RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 SLC47A2Q86VL8 602 aa11.77□□□□□ -0.52
TOP3A-201ENST00000321105 PALM2Q8IXS6 379 aa11.77□□□□□ -0.52
TOP3A-201ENST00000321105 PRPF31Q8WWY3 499 aaKnown RBP11.77□□□□□ -0.52
TOP3A-201ENST00000321105 CLMNQ96JQ2 1002 aa11.77□□□□□ -0.52
TOP3A-201ENST00000321105 TMEM117Q9H0C3 514 aa11.77□□□□□ -0.52
TOP3A-201ENST00000321105 CYP26B1Q9NR63 512 aa11.77□□□□□ -0.52
TOP3A-201ENST00000321105 COMMD10Q9Y6G5 202 aa11.77□□□□□ -0.52
TOP3A-201ENST00000321105 FAM169AQ9Y6X4 670 aa11.77□□□□□ -0.52
TOP3A-201ENST00000321105 ROBO1Q9Y6N7 1651 aa11.77□□□□□ -0.52
TOP3A-201ENST00000321105 IRF6O14896 467 aa11.77□□□□□ -0.53
TOP3A-201ENST00000321105 MMEP08473 750 aa11.77□□□□□ -0.53
TOP3A-201ENST00000321105 COMTP21964 271 aa11.77□□□□□ -0.53
TOP3A-201ENST00000321105 NAB2Q15742 525 aa11.77□□□□□ -0.53
TOP3A-201ENST00000321105 SMTNL2Q2TAL5 461 aa11.77□□□□□ -0.53
TOP3A-201ENST00000321105 AP5M1Q9H0R1 490 aa11.77□□□□□ -0.53
TOP3A-201ENST00000321105 VIRMAQ69YN4 1812 aaKnown RBP11.77□□□□□ -0.53
TOP3A-201ENST00000321105 PTPRAP18433 802 aa11.77□□□□□ -0.53
TOP3A-201ENST00000321105 IFT88Q13099 833 aa11.77□□□□□ -0.53
TOP3A-201ENST00000321105 BBS9Q3SYG4 887 aa11.77□□□□□ -0.53
TOP3A-201ENST00000321105 TATDN1Q6P1N9 297 aa11.77□□□□□ -0.53
TOP3A-201ENST00000321105 ANKS4BQ8N8V4 417 aa11.77□□□□□ -0.53
TOP3A-201ENST00000321105 CCNYQ8ND76 341 aa11.77□□□□□ -0.53
TOP3A-201ENST00000321105 LRRC15Q8TF66 581 aa11.77□□□□□ -0.53
TOP3A-201ENST00000321105 COPS5Q92905 334 aa11.77□□□□□ -0.53
TOP3A-201ENST00000321105 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.77□□□□□ -0.535e-7■■■□□ 17.1
TOP3A-201ENST00000321105 EFCC1Q9HA90 598 aa11.77□□□□□ -0.53
TOP3A-201ENST00000321105 RGL2O15211 777 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 GJB1P08034 283 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 ARHGAP25P42331 645 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 KCNMA1Q12791 1236 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 EFCAB12Q6NXP0 572 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 KCTD6Q8NC69 237 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 GDAP1Q8TB36 358 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 RBM46Q8TBY0 533 aaKnown RBP11.76□□□□□ -0.53
TOP3A-201ENST00000321105 ZBTB10Q96DT7 871 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 MRPL4Q9BYD3 311 aaKnown RBP11.76□□□□□ -0.53
TOP3A-201ENST00000321105 SPC25Q9HBM1 224 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 FEZ2Q9UHY8 353 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-201ENST00000321105 ANAPC5Q9UJX4 755 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 PDE2AO00408 941 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-201ENST00000321105 PDGFRBP09619 1106 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 ITGA4P13612 1032 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 FGFR4P22455 802 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 STX2P32856 288 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 YWHAGP61981 247 aaKnown RBP eCLIP11.76□□□□□ -0.53
TOP3A-201ENST00000321105 TAF12Q16514 161 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 UGCGQ16739 394 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 CCDC137Q6PK04 289 aaKnown RBP11.76□□□□□ -0.53
TOP3A-201ENST00000321105 SV2AQ7L0J3 742 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 SLC17A8Q8NDX2 589 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 ETNPPLQ8TBG4 499 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 KIAA1683Q9H0B3 1180 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 SLC5A4Q9NY91 659 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 FBXL5Q9UKA1 691 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 MORC2Q9Y6X9 1032 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-201ENST00000321105 MTMR3Q13615 1198 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 DUOXA2Q1HG44 320 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 CCDC60Q8IWA6 550 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-201ENST00000321105 CCDC13Q8IYE1 715 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 CCDC33Q8N5R6 958 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 C2orf69Q8N8R5 385 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 ZNF507Q8TCN5 953 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 ATG4AQ8WYN0 398 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 RPS6KC1Q96S38 1066 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 FHDC1Q9C0D6 1143 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-201ENST00000321105 STMN4Q9H169 189 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-201ENST00000321105 MRPL47Q9HD33 250 aaKnown RBP11.76□□□□□ -0.53
TOP3A-201ENST00000321105 FAM49BQ9NUQ9 324 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 COL20A1Q9P218 1284 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 CCL15-CCL14A0A0B4J2E2 113 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 ANKRD63C9JTQ0 380 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 GJB6O95452 261 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 VTNP04004 478 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 SNHG28P0DPA3 235 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 RARBP10826 455 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 GPC3P51654 580 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 LRRC14Q15048 493 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 CCL15Q16663 113 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 CYP4A22Q5TCH4 519 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 TMEM139Q8IV31 216 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 WNK4Q96J92 1243 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 AGAP1Q9UPQ3 857 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 SNX9Q9Y5X1 595 aa11.76□□□□□ -0.53
TOP3A-201ENST00000321105 C5P01031 1676 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 M0QYV0 167 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 PSMD10O75832 226 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 RPS12P25398 132 aaKnown RBP11.75□□□□□ -0.53
TOP3A-201ENST00000321105 TGFB2P61812 414 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 PSMC1P62191 440 aaKnown RBP11.75□□□□□ -0.53
TOP3A-201ENST00000321105 NOP14P78316 857 aaKnown RBP11.75□□□□□ -0.53
TOP3A-201ENST00000321105 MXRA7P84157 204 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 DMTNQ08495 405 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 VGLL4Q14135 290 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 CCNI2Q6ZMN8 369 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-201ENST00000321105 ZC3H18Q86VM9 953 aaKnown RBP11.75□□□□□ -0.53
TOP3A-201ENST00000321105 TMEM35BQ8NCS4 154 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 KIF12Q96FN5 646 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 JPH2Q9BR39 696 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-201ENST00000321105 EDEM3Q9BZQ6 932 aa11.75□□□□□ -0.53
TOP3A-201ENST00000321105 MTMR12Q9C0I1 747 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms