RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 CLTAP09496 248 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 PPM1AP35813 382 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 NPY2RP49146 381 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 KLHDC4Q8TBB5 520 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 PYROXD1Q8WU10 500 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 RAB23Q9ULC3 237 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 TMEM131LA2VDJ0 1609 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 RSPH10B2B2RC85 870 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 RSPH10BP0C881 870 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 PSMA2P25787 234 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 LHX1P48742 406 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 INPP1P49441 399 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 ZNF75DP51815 510 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 COPB1P53618 953 aaKnown RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 BACE1P56817 501 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 EDRF1Q3B7T1 1238 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 NBPF20Q3BBV1 942 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 HSP90AA4PQ58FG1 418 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 DCAF6Q58WW2 860 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 ALS2CLQ60I27 953 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 ZDHHC17Q8IUH5 632 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 CCNJLQ8IV13 435 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 LRRC8AQ8IWT6 810 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 TRMT2AQ8IZ69 625 aaKnown RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 AFG1LQ8WV93 481 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 DEFB129Q9H1M3 183 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 ABHD16BQ9H3Z7 469 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 SP110Q9HB58 689 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 OLA1Q9NTK5 396 aaKnown RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 AGO2Q9UKV8 859 aaKnown RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 CDV3Q9UKY7 258 aaKnown RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 C3P01024 1663 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 EYA4O95677 639 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 TFRCP02786 760 aaKnown RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 ODC1P11926 461 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 RLBP1P12271 317 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 EPHX2P34913 555 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 VAMP7P51809 220 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 SCRN1Q12765 414 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 DPYDQ12882 1025 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 MORF4L2Q15014 288 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 TMED2Q15363 201 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 KRT24Q2M2I5 525 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 PADI6Q6TGC4 694 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 C16orf86Q6ZW13 317 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 RRM2BQ7LG56 351 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 RHOT1Q8IXI2 618 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 GRAMD1AQ96CP6 724 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 APOL6Q9BWW8 343 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 FAM124BQ9H5Z6 455 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 SLC39A2Q9NP94 309 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 ARL4DP49703 201 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 ABCE1P61221 599 aaKnown RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 PPATQ06203 517 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 GRM4Q14833 912 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 TMEM132DQ14C87 1099 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 CES5AQ6NT32 575 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 DSG4Q86SJ6 1040 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 RFX6Q8HWS3 928 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 STX19Q8N4C7 294 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 APBB2Q92870 758 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 ULK4Q96C45 1275 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 C18orf8Q96DM3 657 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 YME1L1Q96TA2 773 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 RABEP2Q9H5N1 569 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 TDRD3Q9H7E2 651 aaKnown RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 FMN2Q9NZ56 1722 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 ARHGAP23Q9P227 1491 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 MYPNQ86TC9 1320 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 KNDC1Q76NI1 1749 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 ARHGAP10A1A4S6 786 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 ARHGAP42A6NI28 874 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 PSMD14O00487 310 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 GNGT2O14610 69 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 CHUKO15111 745 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 ZC3H11AO75152 810 aaKnown RBP eCLIP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 POMCP01189 267 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 GNA15P30679 374 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 NECTIN1Q15223 517 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 FAM83BQ5T0W9 1011 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 TIGD7Q6NT04 549 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 CRLF3Q8IUI8 442 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 CDKL3Q8IVW4 592 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 SCN4BQ8IWT1 228 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 LINC00301Q8NCQ3 95 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 ATL2Q8NHH9 583 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 POP5Q969H6 163 aaKnown RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 TMEM47Q9BQJ4 181 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 UBXN6Q9BZV1 441 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 GBA2Q9HCG7 927 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 FAF1Q9UNN5 650 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 CHMP2BQ9UQN3 213 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 CYP27B1O15528 508 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 DNAJC6O75061 913 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 FGF19O95750 216 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 LMNAP02545 664 aaKnown RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 RPN2P04844 631 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 EN1Q05925 392 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 ZNF235Q14590 738 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 SYT10Q6XYQ8 523 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms