RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 CCDC90BQ9GZT6 254 aa16.33■□□□□ 0.21
PTPN21-201ENST00000328736 SLC9A2Q9UBY0 812 aa16.33■□□□□ 0.21
PTPN21-201ENST00000328736 LSM7Q9UK45 103 aaKnown RBP16.33■□□□□ 0.21
PTPN21-201ENST00000328736 TARBP1Q13395 1621 aaKnown RBP16.33■□□□□ 0.21
PTPN21-201ENST00000328736 MAP4P27816 1152 aaKnown RBP16.33■□□□□ 0.21
PTPN21-201ENST00000328736 RCAN1P53805 252 aa16.33■□□□□ 0.21
PTPN21-201ENST00000328736 TBC1D1Q86TI0 1168 aaPredicted RBP16.33■□□□□ 0.21
PTPN21-201ENST00000328736 ZC3H18Q86VM9 953 aaKnown RBP16.33■□□□□ 0.21
PTPN21-201ENST00000328736 MFN1Q8IWA4 741 aa16.33■□□□□ 0.21
PTPN21-201ENST00000328736 FOPNLQ96NB1 174 aa16.33■□□□□ 0.21
PTPN21-201ENST00000328736 PARVAQ9NVD7 372 aa16.33■□□□□ 0.21
PTPN21-201ENST00000328736 PCSK1NQ9UHG2 260 aa16.33■□□□□ 0.21
PTPN21-201ENST00000328736 ANO9A1A5B4 782 aa16.33■□□□□ 0.2
PTPN21-201ENST00000328736 ST8SIA6P61647 398 aa16.33■□□□□ 0.2
PTPN21-201ENST00000328736 KCNH2Q12809 1159 aa16.33■□□□□ 0.2
PTPN21-201ENST00000328736 LRRC23Q53EV4 343 aaPredicted RBP16.33■□□□□ 0.2
PTPN21-201ENST00000328736 SPATA2LQ8IUW3 424 aaPredicted RBP16.33■□□□□ 0.2
PTPN21-201ENST00000328736 KIF12Q96FN5 646 aa16.33■□□□□ 0.2
PTPN21-201ENST00000328736 TMEM47Q9BQJ4 181 aa16.33■□□□□ 0.2
PTPN21-201ENST00000328736 TRADDQ15628 312 aa16.33■□□□□ 0.2
PTPN21-201ENST00000328736 DDX53Q86TM3 631 aaKnown RBP16.33■□□□□ 0.2
PTPN21-201ENST00000328736 ATP11CQ8NB49 1132 aa16.33■□□□□ 0.2
PTPN21-201ENST00000328736 RNF25Q96BH1 459 aaPredicted RBP16.33■□□□□ 0.2
PTPN21-201ENST00000328736 DHX35Q9H5Z1 703 aaKnown RBP16.33■□□□□ 0.2
PTPN21-201ENST00000328736 ARL4DP49703 201 aa16.33■□□□□ 0.2
PTPN21-201ENST00000328736 HSD17B4P51659 736 aa16.33■□□□□ 0.2
PTPN21-201ENST00000328736 OR6P1Q8NGX9 317 aa16.33■□□□□ 0.2
PTPN21-201ENST00000328736 AIPL1Q9NZN9 384 aa16.33■□□□□ 0.2
PTPN21-201ENST00000328736 GPSM2P81274 684 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 GRM4Q14833 912 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 FASTKD1Q53R41 847 aaKnown RBP16.32■□□□□ 0.2
PTPN21-201ENST00000328736 FAM102AQ5T9C2 384 aaPredicted RBP16.32■□□□□ 0.2
PTPN21-201ENST00000328736 SCFD1Q8WVM8 642 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 ABHD10Q9NUJ1 306 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 CDC42BPGQ6DT37 1551 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 LRRC53A6NM62 1247 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 KRT14P02533 472 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 CDC27P30260 824 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 EFNA5P52803 228 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 GPS1Q13098 491 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 KHDRBS2Q5VWX1 349 aaKnown RBP16.32■□□□□ 0.2
PTPN21-201ENST00000328736 MMS22LQ6ZRQ5 1243 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 NUDCD3Q8IVD9 361 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 TDRD3Q9H7E2 651 aaKnown RBP16.32■□□□□ 0.2
PTPN21-201ENST00000328736 WDR19Q8NEZ3 1342 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 FAM187AA6NFU0 413 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 ARIH2O95376 493 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 ABCE1P61221 599 aaKnown RBP16.32■□□□□ 0.2
PTPN21-201ENST00000328736 GSPT2Q8IYD1 628 aaKnown RBP16.32■□□□□ 0.2
PTPN21-201ENST00000328736 MARCH10Q8NA82 808 aaPredicted RBP16.32■□□□□ 0.2
PTPN21-201ENST00000328736 RUBCNLQ9H714 662 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 PLEKHA5Q9HAU0 1116 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 SLC4A7Q9Y6M7 1214 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 PFASO15067 1338 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 SPDYE5A6NIY4 337 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 LAMB3Q13751 1172 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 SPDYE7PQ495Y7 208 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 HECW2Q9P2P5 1572 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 ZC3H4Q9UPT8 1303 aaKnown RBP16.32■□□□□ 0.2
PTPN21-201ENST00000328736 KIAA0391O15091 583 aaKnown RBP16.32■□□□□ 0.2
PTPN21-201ENST00000328736 HSPA1AP0DMV8 641 aaKnown RBP16.32■□□□□ 0.2
PTPN21-201ENST00000328736 HSPA1BP0DMV9 641 aaKnown RBP16.32■□□□□ 0.2
PTPN21-201ENST00000328736 ANO4Q32M45 955 aa16.32■□□□□ 0.2
PTPN21-201ENST00000328736 RBAKQ9NYW8 714 aaPredicted RBP16.32■□□□□ 0.2
PTPN21-201ENST00000328736 GRIK1P39086 918 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 ARFIP2P53365 341 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 PDIA2Q13087 525 aaKnown RBP16.31■□□□□ 0.2
PTPN21-201ENST00000328736 SNX17Q15036 470 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 ANO5Q75V66 913 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 MROH7-TTC4A0A0A0MT08 1334 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 IL10P22301 178 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 SSTR3P32745 418 aaPredicted RBP16.31■□□□□ 0.2
PTPN21-201ENST00000328736 KCNJ6P48051 423 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 ANKRD40Q6AI12 368 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 PKN3Q6P5Z2 889 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 ATICP31939 592 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 CLCN6P51797 869 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 DAB2P98082 770 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 PGBD4Q96DM1 585 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 TMEM106CQ9BVX2 250 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 CCDC22O60826 627 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 ASMTLO95671 621 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 MTHFD1LQ6UB35 978 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 THOC1Q96FV9 657 aaKnown RBP16.31■□□□□ 0.2
PTPN21-201ENST00000328736 STOML1Q9UBI4 398 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 TTC7AQ9ULT0 858 aaPredicted RBP16.31■□□□□ 0.2
PTPN21-201ENST00000328736 USP17L15C9J2P7 530 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 USP17L13C9JLJ4 530 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 USP17L11C9JVI0 530 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 USP17L18D6R9N7 530 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 USP17L22D6RA61 530 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 USP17L17D6RBQ6 530 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 USP17L19D6RCP7 530 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 USP17L20D6RJB6 530 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 HIST1H2AGP0C0S8 130 aaPredicted RBP16.31■□□□□ 0.2
PTPN21-201ENST00000328736 HIST1H2ADP20671 130 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 USP17L24Q0WX57 530 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 SEMA3FQ13275 785 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 DUOXA2Q1HG44 320 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 HIST1H2AHQ96KK5 128 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms