RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 PHLDB2Q86SQ0 1253 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 PNMA1Q8ND90 353 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 TTC8Q8TAM2 541 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 TMEM47Q9BQJ4 181 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 CENPOQ9BU64 300 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 DNAJC17Q9NVM6 304 aaKnown RBP12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 CYP39A1Q9NYL5 469 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 ACADSP16219 412 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 EIF4A3P38919 411 aaKnown RBP12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 TUFMP49411 452 aaKnown RBP12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 PLTPP55058 493 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 MAP3K10Q02779 954 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 RRP1BQ14684 758 aaKnown RBP12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 SGSM1Q2NKQ1 1148 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 ERMARDQ5T6L9 678 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 SREK1Q8WXA9 508 aaKnown RBP12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 DHRS1Q96LJ7 313 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 PCDH18Q9HCL0 1135 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 NMRK1Q9NWW6 199 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 SUN2Q9UH99 717 aa12.49□□□□□ -0.41
LDLRAD3-201ENST00000315571 CALM1P0DP23 149 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 CALM2P0DP24 149 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 CALM3P0DP25 149 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 CCR3P51677 355 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 CD302Q8IX05 232 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 LRRC47Q8N1G4 583 aaKnown RBP12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 MB21D1Q8N884 522 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 CFAP61Q8NHU2 1237 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 SPIRE2Q8WWL2 714 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 TTC1Q99614 292 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 FZD1Q9UP38 647 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 SPECC1L-ADORA2AF8WAN1 911 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 GNA14O95837 355 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 KIF11P52732 1056 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 GRIN1Q05586 938 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 SSRP1Q08945 709 aaKnown RBP12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 ZBTB17Q13105 803 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 CUL1Q13616 776 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 ITGA7Q13683 1181 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 RTN1Q16799 776 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 C14orf80Q86SX3 495 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 DIS3L2Q8IYB7 885 aaKnown RBP12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 LRRC37BQ96QE4 947 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 CSRNP2Q9H175 543 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 TUBGCP4Q9UGJ1 667 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 ASB3Q9Y575 518 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 ANKRD62A6NC57 917 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 BOLA2-SMG1P6H3BVE0 249 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 PSMA7O14818 248 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 SART1O43290 800 aaKnown RBP12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 DDAH1O94760 285 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 LMNAP02545 664 aaKnown RBP12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 CD44P16070 742 aaKnown RBP12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 YY1P25490 414 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 BTKQ06187 659 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 KPNB1Q14974 876 aaKnown RBP12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 TMEM132AQ24JP5 1023 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 USP49Q70CQ1 688 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 CSGALNACT2Q8N6G5 542 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 USP6NLQ92738 828 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 FMO2Q99518 471 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 COMMD3-BMI1R4GMX3 469 aa12.48□□□□□ -0.41
LDLRAD3-201ENST00000315571 IGKV6D-41A0A0C4DH26 115 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 A6NJR5 290 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 TJP3O95049 919 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 STAMBPO95630 424 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 ITGA2BP08514 1039 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 IREB2P48200 963 aaKnown RBP12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 BYSLQ13895 437 aaKnown RBP12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 TMEM53Q6P2H8 277 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 ISLR2Q6UXK2 745 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 ANKS1AQ92625 1134 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 AGBL1Q96MI9 1066 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 PITPNM3Q9BZ71 974 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 DCLRE1BQ9H816 532 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 DOLKQ9UPQ8 538 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 PLEKP08567 350 aaPredicted RBP12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 DNM2P50570 870 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 TSPY1Q01534 308 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 EPSTI1Q96J88 318 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 NYAP2Q9P242 653 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 AMACRQ9UHK6 382 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 LRRC42Q9Y546 428 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 C5orf60A6NFR6 353 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 ACTN4O43707 911 aaKnown RBP12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 PALMO75781 387 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 EPHB2P29323 1055 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 HSPA9P38646 679 aaKnown RBP12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 JAG1P78504 1218 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 ANO5Q75V66 913 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 SESTD1Q86VW0 696 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 PLIN2Q99541 437 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 EXOC1Q9NV70 894 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 CSADQ9Y600 493 aa12.47□□□□□ -0.41
LDLRAD3-201ENST00000315571 TRIM49BA6NDI0 452 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 SNX3O60493 162 aa12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 RFC1P35251 1148 aaPredicted RBP12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 EIF3BP55884 814 aaKnown RBP12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 AGGF1Q8N302 714 aaeCLIP12.46□□□□□ -0.41
LDLRAD3-201ENST00000315571 FANCBQ8NB91 859 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms