RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 NOTUMQ6P988 496 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 CABP7Q86V35 215 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 SUGP1Q8IWZ8 645 aaKnown RBP9.05□□□□□ -0.96
TPM3-203ENST00000312970 FBXL6Q8N531 539 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 C12orf76Q8N812 135 aaPredicted RBP9.05□□□□□ -0.96
TPM3-203ENST00000312970 SMG8Q8ND04 991 aaKnown RBP9.05□□□□□ -0.96
TPM3-203ENST00000312970 BCL7CQ8WUZ0 217 aaPredicted RBP9.05□□□□□ -0.96
TPM3-203ENST00000312970 CCDC51Q96ER9 411 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 CCDC43Q96MW1 224 aaKnown RBP9.05□□□□□ -0.96
TPM3-203ENST00000312970 MTMR9Q96QG7 549 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 PRRX2Q99811 253 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 VN1R3Q9BXE9 311 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 EMILIN2Q9BXX0 1053 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 CSRNP2Q9H175 543 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 POMKQ9H5K3 350 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 XPNPEP1Q9NQW7 623 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 MRPL17Q9NRX2 175 aaKnown RBP9.05□□□□□ -0.96
TPM3-203ENST00000312970 SSX2IPQ9Y2D8 614 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 IPPQ9Y573 584 aa9.05□□□□□ -0.96
TPM3-203ENST00000312970 A0A087WWV3 80 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 ARL5CA6NH57 179 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 INPPL1O15357 1258 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 B4GALT3O60512 393 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 TSPAN1O60635 241 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 LILRB3O75022 631 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 NR1I2O75469 434 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 SSBP05455 408 aaKnown RBP eCLIP9.04□□□□□ -0.96
TPM3-203ENST00000312970 CNPP09543 421 aaKnown RBP9.04□□□□□ -0.96
TPM3-203ENST00000312970 WEE2P0C1S8 567 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 ATP2B1P20020 1258 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 SP100P23497 879 aaPredicted RBP9.04□□□□□ -0.96
TPM3-203ENST00000312970 RARRES1P49788 294 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 FOSBP53539 338 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 CAPSQ13938 189 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 SAFBQ15424 915 aaKnown RBP eCLIP9.04□□□□□ -0.96
TPM3-203ENST00000312970 PTPN14Q15678 1187 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 KIAA1841Q6NSI8 718 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 KANK3Q6NY19 840 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 COLGALT2Q8IYK4 626 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 HACE1Q8IYU2 909 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 ASAP3Q8TDY4 903 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 PIGOQ8TEQ8 1089 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 ASIC4Q96FT7 647 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 CPB2Q96IY4 423 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 KLHL5Q96PQ7 755 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 EIF2AQ9BY44 585 aaKnown RBP9.04□□□□□ -0.96
TPM3-203ENST00000312970 NFKBIZQ9BYH8 718 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 TRIM6Q9C030 488 aaPredicted RBP9.04□□□□□ -0.96
TPM3-203ENST00000312970 MIOSQ9NXC5 875 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 CDH22Q9UJ99 828 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 DBR1Q9UK59 544 aaKnown RBP9.04□□□□□ -0.96
TPM3-203ENST00000312970 LIMCH1Q9UPQ0 1083 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 MYO10Q9HD67 2058 aa9.04□□□□□ -0.96
TPM3-203ENST00000312970 EP300Q09472 2414 aaPredicted RBP9.04□□□□□ -0.96
TPM3-203ENST00000312970 A0A1B0GUA9 196 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 C2CD4DB7Z1M9 353 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 WNT7AO00755 349 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 SOD2P04179 222 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 SPATA31C1P0DKV0 1188 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 ARF4P18085 180 aaPredicted RBP9.03□□□□□ -0.96
TPM3-203ENST00000312970 GLRA2P23416 452 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 MCM7P33993 719 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 OR1G1P47890 313 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 CLCN4P51793 760 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 VCPP55072 806 aaKnown RBP9.03□□□□□ -0.96
TPM3-203ENST00000312970 MBTD1Q05BQ5 628 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 DSG2Q14126 1118 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 SLC27A1Q6PCB7 646 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 TMC5Q6UXY8 1006 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 TAS1R1Q7RTX1 841 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 GPR149Q86SP6 731 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 CATSPER3Q86XQ3 398 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 UBALD2Q8IYN6 164 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 ZDHHC14Q8IZN3 488 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 KREMEN2Q8NCW0 462 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 ATOH1Q92858 354 aaPredicted RBP9.03□□□□□ -0.96
TPM3-203ENST00000312970 NACC1Q96RE7 527 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 GAD1Q99259 594 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 POLR3CQ9BUI4 534 aaPredicted RBP9.03□□□□□ -0.96
TPM3-203ENST00000312970 COLEC11Q9BWP8 271 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 TMEM60Q9H2L4 133 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 TUFT1Q9NNX1 390 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 LIMD1Q9UGP4 676 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 SORCS3Q9UPU3 1222 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 USTQ9Y2C2 406 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 GIT1Q9Y2X7 761 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 HES2Q9Y543 173 aa9.03□□□□□ -0.96
TPM3-203ENST00000312970 KMT2BQ9UMN6 2715 aaPredicted RBP9.02□□□□□ -0.97
TPM3-203ENST00000312970 POTEMA6NI47 508 aa9.02□□□□□ -0.97
TPM3-203ENST00000312970 H0Y858 1186 aa9.02□□□□□ -0.97
TPM3-203ENST00000312970 C2CD2LO14523 706 aa9.02□□□□□ -0.97
TPM3-203ENST00000312970 MAP3K13O43283 966 aa9.02□□□□□ -0.97
TPM3-203ENST00000312970 B4GALT5O43286 388 aa9.02□□□□□ -0.97
TPM3-203ENST00000312970 USO1O60763 962 aaKnown RBP9.02□□□□□ -0.97
TPM3-203ENST00000312970 SEC24BO95487 1268 aa9.02□□□□□ -0.97
TPM3-203ENST00000312970 EFEMP2O95967 443 aa9.02□□□□□ -0.97
TPM3-203ENST00000312970 URODP06132 367 aa9.02□□□□□ -0.97
TPM3-203ENST00000312970 ADH1AP07327 375 aa9.02□□□□□ -0.97
TPM3-203ENST00000312970 AKAP5P24588 427 aa9.02□□□□□ -0.97
TPM3-203ENST00000312970 AVPR2P30518 371 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms