RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 SAMD7Q7Z3H4 446 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 ACER1Q8TDN7 264 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 KRT12Q99456 494 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 KLF6Q99612 283 aaPredicted RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 UNKQ9C0B0 810 aaKnown RBP3.87□□□□□ -1.79
GEN1-201ENST00000317402 KLC4Q9NSK0 619 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 ANGPTL3Q9Y5C1 460 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 ACACBO00763 2458 aa3.87□□□□□ -1.79
GEN1-201ENST00000317402 CALML3P27482 149 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 HNRNPH1P31943 449 aaKnown RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 TBL3Q12788 808 aaKnown RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 KIF22Q14807 665 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 POTEAQ6S8J7 498 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 RSPH3Q86UC2 560 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 NME8Q8N427 588 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 FANCBQ8NB91 859 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 GLIS1Q8NBF1 620 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 CASKIN2Q8WXE0 1202 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 EIF2AQ9BY44 585 aaKnown RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 GPRC5CQ9NQ84 441 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 TCP11L1Q9NUJ3 509 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 PNMA3Q9UL41 463 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 CHMP2BQ9UQN3 213 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 LZTS1Q9Y250 596 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 LRRC53A6NM62 1247 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 KRT38O76015 456 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 FGFR2P21802 821 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 NMT1P30419 496 aaKnown RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 PHBP35232 272 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 MTA1Q13330 715 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 FLOT2Q14254 428 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 RIPOR1Q6ZS17 1223 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 ARHGAP24Q8N264 748 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 BBOF1Q8ND07 529 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 ZIM3Q96PE6 472 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 CNNM2Q9H8M5 875 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 CACYBPQ9HB71 228 aaKnown RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 USP40Q9NVE5 1235 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 TNRC6CQ9HCJ0 1690 aaKnown RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 POTEB3A0JP26 581 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 PCP4L1A6NKN8 68 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 POTECB2RU33 542 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 TRIM49P0CI25 452 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 TRIM49CP0CI26 452 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 ABCB4P21439 1286 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 GNAQP50148 359 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 ATXN3P54252 364 aaPredicted RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 CORO7P57737 925 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 ARPC4P59998 168 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 TSC22D1Q15714 1073 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 POTEBQ6S5H4 581 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 POTEEQ6S8J3 1075 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 SH3RF1Q7Z6J0 888 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 CATIPQ7Z7H3 387 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 NOP9Q86U38 636 aaKnown RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 OMA1Q96E52 524 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 CEP95Q96GE4 821 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 RIOK1Q9BRS2 568 aaKnown RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.86□□□□□ -1.79
GEN1-201ENST00000317402 SAE1Q9UBE0 346 aaPredicted RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 DDX60LQ5H9U9 1706 aaKnown RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 GSTTP1A0A1W2PQM5 241 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 FAM200BP0CF97 657 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 KRT5P13647 590 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 MFN1Q8IWA4 741 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 ZNF34Q8IZ26 560 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 ST13P4Q8IZP2 240 aaPredicted RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 ATG4AQ8WYN0 398 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 CCDC77Q9BR77 488 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 DDX47Q9H0S4 455 aaKnown RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 CCDC68Q9H2F9 335 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 ZNF408Q9H9D4 720 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 PIDD1Q9HB75 910 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 ALPK3Q96L96 1907 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 UTYO14607 1347 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 STXBP3O00186 592 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 APOEP02649 317 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 EDN1P05305 212 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 SPATA31D3P0C874 917 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 EEF2P13639 858 aaKnown RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 PLCG1P19174 1290 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 KRT9P35527 623 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 EIF4A3P38919 411 aaKnown RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 SLC9A5Q14940 896 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 KAZNQ674X7 775 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 SPATA31D4Q6ZUB0 917 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 RSRC2Q7L4I2 434 aaKnown RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 ZBTB46Q86UZ6 589 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 PARVBQ9HBI1 364 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 DSEQ9UL01 958 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 FMNL1O95466 1100 aaPredicted RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 PECAM1P16284 738 aaPredicted RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 GRB10Q13322 594 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 OLIG2Q13516 323 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 CASP8Q14790 479 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 SEPT2Q15019 361 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 SPOPLQ6IQ16 392 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 GATAD2AQ86YP4 633 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 NOSTRINQ8IVI9 506 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 DYDC2Q96IM9 177 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms