RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 ARHGAP4P98171 946 aa20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 PICALMQ13492 652 aa20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 NUGGCQ68CJ6 796 aa20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 DYDC1Q8WWB3 177 aa20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 UTP4Q969X6 686 aaKnown RBP20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 SLC35C1Q96A29 364 aa20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 POLR3CQ9BUI4 534 aaPredicted RBP20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 COA1Q9GZY4 146 aa20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 OLFML3Q9NRN5 406 aa20.26■□□□□ 0.83
HERPUD2-201ENST00000311350 AKAP3O75969 853 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 AGTP01019 485 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 CIITAP33076 1130 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 SLC16A2P36021 539 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 STAT1P42224 750 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 ZNF131P52739 623 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 AUHQ13825 339 aaKnown RBP20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 GJB7Q6PEY0 223 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 EXOC3L1Q86VI1 746 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 CLEC10AQ8IUN9 316 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 SLC30A5Q8TAD4 765 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 TRPM4Q8TD43 1214 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 KLRG1Q96E93 195 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 BORCS6Q96GS4 357 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 ZCWPW1Q9H0M4 648 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 CREBZFQ9NS37 354 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 PCDHA1Q9Y5I3 950 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 ASTN1O14525 1302 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 USP17L15C9J2P7 530 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 USP17L13C9JLJ4 530 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 USP17L11C9JVI0 530 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 USP17L18D6R9N7 530 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 USP17L22D6RA61 530 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 USP17L17D6RBQ6 530 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 USP17L19D6RCP7 530 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 USP17L20D6RJB6 530 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 DDX3XO00571 662 aaKnown RBP eCLIP20.25■□□□□ 0.831e-6■■■■□ 21.8
HERPUD2-201ENST00000311350 FESP07332 822 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 STAT3P40763 770 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 PTENP60484 403 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 ATP11AP98196 1134 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 MGAT5Q09328 741 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 USP17L24Q0WX57 530 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 SLC30A9Q6PML9 568 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 USP17L6PQ6QN14 398 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 KCTD1Q719H9 257 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 ANKLE1Q8NAG6 615 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 U2AF1L4Q8WU68 220 aaKnown RBP20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 MKNK1Q9BUB5 465 aa20.25■□□□□ 0.83
HERPUD2-201ENST00000311350 MEIS2O14770 477 aa20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 KIAA0391O15091 583 aaKnown RBP20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 LACTBP83111 547 aaPredicted RBP20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 C6orf118Q5T5N4 469 aa20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 RSBN1LQ6PCB5 846 aaPredicted RBP20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 JAMLQ86YT9 394 aa20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 GDAP1Q8TB36 358 aa20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 C18orf8Q96DM3 657 aa20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 ZHX3Q9H4I2 956 aa20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 NYAP2Q9P242 653 aa20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 AMFRQ9UKV5 643 aa20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 UBE4BO95155 1302 aa20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 DDX3YO15523 660 aaKnown RBP20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 EYA4O95677 639 aa20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 TMEM253P0C7T8 217 aa20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 SREBF1P36956 1147 aa20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 HIRAP54198 1017 aaPredicted RBP20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 KIAA1755Q5JYT7 1200 aa20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 ANKRD42Q8N9B4 389 aa20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 NAP1L3Q99457 506 aaPredicted RBP20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 GRHL1Q9NZI5 618 aa20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 GCNT4Q9P109 453 aa20.24■□□□□ 0.83
HERPUD2-201ENST00000311350 SCN9AQ15858 1988 aa20.23■□□□□ 0.83
HERPUD2-201ENST00000311350 AHCYL1O43865 530 aa20.23■□□□□ 0.83
HERPUD2-201ENST00000311350 SMIM24O75264 130 aa20.23■□□□□ 0.83
HERPUD2-201ENST00000311350 SUN1O94901 812 aa20.23■□□□□ 0.83
HERPUD2-201ENST00000311350 RPS6KA3P51812 740 aa20.23■□□□□ 0.83
HERPUD2-201ENST00000311350 CCNG1P51959 295 aa20.23■□□□□ 0.83
HERPUD2-201ENST00000311350 ZC3H15Q8WU90 426 aaKnown RBP20.23■□□□□ 0.83
HERPUD2-201ENST00000311350 LENG9Q96B70 501 aa20.23■□□□□ 0.83
HERPUD2-201ENST00000311350 PAPOLBQ9NRJ5 636 aaKnown RBP20.23■□□□□ 0.83
HERPUD2-201ENST00000311350 IGSF9BQ9UPX0 1349 aa20.23■□□□□ 0.83
HERPUD2-201ENST00000311350 GH1P01241 217 aa20.22■□□□□ 0.83
HERPUD2-201ENST00000311350 PAPOLAP51003 745 aaKnown RBP20.22■□□□□ 0.83
HERPUD2-201ENST00000311350 ARMC3Q5W041 872 aa20.22■□□□□ 0.83
HERPUD2-201ENST00000311350 HHIPL2Q6UWX4 724 aa20.22■□□□□ 0.83
HERPUD2-201ENST00000311350 SAMD7Q7Z3H4 446 aa20.22■□□□□ 0.83
HERPUD2-201ENST00000311350 AGBL3Q8NEM8 1001 aa20.22■□□□□ 0.83
HERPUD2-201ENST00000311350 RFFLQ8WZ73 363 aa20.22■□□□□ 0.83
HERPUD2-201ENST00000311350 TSC22D3Q99576 134 aa20.22■□□□□ 0.83
HERPUD2-201ENST00000311350 SYT15Q9BQS2 421 aa20.22■□□□□ 0.83
HERPUD2-201ENST00000311350 STK33Q9BYT3 514 aa20.22■□□□□ 0.83
HERPUD2-201ENST00000311350 USP40Q9NVE5 1235 aa20.22■□□□□ 0.83
HERPUD2-201ENST00000311350 RASGRF2O14827 1237 aa20.22■□□□□ 0.83
HERPUD2-201ENST00000311350 NEFHP12036 1026 aa20.22■□□□□ 0.83
HERPUD2-201ENST00000311350 GNAZP19086 355 aa20.22■□□□□ 0.83
HERPUD2-201ENST00000311350 RPL21P46778 160 aaKnown RBP20.22■□□□□ 0.83
HERPUD2-201ENST00000311350 GALCP54803 685 aa20.22■□□□□ 0.83
HERPUD2-201ENST00000311350 GTF2IP78347 998 aa20.22■□□□□ 0.83
HERPUD2-201ENST00000311350 PABPC4Q13310 644 aaKnown RBP eCLIP20.22■□□□□ 0.83
HERPUD2-201ENST00000311350 LONRF1Q17RB8 773 aa20.22■□□□□ 0.83
HERPUD2-201ENST00000311350 DCAF17Q5H9S7 520 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms