RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 ARHGAP28Q9P2N2 729 aa21.88■■□□□ 1.09
PDZRN3-202ENST00000308537 CDH22Q9UJ99 828 aa21.88■■□□□ 1.09
PDZRN3-202ENST00000308537 TECTAO75443 2155 aa21.87■■□□□ 1.09
PDZRN3-202ENST00000308537 PTGESO14684 152 aa21.87■■□□□ 1.09
PDZRN3-202ENST00000308537 CXCL14O95715 111 aa21.87■■□□□ 1.09
PDZRN3-202ENST00000308537 ALDH2P05091 517 aa21.87■■□□□ 1.09
PDZRN3-202ENST00000308537 PRPF4BQ13523 1007 aaKnown RBP21.87■■□□□ 1.09
PDZRN3-202ENST00000308537 LLGL2Q6P1M3 1020 aa21.87■■□□□ 1.09
PDZRN3-202ENST00000308537 TAS1R1Q7RTX1 841 aa21.87■■□□□ 1.09
PDZRN3-202ENST00000308537 SYT2Q8N9I0 419 aaPredicted RBP21.87■■□□□ 1.09
PDZRN3-202ENST00000308537 DEPTORQ8TB45 409 aa21.87■■□□□ 1.09
PDZRN3-202ENST00000308537 SLC22A17Q8WUG5 538 aa21.87■■□□□ 1.09
PDZRN3-202ENST00000308537 TRIM6Q9C030 488 aaPredicted RBP21.87■■□□□ 1.09
PDZRN3-202ENST00000308537 KLK14Q9P0G3 267 aa21.87■■□□□ 1.09
PDZRN3-202ENST00000308537 FAN1Q9Y2M0 1017 aa21.87■■□□□ 1.09
PDZRN3-202ENST00000308537 PRG3Q9Y2Y8 225 aaPredicted RBP21.87■■□□□ 1.09
PDZRN3-202ENST00000308537 PLXNA3P51805 1871 aa21.87■■□□□ 1.09
PDZRN3-202ENST00000308537 ABLIM1O14639 778 aa21.86■■□□□ 1.09
PDZRN3-202ENST00000308537 N4BP3O15049 544 aa21.86■■□□□ 1.09
PDZRN3-202ENST00000308537 GUCY2CP25092 1073 aa21.86■■□□□ 1.09
PDZRN3-202ENST00000308537 PEX3P56589 373 aa21.86■■□□□ 1.09
PDZRN3-202ENST00000308537 RESTQ13127 1097 aa21.86■■□□□ 1.09
PDZRN3-202ENST00000308537 CBX2Q14781 532 aaPredicted RBP21.86■■□□□ 1.09
PDZRN3-202ENST00000308537 PTPAQ15257 358 aa21.86■■□□□ 1.09
PDZRN3-202ENST00000308537 KCTD17Q8N5Z5 321 aa21.86■■□□□ 1.09
PDZRN3-202ENST00000308537 PTPRHQ9HD43 1115 aa21.86■■□□□ 1.09
PDZRN3-202ENST00000308537 SNTG2Q9NY99 539 aa21.86■■□□□ 1.09
PDZRN3-202ENST00000308537 CACNG4Q9UBN1 327 aa21.86■■□□□ 1.09
PDZRN3-202ENST00000308537 VWA8A3KMH1 1905 aa21.85■■□□□ 1.09
PDZRN3-202ENST00000308537 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.85■■□□□ 1.09
PDZRN3-202ENST00000308537 LOC730098B7Z3J9 87 aa21.85■■□□□ 1.09
PDZRN3-202ENST00000308537 RECQL4O94761 1208 aa21.85■■□□□ 1.09
PDZRN3-202ENST00000308537 SOD2P04179 222 aa21.85■■□□□ 1.09
PDZRN3-202ENST00000308537 SYT1P21579 422 aa21.85■■□□□ 1.09
PDZRN3-202ENST00000308537 SSTR3P32745 418 aaPredicted RBP21.85■■□□□ 1.09
PDZRN3-202ENST00000308537 EFNA5P52803 228 aa21.85■■□□□ 1.09
PDZRN3-202ENST00000308537 GRIK3Q13003 919 aa21.85■■□□□ 1.09
PDZRN3-202ENST00000308537 SF3A1Q15459 793 aaKnown RBP21.85■■□□□ 1.09
PDZRN3-202ENST00000308537 ARSHQ5FYA8 562 aa21.85■■□□□ 1.09
PDZRN3-202ENST00000308537 INTS4Q96HW7 963 aaKnown RBP21.85■■□□□ 1.09
PDZRN3-202ENST00000308537 IFT74Q96LB3 600 aa21.85■■□□□ 1.09
PDZRN3-202ENST00000308537 AK8Q96MA6 479 aa21.85■■□□□ 1.09
PDZRN3-202ENST00000308537 PLIN2Q99541 437 aa21.85■■□□□ 1.09
PDZRN3-202ENST00000308537 PAAF1Q9BRP4 392 aa21.85■■□□□ 1.09
PDZRN3-202ENST00000308537 NTPCRQ9BSD7 190 aaKnown RBP21.85■■□□□ 1.09
PDZRN3-202ENST00000308537 BLOC1S4Q9NUP1 217 aa21.85■■□□□ 1.09
PDZRN3-202ENST00000308537 DENND4AQ7Z401 1863 aa21.85■■□□□ 1.09
PDZRN3-202ENST00000308537 EPCAMP16422 314 aa21.84■■□□□ 1.09
PDZRN3-202ENST00000308537 KLHL5Q96PQ7 755 aa21.84■■□□□ 1.09
PDZRN3-202ENST00000308537 FAM193BQ96PV7 902 aaPredicted RBP21.84■■□□□ 1.09
PDZRN3-202ENST00000308537 HERC2P3Q9BVR0 1158 aa21.84■■□□□ 1.09
PDZRN3-202ENST00000308537 TMEM134Q9H6X4 195 aa21.84■■□□□ 1.09
PDZRN3-202ENST00000308537 CHST7Q9NS84 486 aa21.84■■□□□ 1.09
PDZRN3-202ENST00000308537 PARP2Q9UGN5 583 aa21.84■■□□□ 1.09
PDZRN3-202ENST00000308537 C2orf16Q68DN1 1984 aa21.84■■□□□ 1.09
PDZRN3-202ENST00000308537 PHLPP2Q6ZVD8 1323 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 VPS37CA5D8V6 355 aaPredicted RBP21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 SFI1A8K8P3 1242 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 CNPP09543 421 aaKnown RBP21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 HOXB8P17481 243 aaPredicted RBP21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 LIG1P18858 919 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 PROZP22891 400 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 OR1G1P47890 313 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 GIT2Q14161 759 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 ATF7IP2Q5U623 682 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 KIAA0319Q5VV43 1072 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 FAM173BQ6P4H8 233 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 CABP7Q86V35 215 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 HACE1Q8IYU2 909 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 CEP120Q8N960 986 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 CASP10Q92851 521 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 KCNN1Q92952 543 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 ACO2Q99798 780 aaKnown RBP21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 C1QTNF1Q9BXJ1 281 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 GPR62Q9BZJ7 368 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 NT5C3AQ9H0P0 336 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 C17orf75Q9HAS0 396 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 MTMR6Q9Y217 621 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 TNFSF13BQ9Y275 285 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 CITO14578 2027 aa21.83■■□□□ 1.09
PDZRN3-202ENST00000308537 K7ELQ4 463 aaPredicted RBP21.82■■□□□ 1.08
PDZRN3-202ENST00000308537 K7ERI5 159 aa21.82■■□□□ 1.08
PDZRN3-202ENST00000308537 MEFVO15553 781 aaPredicted RBP21.82■■□□□ 1.08
PDZRN3-202ENST00000308537 SLC26A4O43511 780 aa21.82■■□□□ 1.08
PDZRN3-202ENST00000308537 PLA2G4BP0C869 781 aa21.82■■□□□ 1.08
PDZRN3-202ENST00000308537 ZRSR1Q15695 479 aaKnown RBP21.82■■□□□ 1.08
PDZRN3-202ENST00000308537 SPIRE2Q8WWL2 714 aa21.82■■□□□ 1.08
PDZRN3-202ENST00000308537 RABGGTAQ92696 567 aa21.82■■□□□ 1.08
PDZRN3-202ENST00000308537 DRC1Q96MC2 740 aa21.82■■□□□ 1.08
PDZRN3-202ENST00000308537 LRFN3Q9BTN0 628 aa21.82■■□□□ 1.08
PDZRN3-202ENST00000308537 TIPINQ9BVW5 301 aa21.82■■□□□ 1.08
PDZRN3-202ENST00000308537 APOL5Q9BWW9 433 aa21.82■■□□□ 1.08
PDZRN3-202ENST00000308537 PHF7Q9BWX1 381 aaPredicted RBP21.82■■□□□ 1.08
PDZRN3-202ENST00000308537 CDT1Q9H211 546 aa21.82■■□□□ 1.08
PDZRN3-202ENST00000308537 CLIC4Q9Y696 253 aa21.82■■□□□ 1.08
PDZRN3-202ENST00000308537 MYH15Q9Y2K3 1946 aa21.82■■□□□ 1.08
PDZRN3-202ENST00000308537 PDCD11Q14690 1871 aaKnown RBP21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 MTCL1Q9Y4B5 1905 aaKnown RBP21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 NPHP3-ACAD11A0A0J9YXS1 232 aa21.81■■□□□ 1.08
PDZRN3-202ENST00000308537 CCDC169A6NNP5 214 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms