RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 ARHGAP4P98171 946 aa19.16■□□□□ 0.66
PRKCB-202ENST00000321728 KRT17Q04695 432 aa19.16■□□□□ 0.66
PRKCB-202ENST00000321728 SETDB1Q15047 1291 aa19.16■□□□□ 0.66
PRKCB-202ENST00000321728 MTFR1Q15390 333 aa19.16■□□□□ 0.66
PRKCB-202ENST00000321728 SHROOM1Q2M3G4 852 aaPredicted RBP19.16■□□□□ 0.66
PRKCB-202ENST00000321728 MFSD14BQ5SR56 506 aa19.16■□□□□ 0.66
PRKCB-202ENST00000321728 AP1ARQ63HQ0 302 aa19.16■□□□□ 0.66
PRKCB-202ENST00000321728 CEP120Q8N960 986 aa19.16■□□□□ 0.66
PRKCB-202ENST00000321728 ANKLE1Q8NAG6 615 aa19.16■□□□□ 0.66
PRKCB-202ENST00000321728 ARHGEF1Q92888 912 aaKnown RBP19.16■□□□□ 0.66
PRKCB-202ENST00000321728 BTBD6Q96KE9 485 aa19.16■□□□□ 0.66
PRKCB-202ENST00000321728 DNAJC18Q9H819 358 aa19.16■□□□□ 0.66
PRKCB-202ENST00000321728 NARFQ9UHQ1 456 aa19.16■□□□□ 0.66
PRKCB-202ENST00000321728 ZMYM2Q9UBW7 1377 aa19.16■□□□□ 0.66
PRKCB-202ENST00000321728 CYP3A7-CYP3A51PA0A087WV96 503 aa19.15■□□□□ 0.66
PRKCB-202ENST00000321728 A6NHS1 94 aa19.15■□□□□ 0.66
PRKCB-202ENST00000321728 CYP3A7P24462 503 aa19.15■□□□□ 0.66
PRKCB-202ENST00000321728 THEMIS2Q5TEJ8 643 aa19.15■□□□□ 0.66
PRKCB-202ENST00000321728 HS2ST1Q7LGA3 356 aa19.15■□□□□ 0.66
PRKCB-202ENST00000321728 RPUSD2Q8IZ73 545 aaKnown RBP19.15■□□□□ 0.66
PRKCB-202ENST00000321728 CYP4X1Q8N118 509 aa19.15■□□□□ 0.66
PRKCB-202ENST00000321728 PIGOQ8TEQ8 1089 aa19.15■□□□□ 0.66
PRKCB-202ENST00000321728 TMEM237Q96Q45 408 aa19.15■□□□□ 0.66
PRKCB-202ENST00000321728 MYLK2Q9H1R3 596 aa19.15■□□□□ 0.66
PRKCB-202ENST00000321728 UBE2TQ9NPD8 197 aaPredicted RBP19.15■□□□□ 0.66
PRKCB-202ENST00000321728 UBAP1LF5GYI3 381 aa19.15■□□□□ 0.66
PRKCB-202ENST00000321728 TTC4O95801 387 aa19.15■□□□□ 0.66
PRKCB-202ENST00000321728 BCRP11274 1271 aa19.15■□□□□ 0.66
PRKCB-202ENST00000321728 RAD23BP54727 409 aa19.15■□□□□ 0.66
PRKCB-202ENST00000321728 RNASELQ05823 741 aaKnown RBP19.15■□□□□ 0.66
PRKCB-202ENST00000321728 TRIP13Q15645 432 aaPredicted RBP19.15■□□□□ 0.66
PRKCB-202ENST00000321728 ZNF568Q3ZCX4 644 aa19.15■□□□□ 0.66
PRKCB-202ENST00000321728 ERP27Q96DN0 273 aa19.15■□□□□ 0.66
PRKCB-202ENST00000321728 OLFML3Q9NRN5 406 aa19.15■□□□□ 0.66
PRKCB-202ENST00000321728 RGL1Q9NZL6 768 aa19.15■□□□□ 0.66
PRKCB-202ENST00000321728 ZMYND8Q9ULU4 1186 aaPredicted RBP19.15■□□□□ 0.66
PRKCB-202ENST00000321728 NHSQ6T4R5 1651 aa19.15■□□□□ 0.66
PRKCB-202ENST00000321728 CDK5RAP2Q96SN8 1893 aa19.14■□□□□ 0.65
PRKCB-202ENST00000321728 ATP4AP20648 1035 aa19.14■□□□□ 0.65
PRKCB-202ENST00000321728 TARSP26639 723 aaKnown RBP19.14■□□□□ 0.65
PRKCB-202ENST00000321728 CTCFP49711 727 aaPredicted RBP19.14■□□□□ 0.65
PRKCB-202ENST00000321728 STRN3Q13033 797 aa19.14■□□□□ 0.65
PRKCB-202ENST00000321728 GPATCH4Q5T3I0 446 aaKnown RBP19.14■□□□□ 0.65
PRKCB-202ENST00000321728 TEX9Q8N6V9 391 aa19.14■□□□□ 0.65
PRKCB-202ENST00000321728 RNPEPL1Q9HAU8 725 aa19.14■□□□□ 0.65
PRKCB-202ENST00000321728 WHRNQ9P202 907 aa19.14■□□□□ 0.65
PRKCB-202ENST00000321728 FAM196BA6NMK8 535 aa19.14■□□□□ 0.65
PRKCB-202ENST00000321728 TULP1O00294 542 aaPredicted RBP19.14■□□□□ 0.65
PRKCB-202ENST00000321728 CLDN3O15551 220 aa19.14■□□□□ 0.65
PRKCB-202ENST00000321728 GAP43P17677 238 aa19.14■□□□□ 0.65
PRKCB-202ENST00000321728 CALB2P22676 271 aa19.14■□□□□ 0.65
PRKCB-202ENST00000321728 SIX1Q15475 284 aaPredicted RBP19.14■□□□□ 0.65
PRKCB-202ENST00000321728 QRICH1Q2TAL8 776 aa19.14■□□□□ 0.65
PRKCB-202ENST00000321728 SGO2Q562F6 1265 aa19.14■□□□□ 0.65
PRKCB-202ENST00000321728 RINT1Q6NUQ1 792 aa19.14■□□□□ 0.65
PRKCB-202ENST00000321728 ANKRD27Q96NW4 1050 aa19.14■□□□□ 0.65
PRKCB-202ENST00000321728 HAO1Q9UJM8 370 aa19.14■□□□□ 0.65
PRKCB-202ENST00000321728 RIMBP2O15034 1052 aa19.13■□□□□ 0.65
PRKCB-202ENST00000321728 PDHA1P08559 390 aa19.13■□□□□ 0.65
PRKCB-202ENST00000321728 CCDC15Q0P6D6 951 aa19.13■□□□□ 0.65
PRKCB-202ENST00000321728 SLC30A10Q6XR72 485 aa19.13■□□□□ 0.65
PRKCB-202ENST00000321728 GRAMD1AQ96CP6 724 aa19.13■□□□□ 0.65
PRKCB-202ENST00000321728 MKNK1Q9BUB5 465 aa19.13■□□□□ 0.65
PRKCB-202ENST00000321728 GLT8D2Q9H1C3 349 aa19.13■□□□□ 0.65
PRKCB-202ENST00000321728 DPPA5A6NC42 116 aa19.13■□□□□ 0.65
PRKCB-202ENST00000321728 TP73O15350 636 aa19.13■□□□□ 0.65
PRKCB-202ENST00000321728 GNAZP19086 355 aa19.13■□□□□ 0.65
PRKCB-202ENST00000321728 TAC1P20366 129 aa19.13■□□□□ 0.65
PRKCB-202ENST00000321728 FOXN2P32314 431 aa19.13■□□□□ 0.65
PRKCB-202ENST00000321728 MBOAT7Q96N66 472 aa19.13■□□□□ 0.65
PRKCB-202ENST00000321728 CD209Q9NNX6 404 aa19.13■□□□□ 0.65
PRKCB-202ENST00000321728 PLIN4Q96Q06 1357 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 TNRC6CQ9HCJ0 1690 aaKnown RBP19.12■□□□□ 0.65
PRKCB-202ENST00000321728 EIF3DO15371 548 aaKnown RBP eCLIP19.12■□□□□ 0.65
PRKCB-202ENST00000321728 EYA4O95677 639 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 ITIH2P19823 946 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 VPS41P49754 854 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 RWDD2BP57060 319 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 ACVR2BQ13705 512 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 PPP1R21Q6ZMI0 780 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 LMNTD2Q8IXW0 634 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 PWWP2AQ96N64 755 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 NUDCD1Q96RS6 583 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 NAALADL1Q9UQQ1 740 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 LRRC42Q9Y546 428 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 H0Y3Z8 333 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 EXOC3O60645 756 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 ITGA8P53708 1063 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 INHBEP58166 350 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 IL9RQ01113 521 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 ANO7Q6IWH7 933 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 ZNF564Q8TBZ8 553 aaPredicted RBP19.12■□□□□ 0.65
PRKCB-202ENST00000321728 CD101Q93033 1021 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 SNF8Q96H20 258 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 LRRC37BQ96QE4 947 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 EIF2AK1Q9BQI3 630 aaKnown RBP19.12■□□□□ 0.65
PRKCB-202ENST00000321728 LRMDAQ9H2I8 198 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 LRRC19Q9H756 370 aa19.12■□□□□ 0.65
PRKCB-202ENST00000321728 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.12■□□□□ 0.657e-7■■■■■ 84.3
PRKCB-202ENST00000321728 IGKV6D-41A0A0C4DH26 115 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms