RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 C18orf8Q96DM3 657 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 FNBP1Q96RU3 617 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 SH3GL2Q99962 352 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 SYT11Q9BT88 431 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 POLR3FQ9H1D9 316 aaPredicted RBP12.43□□□□□ -0.42
PTPN2-201ENST00000309660 AS3MTQ9HBK9 375 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 RAB20Q9NX57 234 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 NCANO14594 1321 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 GJC1P36383 396 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 NCKAP1LP55160 1127 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 ACTR2P61160 394 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 MYBPC2Q14324 1141 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 ANKRD35Q8N283 1001 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 PIK3R5Q8WYR1 880 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 MAGOHBQ96A72 148 aaKnown RBP12.43□□□□□ -0.42
PTPN2-201ENST00000309660 LRRC45Q96CN5 670 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 A1CFQ9NQ94 594 aaKnown RBP12.43□□□□□ -0.42
PTPN2-201ENST00000309660 ANKEF1Q9NU02 776 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 SLC9A2Q9UBY0 812 aa12.43□□□□□ -0.42
PTPN2-201ENST00000309660 ZNF646O15015 1829 aaPredicted RBP12.43□□□□□ -0.42
PTPN2-201ENST00000309660 MYO1CO00159 1063 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 CES2O00748 559 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 LYPLA2O95372 231 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 PSAPP07602 524 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 MYZAPP0CAP1 466 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 NR1D1P20393 614 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 RFX1P22670 979 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 SSR1P43307 286 aaKnown RBP12.42□□□□□ -0.42
PTPN2-201ENST00000309660 ZNF564Q8TBZ8 553 aaPredicted RBP12.42□□□□□ -0.42
PTPN2-201ENST00000309660 DAAM1Q9Y4D1 1078 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 PCNTO95613 3336 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 TLDC2A0PJX2 215 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 NDUFAB1O14561 156 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 PPFIA4O75335 1185 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 RGS20O76081 388 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 MAPTP10636 758 aaKnown RBP12.42□□□□□ -0.42
PTPN2-201ENST00000309660 CYP11B1P15538 503 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 CNTN2Q02246 1040 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 SPOPLQ6IQ16 392 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 LLGL2Q6P1M3 1020 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 SLC39A4Q6P5W5 647 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 PASD1Q8IV76 773 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 MAP4K3Q8IVH8 894 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 CEP89Q96ST8 783 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 GGA3Q9NZ52 723 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 PFASO15067 1338 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 RTN2O75298 545 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 CHRNB2P17787 502 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 ECHS1P30084 290 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 KCNJ1P48048 391 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 SEL1L2Q5TEA6 688 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 KIFAP3Q92845 792 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 FAM212AQ96EL1 285 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 TEX13BQ9BXU2 312 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 CARD9Q9H257 536 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 SLITRK6Q9H5Y7 841 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 ZNF214Q9UL59 606 aaPredicted RBP12.42□□□□□ -0.42
PTPN2-201ENST00000309660 TRPC6Q9Y210 931 aa12.42□□□□□ -0.42
PTPN2-201ENST00000309660 FSTL1Q12841 308 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 KRT71Q3SY84 523 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 ZFYVE27Q5T4F4 411 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 DAB2IPQ5VWQ8 1189 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 SRLQ86TD4 932 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 CCDC25Q86WR0 208 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 RASGEF1CQ8N431 466 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 TRPM4Q8TD43 1214 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 ZNF526Q8TF50 670 aaPredicted RBP12.41□□□□□ -0.42
PTPN2-201ENST00000309660 ZNF668Q96K58 619 aaPredicted RBP12.41□□□□□ -0.42
PTPN2-201ENST00000309660 NAP1L3Q99457 506 aaPredicted RBP12.41□□□□□ -0.42
PTPN2-201ENST00000309660 FMO2Q99518 471 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 TMEM8AQ9HCN3 771 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 CYP26B1Q9NR63 512 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 CNOT8Q9UFF9 292 aaKnown RBP12.41□□□□□ -0.42
PTPN2-201ENST00000309660 P4HA2O15460 535 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 KCNA2P16389 499 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 ZNF280AP59817 542 aaPredicted RBP12.41□□□□□ -0.42
PTPN2-201ENST00000309660 FMO1Q01740 532 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 GNPTABQ3T906 1256 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 USP37Q86T82 979 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 CCDC105Q8IYK2 499 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 FAM71AQ8IYT1 594 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 GPD1LQ8N335 351 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 CPA5Q8WXQ8 436 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 ZBTB45Q96K62 511 aaPredicted RBP12.41□□□□□ -0.42
PTPN2-201ENST00000309660 ATP6V1G3Q96LB4 118 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 ACAD9Q9H845 621 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 ATP6V0A4Q9HBG4 840 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 PPANQ9NQ55 473 aaKnown RBP12.41□□□□□ -0.42
PTPN2-201ENST00000309660 XPNPEP1Q9NQW7 623 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 C1orf112Q9NSG2 853 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 TCRBV7S2A1N4TA0A589 114 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 ZBTB48P10074 688 aaPredicted RBP12.41□□□□□ -0.42
PTPN2-201ENST00000309660 HSPA9P38646 679 aaKnown RBP12.41□□□□□ -0.42
PTPN2-201ENST00000309660 STRN3Q13033 797 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 SNX1Q13596 522 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 UAP1Q16222 522 aaPredicted RBP12.41□□□□□ -0.42
PTPN2-201ENST00000309660 GPRASP2Q96D09 838 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 TCHPQ9BT92 498 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 TRIM7Q9C029 511 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 RAB17Q9H0T7 212 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms