnown RBP16.23■□□□□ 0.19
TSPO-201ENST00000329563 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.23■□□□□ 0.19
TSPO-201ENST00000329563 A0A1W2PQ27 194 aa16.23■□□□□ 0.19
TSPO-201ENST00000329563 A0A1W2PQ64 194 aa16.23■□□□□ 0.19
TSPO-201ENST00000329563 A0A1W2PQD8 194 aa16.23■□□□□ 0.19
TSPO-201ENST00000329563 LRRIQ4A6NIV6 560 aa16.23■□□□□ 0.19
TSPO-201ENST00000329563 NPTXRO95502 500 aa16.23■□□□□ 0.19
TSPO-201ENST00000329563 EPCAMP16422 314 aa16.23■□□□□ 0.19
TSPO-201ENST00000329563 CYP11B2P19099 503 aa16.23■□□□□ 0.19
TSPO-201ENST00000329563 AKAP5P24588 427 aa16.23■□□□□ 0.19
TSPO-201ENST00000329563 CDC25AP30304 524 aa16.23■□□□□ 0.19
TSPO-201ENST00000329563 CCT6AP40227 531 aaKnown RBP16.23■□□□□ 0.19
TSPO-201ENST00000329563 SCNN1GP51170 649 aa16.23■□□□□ 0.19
TSPO-201ENST00000329563 UBE2HP62256 183 aa16.23■□□□□ 0.19
TSPO-201ENST00000329563 DSC1Q08554 894 aa16.23■□□□□ 0.19
TSPO-201ENST00000329563 PTPN14Q15678 1187 aa16.23■□□□□ 0.19
TSPO-201ENST00000329563 PPP4R3CPQ6ZMV5 832 aa16.23■□□□□ 0.19
TSPO-201ENST00000329563 PPFIBP1Q86W92 1011 aa16.23■□□□□ 0.19
TSPO-201ENST00000329563 FBXL6Q8N531 539 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms