RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 ALDH1A1P00352 501 aa18.14■□□□□ 0.49
CLCF1-201ENST00000312438 ANXA13P27216 316 aa18.14■□□□□ 0.49
CLCF1-201ENST00000312438 CYP2C19P33261 490 aa18.14■□□□□ 0.49
CLCF1-201ENST00000312438 SOX5P35711 763 aa18.14■□□□□ 0.49
CLCF1-201ENST00000312438 PTENP60484 403 aa18.14■□□□□ 0.49
CLCF1-201ENST00000312438 CLDN10P78369 228 aa18.14■□□□□ 0.49
CLCF1-201ENST00000312438 DRAP1Q14919 205 aaPredicted RBP18.14■□□□□ 0.49
CLCF1-201ENST00000312438 SLC18A3Q16572 532 aa18.14■□□□□ 0.49
CLCF1-201ENST00000312438 NLRP4Q96MN2 994 aa18.14■□□□□ 0.49
CLCF1-201ENST00000312438 NFKBIZQ9BYH8 718 aa18.14■□□□□ 0.49
CLCF1-201ENST00000312438 HAPLN2Q9GZV7 340 aa18.14■□□□□ 0.49
CLCF1-201ENST00000312438 LACRTQ9GZZ8 138 aa18.14■□□□□ 0.49
CLCF1-201ENST00000312438 FZD8Q9H461 694 aa18.14■□□□□ 0.49
CLCF1-201ENST00000312438 ZNF236Q9UL36 1845 aa18.13■□□□□ 0.49
CLCF1-201ENST00000312438 MCM3APO60318 1980 aa18.13■□□□□ 0.49
CLCF1-201ENST00000312438 F8VZ95 297 aa18.13■□□□□ 0.49
CLCF1-201ENST00000312438 ACKR2O00590 384 aa18.13■□□□□ 0.49
CLCF1-201ENST00000312438 URI1O94763 535 aaPredicted RBP18.13■□□□□ 0.49
CLCF1-201ENST00000312438 EDN1P05305 212 aa18.13■□□□□ 0.49
CLCF1-201ENST00000312438 PRKCBP05771 671 aa18.13■□□□□ 0.49
CLCF1-201ENST00000312438 DLATP10515 647 aaKnown RBP18.13■□□□□ 0.49
CLCF1-201ENST00000312438 ACOT2P49753 483 aa18.13■□□□□ 0.49
CLCF1-201ENST00000312438 MAP2K1Q02750 393 aaPredicted RBP18.13■□□□□ 0.49
CLCF1-201ENST00000312438 PTK2Q05397 1052 aa18.13■□□□□ 0.49
CLCF1-201ENST00000312438 CCL14Q16627 93 aa18.13■□□□□ 0.49
CLCF1-201ENST00000312438 MTHFD1LQ6UB35 978 aa18.13■□□□□ 0.49
CLCF1-201ENST00000312438 CRELD2Q6UXH1 353 aaPredicted RBP18.13■□□□□ 0.49
CLCF1-201ENST00000312438 SV2AQ7L0J3 742 aa18.13■□□□□ 0.49
CLCF1-201ENST00000312438 LINC01465Q8N7H1 131 aa18.13■□□□□ 0.49
CLCF1-201ENST00000312438 FNBP1Q96RU3 617 aa18.13■□□□□ 0.49
CLCF1-201ENST00000312438 ZIC5Q96T25 663 aa18.13■□□□□ 0.49
CLCF1-201ENST00000312438 ACO2Q99798 780 aaKnown RBP18.13■□□□□ 0.49
CLCF1-201ENST00000312438 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.13■□□□□ 0.49
CLCF1-201ENST00000312438 UBE2TQ9NPD8 197 aaPredicted RBP18.13■□□□□ 0.49
CLCF1-201ENST00000312438 ANKFY1Q9P2R3 1169 aa18.13■□□□□ 0.49
CLCF1-201ENST00000312438 ADAMTS1Q9UHI8 967 aa18.13■□□□□ 0.49
CLCF1-201ENST00000312438 Q9Y3F1 56 aa18.13■□□□□ 0.49
CLCF1-201ENST00000312438 PLXNA1Q9UIW2 1896 aa18.13■□□□□ 0.49
CLCF1-201ENST00000312438 RCCD1A6NED2 376 aa18.12■□□□□ 0.49
CLCF1-201ENST00000312438 IGHA2P01877 340 aa18.12■□□□□ 0.49
CLCF1-201ENST00000312438 NLRP11P59045 1033 aaKnown RBP18.12■□□□□ 0.49
CLCF1-201ENST00000312438 ENOX2Q16206 610 aaKnown RBP18.12■□□□□ 0.49
CLCF1-201ENST00000312438 PAXIP1Q6ZW49 1069 aaPredicted RBP18.12■□□□□ 0.49
CLCF1-201ENST00000312438 FBXL13Q8NEE6 735 aa18.12■□□□□ 0.49
CLCF1-201ENST00000312438 ZBTB10Q96DT7 871 aa18.12■□□□□ 0.49
CLCF1-201ENST00000312438 TCHPQ9BT92 498 aa18.12■□□□□ 0.49
CLCF1-201ENST00000312438 RAB20Q9NX57 234 aa18.12■□□□□ 0.49
CLCF1-201ENST00000312438 TRIM10Q9UDY6 481 aa18.12■□□□□ 0.49
CLCF1-201ENST00000312438 RRN3P2A6NIE6 340 aa18.12■□□□□ 0.49
CLCF1-201ENST00000312438 GFPT2O94808 682 aa18.12■□□□□ 0.49
CLCF1-201ENST00000312438 GJB1P08034 283 aa18.12■□□□□ 0.49
CLCF1-201ENST00000312438 GPC3P51654 580 aa18.12■□□□□ 0.49
CLCF1-201ENST00000312438 PPFIA1Q13136 1202 aa18.12■□□□□ 0.49
CLCF1-201ENST00000312438 C10orf76Q5T2E6 689 aa18.12■□□□□ 0.49
CLCF1-201ENST00000312438 TSHZ1Q6ZSZ6 1077 aa18.12■□□□□ 0.49
CLCF1-201ENST00000312438 ZNF571Q7Z3V5 609 aaPredicted RBP18.12■□□□□ 0.49
CLCF1-201ENST00000312438 VPS36Q86VN1 386 aa18.12■□□□□ 0.49
CLCF1-201ENST00000312438 SLC35F6Q8N357 371 aa18.12■□□□□ 0.49
CLCF1-201ENST00000312438 RBAKQ9NYW8 714 aaPredicted RBP18.12■□□□□ 0.49
CLCF1-201ENST00000312438 TFR2Q9UP52 801 aa18.12■□□□□ 0.49
CLCF1-201ENST00000312438 A0A087X0T9 212 aa18.11■□□□□ 0.49
CLCF1-201ENST00000312438 INO80B-WBP1J3KQ70 363 aa18.11■□□□□ 0.49
CLCF1-201ENST00000312438 PJA2O43164 708 aa18.11■□□□□ 0.49
CLCF1-201ENST00000312438 FAM228BP0C875 321 aa18.11■□□□□ 0.49
CLCF1-201ENST00000312438 PHKA2P46019 1235 aa18.11■□□□□ 0.49
CLCF1-201ENST00000312438 GRM1Q13255 1194 aa18.11■□□□□ 0.49
CLCF1-201ENST00000312438 GRIK4Q16099 956 aa18.11■□□□□ 0.49
CLCF1-201ENST00000312438 TLK2Q86UE8 772 aa18.11■□□□□ 0.49
CLCF1-201ENST00000312438 IFNLR1Q8IU57 520 aaPredicted RBP18.11■□□□□ 0.49
CLCF1-201ENST00000312438 INO80BQ9C086 356 aaPredicted RBP18.11■□□□□ 0.49
CLCF1-201ENST00000312438 GPR88Q9GZN0 384 aa18.11■□□□□ 0.49
CLCF1-201ENST00000312438 CTAGE9A4FU28 777 aa18.1■□□□□ 0.49
CLCF1-201ENST00000312438 TTLL13PA6NNM8 815 aa18.1■□□□□ 0.49
CLCF1-201ENST00000312438 EVI5O60447 810 aa18.1■□□□□ 0.49
CLCF1-201ENST00000312438 TNNI1P19237 187 aa18.1■□□□□ 0.49
CLCF1-201ENST00000312438 FCGRTP55899 365 aa18.1■□□□□ 0.49
CLCF1-201ENST00000312438 MCL1Q07820 350 aa18.1■□□□□ 0.49
CLCF1-201ENST00000312438 PRPF4BQ13523 1007 aaKnown RBP18.1■□□□□ 0.49
CLCF1-201ENST00000312438 ARHGAP44Q17R89 818 aa18.1■□□□□ 0.49
CLCF1-201ENST00000312438 CYP4F22Q6NT55 531 aa18.1■□□□□ 0.49
CLCF1-201ENST00000312438 C15orf39Q6ZRI6 1047 aa18.1■□□□□ 0.49
CLCF1-201ENST00000312438 SEMA4DQ92854 862 aa18.1■□□□□ 0.49
CLCF1-201ENST00000312438 IFT122Q9HBG6 1241 aa18.1■□□□□ 0.49
CLCF1-201ENST00000312438 TOPORSQ9NS56 1045 aaPredicted RBP18.1■□□□□ 0.49
CLCF1-201ENST00000312438 PRMT7Q9NVM4 692 aaPredicted RBP18.1■□□□□ 0.49
CLCF1-201ENST00000312438 AKT3Q9Y243 479 aa18.1■□□□□ 0.49
CLCF1-201ENST00000312438 FOXN3O00409 490 aaPredicted RBP18.09■□□□□ 0.49
CLCF1-201ENST00000312438 CTIFO43310 598 aaKnown RBP18.09■□□□□ 0.49
CLCF1-201ENST00000312438 ZC3H11AO75152 810 aaKnown RBP eCLIP18.09■□□□□ 0.49
CLCF1-201ENST00000312438 LRRN2O75325 713 aa18.09■□□□□ 0.49
CLCF1-201ENST00000312438 TOMM70O94826 608 aa18.09■□□□□ 0.49
CLCF1-201ENST00000312438 SLU7O95391 586 aaKnown RBP18.09■□□□□ 0.49
CLCF1-201ENST00000312438 MFAP3P55082 362 aa18.09■□□□□ 0.49
CLCF1-201ENST00000312438 MBTD1Q05BQ5 628 aa18.09■□□□□ 0.49
CLCF1-201ENST00000312438 NOGQ13253 232 aa18.09■□□□□ 0.49
CLCF1-201ENST00000312438 TUBB2AQ13885 445 aa18.09■□□□□ 0.49
CLCF1-201ENST00000312438 BMS1Q14692 1282 aaKnown RBP18.09■□□□□ 0.49
CLCF1-201ENST00000312438 MARCH8Q5T0T0 291 aa18.09■□□□□ 0.49
CLCF1-201ENST00000312438 ATF7IP2Q5U623 682 aa18.09■□□□□ 0.49
CLCF1-201ENST00000312438 ARHGEF19Q8IW93 802 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms