RNA–Protein interactions for RNA: ENST00000313050.11

SEC16A-203, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SEC16A, Length 8,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-203ENST00000313050 GGT7Q9UJ14 662 aa11.1□□□□□ -0.63
SEC16A-203ENST00000313050 CPSF3Q9UKF6 684 aaKnown RBP11.1□□□□□ -0.63
SEC16A-203ENST00000313050 ATAD2BQ9ULI0 1458 aa11.1□□□□□ -0.63
SEC16A-203ENST00000313050 A0A0G2JPF8 293 aa11.1□□□□□ -0.63
SEC16A-203ENST00000313050 FAM92AA1XBS5 289 aa11.1□□□□□ -0.63
SEC16A-203ENST00000313050 SYNDIG1LA6NDD5 238 aa11.1□□□□□ -0.63
SEC16A-203ENST00000313050 HNRNPCL3B7ZW38 293 aa11.1□□□□□ -0.63
SEC16A-203ENST00000313050 HNRNPCL4P0DMR1 293 aa11.1□□□□□ -0.63
SEC16A-203ENST00000313050 HOXC8P31273 242 aa11.1□□□□□ -0.63
SEC16A-203ENST00000313050 DNAJC24Q6P3W2 148 aa11.1□□□□□ -0.63
SEC16A-203ENST00000313050 HECW1Q76N89 1606 aa11.1□□□□□ -0.63
SEC16A-203ENST00000313050 PRPSAP2O60256 369 aa11.1□□□□□ -0.63
SEC16A-203ENST00000313050 LIG4P49917 911 aa11.1□□□□□ -0.63
SEC16A-203ENST00000313050 ITGADQ13349 1161 aa11.1□□□□□ -0.63
SEC16A-203ENST00000313050 MAN2A1Q16706 1144 aa11.1□□□□□ -0.63
SEC16A-203ENST00000313050 MRPL48Q96GC5 212 aaKnown RBP11.1□□□□□ -0.63
SEC16A-203ENST00000313050 KLHL32Q96NJ5 620 aa11.1□□□□□ -0.63
SEC16A-203ENST00000313050 FSD1LQ9BXM9 530 aa11.1□□□□□ -0.63
SEC16A-203ENST00000313050 USP44Q9H0E7 712 aa11.1□□□□□ -0.63
SEC16A-203ENST00000313050 CDYLQ9Y232 598 aa11.1□□□□□ -0.63
SEC16A-203ENST00000313050 SNX14Q9Y5W7 946 aa11.1□□□□□ -0.63
SEC16A-203ENST00000313050 ARHGEF37A1IGU5 675 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 GSTT1P30711 240 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 ZBED6P86452 979 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 TXNDC2Q86VQ3 553 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.09□□□□□ -0.63
SEC16A-203ENST00000313050 LRRN2O75325 713 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 PALMO75781 387 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 MAGEA10P43363 369 aaPredicted RBP11.09□□□□□ -0.63
SEC16A-203ENST00000313050 ITGA1P56199 1179 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 KRT33BQ14525 404 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 PMF1Q6P1K2 205 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 ZNF804AQ7Z570 1209 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 TEX13BQ9BXU2 312 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 FAM47DPA6NHR8 397 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 K7ENM7 598 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 KLHL41O60662 606 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 HSMCR30P0CW71 290 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 S100A2P29034 98 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 LRRC6Q86X45 466 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 RNFT2Q96EX2 444 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 AVENQ9NQS1 362 aaPredicted RBP11.09□□□□□ -0.63
SEC16A-203ENST00000313050 EIF4A3P38919 411 aaKnown RBP11.09□□□□□ -0.63
SEC16A-203ENST00000313050 ZNF57Q68EA5 555 aaPredicted RBP11.09□□□□□ -0.63
SEC16A-203ENST00000313050 IFNEQ86WN2 208 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 UBXN6Q9BZV1 441 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 RABL2AQ9UBK7 228 aaPredicted RBP11.09□□□□□ -0.63
SEC16A-203ENST00000313050 TRMT6Q9UJA5 497 aaKnown RBP11.09□□□□□ -0.63
SEC16A-203ENST00000313050 UBN2Q6ZU65 1347 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 ZMYM4Q5VZL5 1548 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 PTCD1O75127 700 aaKnown RBP11.09□□□□□ -0.63
SEC16A-203ENST00000313050 KRT36O76013 467 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 RTN3O95197 1032 aaPredicted RBP11.09□□□□□ -0.63
SEC16A-203ENST00000313050 ATG14Q6ZNE5 492 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 PPP1R36Q96LQ0 422 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 VPS11Q9H270 941 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 V9GY48 417 aaPredicted RBP11.09□□□□□ -0.63
SEC16A-203ENST00000313050 FAM58BPP0C7Q3 252 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 CCDC130P13994 396 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 CPA1P15085 419 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 VBP1P61758 197 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 C15orf59Q2T9L4 293 aaPredicted RBP11.09□□□□□ -0.63
SEC16A-203ENST00000313050 TPH2Q8IWU9 490 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 CCDC33Q8N5R6 958 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 GRPEL2Q8TAA5 225 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 MAGEB5Q9BZ81 275 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 KRCC1Q9NPI7 259 aaPredicted RBP11.09□□□□□ -0.63
SEC16A-203ENST00000313050 MYL1P05976 194 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 TARSP26639 723 aaKnown RBP11.09□□□□□ -0.63
SEC16A-203ENST00000313050 COPAP53621 1224 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 GMFBP60983 142 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 LRIG3Q6UXM1 1119 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 SYTL1Q8IYJ3 562 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 PIGOQ8TEQ8 1089 aa11.09□□□□□ -0.63
SEC16A-203ENST00000313050 GGPS1O95749 300 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 EIF2B5Q13144 721 aaKnown RBP11.08□□□□□ -0.64
SEC16A-203ENST00000313050 RHPN2Q8IUC4 686 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 JPH4Q96JJ6 628 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 PLEKHA5Q9HAU0 1116 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 HSF2Q03933 536 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 AGBL2Q5U5Z8 902 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 RNF19BQ6ZMZ0 732 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 C17orf80Q9BSJ5 609 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 COMMD9Q9P000 198 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 MAD2L2Q9UI95 211 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 SF3B1O75533 1304 aaKnown RBP eCLIP11.08□□□□□ -0.644e-7■■■■■ 122.3
SEC16A-203ENST00000313050 SYNJ2BP-COX16A0A087WUM0 186 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 ARHGEF33A8MVX0 844 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 B4E1Z4 1266 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 PPCSQ9HAB8 311 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 TIMMDC1Q9NPL8 285 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 COX16Q9P0S2 106 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 AIM2O14862 343 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 SNX30Q5VWJ9 437 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 KRT40Q6A162 431 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 LPIN2Q92539 896 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 TMEM79Q9BSE2 394 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 RGS12O14924 1447 aa11.08□□□□□ -0.64
SEC16A-203ENST00000313050 MIF4GDA9UHW6 222 aaKnown RBP11.08□□□□□ -0.64
SEC16A-203ENST00000313050 ECE2O60344 883 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms