RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 DGAT1O75907 488 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 DGKIO75912 1065 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 MAPTP10636 758 aaKnown RBP18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 ATP1A3P13637 1013 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 STX17P56962 302 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 ALCAMQ13740 583 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 FAM102BQ5T8I3 360 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 PADI6Q6TGC4 694 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 RNF149Q8NC42 400 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 BSNDQ8WZ55 320 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 YME1L1Q96TA2 773 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 ATP6V0A4Q9HBG4 840 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 SLC39A2Q9NP94 309 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 SAMSN1Q9NSI8 373 aaKnown RBP18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 STXBP5LQ9Y2K9 1186 aa18.01■□□□□ 0.47
PDLIM1-201ENST00000329399 DENND3A2RUS2 1198 aa18■□□□□ 0.47
PDLIM1-201ENST00000329399 EIF3DO15371 548 aaKnown RBP eCLIP18■□□□□ 0.47
PDLIM1-201ENST00000329399 LPXNO60711 386 aa18■□□□□ 0.47
PDLIM1-201ENST00000329399 HOXA11P31270 313 aaPredicted RBP18■□□□□ 0.47
PDLIM1-201ENST00000329399 CAPSQ13938 189 aa18■□□□□ 0.47
PDLIM1-201ENST00000329399 NR1I3Q14994 352 aa18■□□□□ 0.47
PDLIM1-201ENST00000329399 TCP11X2Q5H9J9 407 aa18■□□□□ 0.47
PDLIM1-201ENST00000329399 ZNF410Q86VK4 478 aa18■□□□□ 0.47
PDLIM1-201ENST00000329399 CSGALNACT2Q8N6G5 542 aa18■□□□□ 0.47
PDLIM1-201ENST00000329399 CCDC150Q8NCX0 1101 aa18■□□□□ 0.47
PDLIM1-201ENST00000329399 CCDC43Q96MW1 224 aaKnown RBP18■□□□□ 0.47
PDLIM1-201ENST00000329399 POLR3FQ9H1D9 316 aaPredicted RBP18■□□□□ 0.47
PDLIM1-201ENST00000329399 RNF19AQ9NV58 838 aa18■□□□□ 0.47
PDLIM1-201ENST00000329399 HCSTQ9UBK5 93 aa18■□□□□ 0.47
PDLIM1-201ENST00000329399 GNA14O95837 355 aa17.99■□□□□ 0.47
PDLIM1-201ENST00000329399 SCP2P22307 547 aa17.99■□□□□ 0.47
PDLIM1-201ENST00000329399 ABCD1P33897 745 aa17.99■□□□□ 0.47
PDLIM1-201ENST00000329399 ZNF131P52739 623 aa17.99■□□□□ 0.47
PDLIM1-201ENST00000329399 EDRF1Q3B7T1 1238 aa17.99■□□□□ 0.47
PDLIM1-201ENST00000329399 SLC24A5Q71RS6 500 aa17.99■□□□□ 0.47
PDLIM1-201ENST00000329399 VSTM4Q8IW00 320 aa17.99■□□□□ 0.47
PDLIM1-201ENST00000329399 ZNF710Q8N1W2 664 aa17.99■□□□□ 0.47
PDLIM1-201ENST00000329399 SPC24Q8NBT2 197 aa17.99■□□□□ 0.47
PDLIM1-201ENST00000329399 CEP63Q96MT8 703 aa17.99■□□□□ 0.47
PDLIM1-201ENST00000329399 REEP2Q9BRK0 252 aa17.99■□□□□ 0.47
PDLIM1-201ENST00000329399 PARVGQ9HBI0 331 aa17.99■□□□□ 0.47
PDLIM1-201ENST00000329399 KCNJ18B7U540 433 aa17.98■□□□□ 0.47
PDLIM1-201ENST00000329399 FAM13AO94988 1023 aa17.98■□□□□ 0.47
PDLIM1-201ENST00000329399 FGFR1P11362 822 aa17.98■□□□□ 0.47
PDLIM1-201ENST00000329399 ATF7P17544 494 aaPredicted RBP17.98■□□□□ 0.47
PDLIM1-201ENST00000329399 PTENP60484 403 aa17.98■□□□□ 0.47
PDLIM1-201ENST00000329399 ERVK-21P61565 698 aa17.98■□□□□ 0.47
PDLIM1-201ENST00000329399 CDC42EP1Q00587 391 aa17.98■□□□□ 0.47
PDLIM1-201ENST00000329399 FKBP3Q00688 224 aaKnown RBP17.98■□□□□ 0.47
PDLIM1-201ENST00000329399 KCNJ12Q14500 433 aa17.98■□□□□ 0.47
PDLIM1-201ENST00000329399 BMT2Q1RMZ1 405 aa17.98■□□□□ 0.47
PDLIM1-201ENST00000329399 PAN2Q504Q3 1202 aaKnown RBP17.98■□□□□ 0.47
PDLIM1-201ENST00000329399 NPAS4Q8IUM7 802 aa17.98■□□□□ 0.47
PDLIM1-201ENST00000329399 EXOC8Q8IYI6 725 aa17.98■□□□□ 0.47
PDLIM1-201ENST00000329399 TCP11Q8WWU5 503 aa17.98■□□□□ 0.47
PDLIM1-201ENST00000329399 RUSC1Q9BVN2 902 aa17.98■□□□□ 0.47
PDLIM1-201ENST00000329399 SRRTQ9BXP5 876 aaKnown RBP17.98■□□□□ 0.47
PDLIM1-201ENST00000329399 MAPK8IP1Q9UQF2 711 aa17.98■□□□□ 0.47
PDLIM1-201ENST00000329399 USP20Q9Y2K6 914 aa17.98■□□□□ 0.47
PDLIM1-201ENST00000329399 TTLL13PA6NNM8 815 aa17.97■□□□□ 0.47
PDLIM1-201ENST00000329399 MEIS3P2A8K0S8 358 aa17.97■□□□□ 0.47
PDLIM1-201ENST00000329399 GAS2O43903 313 aaKnown RBP17.97■□□□□ 0.47
PDLIM1-201ENST00000329399 FOSL2P15408 326 aa17.97■□□□□ 0.47
PDLIM1-201ENST00000329399 AMHR2Q16671 573 aa17.97■□□□□ 0.47
PDLIM1-201ENST00000329399 SPECC1LQ69YQ0 1117 aa17.97■□□□□ 0.47
PDLIM1-201ENST00000329399 ANKRD40Q6AI12 368 aa17.97■□□□□ 0.47
PDLIM1-201ENST00000329399 EPM2AIP1Q7L775 607 aaPredicted RBP17.97■□□□□ 0.47
PDLIM1-201ENST00000329399 CCDC186Q7Z3E2 898 aa17.97■□□□□ 0.47
PDLIM1-201ENST00000329399 DAW1Q8N136 415 aa17.97■□□□□ 0.47
PDLIM1-201ENST00000329399 GDPD5Q8WTR4 605 aa17.97■□□□□ 0.47
PDLIM1-201ENST00000329399 IQCDQ96DY2 449 aa17.97■□□□□ 0.47
PDLIM1-201ENST00000329399 DRC1Q96MC2 740 aa17.97■□□□□ 0.47
PDLIM1-201ENST00000329399 TGS1Q96RS0 853 aaKnown RBP17.97■□□□□ 0.47
PDLIM1-201ENST00000329399 DUSP9Q99956 384 aaKnown RBP17.97■□□□□ 0.47
PDLIM1-201ENST00000329399 C17orf75Q9HAS0 396 aa17.97■□□□□ 0.47
PDLIM1-201ENST00000329399 RTN4Q9NQC3 1192 aaKnown RBP17.97■□□□□ 0.47
PDLIM1-201ENST00000329399 LARSQ9P2J5 1176 aaKnown RBP17.97■□□□□ 0.47
PDLIM1-201ENST00000329399 ASAP2O43150 1006 aa17.96■□□□□ 0.47
PDLIM1-201ENST00000329399 IGFBP4P22692 258 aa17.96■□□□□ 0.47
PDLIM1-201ENST00000329399 MBTD1Q05BQ5 628 aa17.96■□□□□ 0.47
PDLIM1-201ENST00000329399 TRIM14Q14142 442 aa17.96■□□□□ 0.47
PDLIM1-201ENST00000329399 MXD4Q14582 209 aaPredicted RBP17.96■□□□□ 0.47
PDLIM1-201ENST00000329399 NFIL3Q16649 462 aa17.96■□□□□ 0.47
PDLIM1-201ENST00000329399 CATSPER4Q7RTX7 472 aa17.96■□□□□ 0.47
PDLIM1-201ENST00000329399 ZNF598Q86UK7 904 aaKnown RBP17.96■□□□□ 0.47
PDLIM1-201ENST00000329399 ECHDC2Q86YB7 292 aa17.96■□□□□ 0.47
PDLIM1-201ENST00000329399 ZNF507Q8TCN5 953 aa17.96■□□□□ 0.47
PDLIM1-201ENST00000329399 TRAF3IP3Q9Y228 551 aa17.96■□□□□ 0.47
PDLIM1-201ENST00000329399 PIN4Q9Y237 131 aaKnown RBP17.96■□□□□ 0.47
PDLIM1-201ENST00000329399 PCDHB7Q9Y5E2 793 aa17.96■□□□□ 0.47
PDLIM1-201ENST00000329399 PCDHB13Q9Y5F0 798 aa17.96■□□□□ 0.47
PDLIM1-201ENST00000329399 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.96■□□□□ 0.47
PDLIM1-201ENST00000329399 MRPL42Q9Y6G3 142 aaKnown RBP17.96■□□□□ 0.47
PDLIM1-201ENST00000329399 ITIH6Q6UXX5 1313 aa17.96■□□□□ 0.47
PDLIM1-201ENST00000329399 PDXKO00764 312 aa17.95■□□□□ 0.46
PDLIM1-201ENST00000329399 B4GALT5O43286 388 aa17.95■□□□□ 0.46
PDLIM1-201ENST00000329399 CALUO43852 315 aaPredicted RBP17.95■□□□□ 0.46
PDLIM1-201ENST00000329399 EDN1P05305 212 aa17.95■□□□□ 0.46
PDLIM1-201ENST00000329399 ZSCAN20P17040 1043 aaPredicted RBP17.95■□□□□ 0.46
PDLIM1-201ENST00000329399 RPL13P26373 211 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms