RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 RASGRF2O14827 1237 aa21.33■■□□□ 1.01
CRLF3-201ENST00000324238 ANXA13P27216 316 aa21.33■■□□□ 1.01
CRLF3-201ENST00000324238 CHKAP35790 457 aa21.33■■□□□ 1.01
CRLF3-201ENST00000324238 SP4Q02446 784 aa21.33■■□□□ 1.01
CRLF3-201ENST00000324238 ZNF653Q96CK0 615 aa21.33■■□□□ 1.01
CRLF3-201ENST00000324238 THOC1Q96FV9 657 aaKnown RBP21.33■■□□□ 1.01
CRLF3-201ENST00000324238 ADAM33Q9BZ11 813 aa21.33■■□□□ 1.01
CRLF3-201ENST00000324238 RASAL2Q9UJF2 1139 aa21.33■■□□□ 1.01
CRLF3-201ENST00000324238 CHUKO15111 745 aa21.33■■□□□ 1.01
CRLF3-201ENST00000324238 RPSAP08865 295 aaKnown RBP21.33■■□□□ 1.01
CRLF3-201ENST00000324238 PAEPP09466 180 aa21.33■■□□□ 1.01
CRLF3-201ENST00000324238 ITGB5P18084 799 aa21.33■■□□□ 1.01
CRLF3-201ENST00000324238 SEL1L2Q5TEA6 688 aa21.33■■□□□ 1.01
CRLF3-201ENST00000324238 GMCL1P1Q8NEA9 526 aa21.33■■□□□ 1.01
CRLF3-201ENST00000324238 DYDC1Q8WWB3 177 aa21.33■■□□□ 1.01
CRLF3-201ENST00000324238 HEMGNQ9BXL5 484 aa21.33■■□□□ 1.01
CRLF3-201ENST00000324238 KCNK9Q9NPC2 374 aa21.33■■□□□ 1.01
CRLF3-201ENST00000324238 CCT8L1PA6NM43 557 aa21.33■■□□□ 1
CRLF3-201ENST00000324238 CCDC169A6NNP5 214 aa21.33■■□□□ 1
CRLF3-201ENST00000324238 RIPK2O43353 540 aa21.33■■□□□ 1
CRLF3-201ENST00000324238 ADRB2P07550 413 aa21.33■■□□□ 1
CRLF3-201ENST00000324238 MMP13P45452 471 aa21.33■■□□□ 1
CRLF3-201ENST00000324238 MMP14P50281 582 aa21.33■■□□□ 1
CRLF3-201ENST00000324238 EIF3BP55884 814 aaKnown RBP21.33■■□□□ 1
CRLF3-201ENST00000324238 SNCBQ16143 134 aa21.33■■□□□ 1
CRLF3-201ENST00000324238 ZNF564Q8TBZ8 553 aaPredicted RBP21.33■■□□□ 1
CRLF3-201ENST00000324238 HERPUD2Q9BSE4 406 aa21.33■■□□□ 1
CRLF3-201ENST00000324238 MKNK1Q9BUB5 465 aa21.33■■□□□ 1
CRLF3-201ENST00000324238 TMEM117Q9H0C3 514 aa21.33■■□□□ 1
CRLF3-201ENST00000324238 ZNF277Q9NRM2 450 aaPredicted RBP21.33■■□□□ 1
CRLF3-201ENST00000324238 UBR3Q6ZT12 1888 aa21.32■■□□□ 1
CRLF3-201ENST00000324238 GH1P01241 217 aa21.32■■□□□ 1
CRLF3-201ENST00000324238 GJC1P36383 396 aa21.32■■□□□ 1
CRLF3-201ENST00000324238 PEX3P56589 373 aa21.32■■□□□ 1
CRLF3-201ENST00000324238 PPP2R5CQ13362 524 aa21.32■■□□□ 1
CRLF3-201ENST00000324238 AUHQ13825 339 aaKnown RBP21.32■■□□□ 1
CRLF3-201ENST00000324238 EPS8L1Q8TE68 723 aa21.32■■□□□ 1
CRLF3-201ENST00000324238 MYCBPQ99417 103 aaPredicted RBP21.32■■□□□ 1
CRLF3-201ENST00000324238 HSPBP1Q9NZL4 362 aa21.32■■□□□ 1
CRLF3-201ENST00000324238 SCN9AQ15858 1988 aa21.32■■□□□ 1
CRLF3-201ENST00000324238 FAM187AA6NFU0 413 aa21.32■■□□□ 1
CRLF3-201ENST00000324238 CCDC172P0C7W6 258 aa21.32■■□□□ 1
CRLF3-201ENST00000324238 COILP38432 576 aaPredicted RBP21.32■■□□□ 1
CRLF3-201ENST00000324238 ZNF131P52739 623 aa21.32■■□□□ 1
CRLF3-201ENST00000324238 DHX34Q14147 1143 aaKnown RBP21.32■■□□□ 1
CRLF3-201ENST00000324238 PLA2G4FQ68DD2 849 aa21.32■■□□□ 1
CRLF3-201ENST00000324238 RHOT2Q8IXI1 618 aa21.32■■□□□ 1
CRLF3-201ENST00000324238 ARHGEF10LQ9HCE6 1279 aa21.32■■□□□ 1
CRLF3-201ENST00000324238 CHST7Q9NS84 486 aa21.32■■□□□ 1
CRLF3-201ENST00000324238 AGAP1Q9UPQ3 857 aa21.32■■□□□ 1
CRLF3-201ENST00000324238 PCDHA3Q9Y5H8 950 aa21.32■■□□□ 1
CRLF3-201ENST00000324238 LY75O60449 1722 aa21.32■■□□□ 1
CRLF3-201ENST00000324238 FOCADQ5VW36 1801 aa21.32■■□□□ 1
CRLF3-201ENST00000324238 NFIBO00712 420 aa21.31■■□□□ 1
CRLF3-201ENST00000324238 LMBRD2Q68DH5 695 aaPredicted RBP21.31■■□□□ 1
CRLF3-201ENST00000324238 LDHDQ86WU2 507 aa21.31■■□□□ 1
CRLF3-201ENST00000324238 SLC13A5Q86YT5 568 aaPredicted RBP21.31■■□□□ 1
CRLF3-201ENST00000324238 SGSM3Q96HU1 749 aa21.31■■□□□ 1
CRLF3-201ENST00000324238 FGFR1OP2Q9NVK5 253 aa21.31■■□□□ 1
CRLF3-201ENST00000324238 TMOD2Q9NZR1 351 aa21.31■■□□□ 1
CRLF3-201ENST00000324238 ASIC3Q9UHC3 531 aa21.31■■□□□ 1
CRLF3-201ENST00000324238 SERPINA10Q9UK55 444 aa21.31■■□□□ 1
CRLF3-201ENST00000324238 O00370 1275 aa21.31■■□□□ 1
CRLF3-201ENST00000324238 NUDT17P0C025 328 aa21.31■■□□□ 1
CRLF3-201ENST00000324238 CHRNA3P32297 505 aa21.31■■□□□ 1
CRLF3-201ENST00000324238 PPP2R5AQ15172 486 aa21.31■■□□□ 1
CRLF3-201ENST00000324238 HP1BP3Q5SSJ5 553 aaPredicted RBP21.31■■□□□ 1
CRLF3-201ENST00000324238 MIER3Q7Z3K6 550 aa21.31■■□□□ 1
CRLF3-201ENST00000324238 EXOC3L1Q86VI1 746 aa21.31■■□□□ 1
CRLF3-201ENST00000324238 KIF2BQ8N4N8 673 aa21.31■■□□□ 1
CRLF3-201ENST00000324238 CNOT10Q9H9A5 744 aaKnown RBP21.31■■□□□ 1
CRLF3-201ENST00000324238 ACTR5Q9H9F9 607 aaPredicted RBP21.31■■□□□ 1
CRLF3-201ENST00000324238 MTRF1LQ9UGC7 380 aaKnown RBP21.31■■□□□ 1
CRLF3-201ENST00000324238 SYNGAP1Q96PV0 1343 aa21.3■■□□□ 1
CRLF3-201ENST00000324238 MXI1P50539 228 aa21.3■■□□□ 1
CRLF3-201ENST00000324238 SLC15A2Q16348 729 aa21.3■■□□□ 1
CRLF3-201ENST00000324238 KYNUQ16719 465 aa21.3■■□□□ 1
CRLF3-201ENST00000324238 RNF207Q6ZRF8 634 aa21.3■■□□□ 1
CRLF3-201ENST00000324238 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.3■■□□□ 11e-6■□□□□ 9.6
CRLF3-201ENST00000324238 COL20A1Q9P218 1284 aa21.3■■□□□ 1
CRLF3-201ENST00000324238 PFASO15067 1338 aa21.3■■□□□ 1
CRLF3-201ENST00000324238 STXBP4Q6ZWJ1 553 aa21.3■■□□□ 1
CRLF3-201ENST00000324238 TEKT3Q9BXF9 490 aa21.3■■□□□ 1
CRLF3-201ENST00000324238 CDC42EP4Q9H3Q1 356 aaKnown RBP21.3■■□□□ 1
CRLF3-201ENST00000324238 CXorf56Q9H5V9 222 aa21.3■■□□□ 1
CRLF3-201ENST00000324238 ZHX2Q9Y6X8 837 aa21.3■■□□□ 1
CRLF3-201ENST00000324238 TCP11X1B4DZS4 312 aa21.3■■□□□ 1
CRLF3-201ENST00000324238 SLC26A4O43511 780 aa21.3■■□□□ 1
CRLF3-201ENST00000324238 MYCLP12524 364 aaPredicted RBP21.3■■□□□ 1
CRLF3-201ENST00000324238 ALAS1P13196 640 aa21.3■■□□□ 1
CRLF3-201ENST00000324238 SPP2Q13103 211 aa21.3■■□□□ 1
CRLF3-201ENST00000324238 GGA2Q9UJY4 613 aa21.3■■□□□ 1
CRLF3-201ENST00000324238 L3MBTL1Q9Y468 752 aa21.3■■□□□ 1
CRLF3-201ENST00000324238 KRT5P13647 590 aa21.29■■□□□ 1
CRLF3-201ENST00000324238 EIF2AK2P19525 551 aaKnown RBP21.29■■□□□ 1
CRLF3-201ENST00000324238 CTNNA2P26232 953 aa21.29■■□□□ 1
CRLF3-201ENST00000324238 FMO1Q01740 532 aa21.29■■□□□ 1
CRLF3-201ENST00000324238 DLGAP5Q15398 846 aa21.29■■□□□ 1
CRLF3-201ENST00000324238 UGCGQ16739 394 aa21.29■■□□□ 1
CRLF3-201ENST00000324238 ACCSLQ4AC99 568 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms