RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 ITFG1Q8TB96 612 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 MBOAT7Q96N66 472 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 COLEC11Q9BWP8 271 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 GPR62Q9BZJ7 368 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 RWDD1Q9H446 243 aaPredicted RBP13.27□□□□□ -0.29
SMIM4-201ENST00000307106 IFT122Q9HBG6 1241 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 UBN1Q9NPG3 1134 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 FBXW11Q9UKB1 542 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 FRYQ5TBA9 3013 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 KIF26AQ9ULI4 1882 aaPredicted RBP13.27□□□□□ -0.29
SMIM4-201ENST00000307106 EML5Q05BV3 1969 aa13.27□□□□□ -0.29
SMIM4-201ENST00000307106 HNRNPA1P09651 372 aaKnown RBP eCLIP13.26□□□□□ -0.29
SMIM4-201ENST00000307106 ITGA4P13612 1032 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 GSPT1P15170 499 aaKnown RBP13.26□□□□□ -0.29
SMIM4-201ENST00000307106 CHMLP26374 656 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 MLH1P40692 756 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 JAK3P52333 1124 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 SHC2P98077 582 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 CREMQ03060 361 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 FUT2Q10981 343 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 PPP2R5DQ14738 602 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 XKR3Q5GH77 459 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 PPM1LQ5SGD2 360 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 N4BP2L1Q5TBK1 243 aaPredicted RBP13.26□□□□□ -0.29
SMIM4-201ENST00000307106 LIN9Q5TKA1 542 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 IL31Q6EBC2 164 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 SGMS1Q86VZ5 419 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 GPR65Q8IYL9 337 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 CNNM3Q8NE01 707 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 LENG9Q96B70 501 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 GAD1Q99259 594 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 UNC45AQ9H3U1 944 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 HEBP1Q9NRV9 189 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 POLIQ9UNA4 740 aa13.26□□□□□ -0.29
SMIM4-201ENST00000307106 ARL5CA6NH57 179 aa13.25□□□□□ -0.29
SMIM4-201ENST00000307106 ADAMTS3O15072 1205 aa13.25□□□□□ -0.29
SMIM4-201ENST00000307106 CCL16O15467 120 aa13.25□□□□□ -0.29
SMIM4-201ENST00000307106 SGSM2O43147 1006 aa13.25□□□□□ -0.29
SMIM4-201ENST00000307106 GAS7O60861 476 aa13.25□□□□□ -0.29
SMIM4-201ENST00000307106 MAFO75444 373 aaPredicted RBP13.25□□□□□ -0.29
SMIM4-201ENST00000307106 STBD1O95210 358 aa13.25□□□□□ -0.29
SMIM4-201ENST00000307106 C8AP07357 584 aa13.25□□□□□ -0.29
SMIM4-201ENST00000307106 HOXA11P31270 313 aaPredicted RBP13.25□□□□□ -0.29
SMIM4-201ENST00000307106 CIITAP33076 1130 aa13.25□□□□□ -0.29
SMIM4-201ENST00000307106 SCNN1GP51170 649 aa13.25□□□□□ -0.29
SMIM4-201ENST00000307106 SIM2Q14190 667 aaPredicted RBP13.25□□□□□ -0.29
SMIM4-201ENST00000307106 RTN1Q16799 776 aa13.25□□□□□ -0.29
SMIM4-201ENST00000307106 TTC22Q5TAA0 569 aa13.25□□□□□ -0.29
SMIM4-201ENST00000307106 APOA5Q6Q788 366 aa13.25□□□□□ -0.29
SMIM4-201ENST00000307106 REXO1Q8N1G1 1221 aaKnown RBP13.25□□□□□ -0.29
SMIM4-201ENST00000307106 SMG8Q8ND04 991 aaKnown RBP13.25□□□□□ -0.29
SMIM4-201ENST00000307106 EXOC6Q8TAG9 804 aa13.25□□□□□ -0.29
SMIM4-201ENST00000307106 ZFP42Q96MM3 310 aa13.25□□□□□ -0.29
SMIM4-201ENST00000307106 TEKT3Q9BXF9 490 aa13.25□□□□□ -0.29
SMIM4-201ENST00000307106 CHRDQ9H2X0 955 aa13.25□□□□□ -0.29
SMIM4-201ENST00000307106 MIOSQ9NXC5 875 aa13.25□□□□□ -0.29
SMIM4-201ENST00000307106 NDRG2Q9UN36 371 aaKnown RBP13.25□□□□□ -0.29
SMIM4-201ENST00000307106 IPPQ9Y573 584 aa13.25□□□□□ -0.29
SMIM4-201ENST00000307106 SHISA7A6NL88 538 aa13.24□□□□□ -0.29
SMIM4-201ENST00000307106 MSH4O15457 936 aa13.24□□□□□ -0.29
SMIM4-201ENST00000307106 FOXD2O60548 495 aaPredicted RBP13.24□□□□□ -0.29
SMIM4-201ENST00000307106 XYLBO75191 536 aa13.24□□□□□ -0.29
SMIM4-201ENST00000307106 IGHDP01880 384 aa13.24□□□□□ -0.29
SMIM4-201ENST00000307106 PROS1P07225 676 aa13.24□□□□□ -0.29
SMIM4-201ENST00000307106 HOXA9P31269 272 aa13.24□□□□□ -0.29
SMIM4-201ENST00000307106 CCR3P51677 355 aa13.24□□□□□ -0.29
SMIM4-201ENST00000307106 LRCH2Q5VUJ6 765 aa13.24□□□□□ -0.29
SMIM4-201ENST00000307106 PRSS55Q6UWB4 352 aaPredicted RBP13.24□□□□□ -0.29
SMIM4-201ENST00000307106 SRGAP1Q7Z6B7 1085 aa13.24□□□□□ -0.29
SMIM4-201ENST00000307106 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.24□□□□□ -0.29
SMIM4-201ENST00000307106 NPAS3Q8IXF0 933 aa13.24□□□□□ -0.29
SMIM4-201ENST00000307106 RIT2Q99578 217 aa13.24□□□□□ -0.29
SMIM4-201ENST00000307106 IER2Q9BTL4 223 aa13.24□□□□□ -0.29
SMIM4-201ENST00000307106 MINDY3Q9H8M7 445 aa13.24□□□□□ -0.29
SMIM4-201ENST00000307106 ADAM28Q9UKQ2 775 aa13.24□□□□□ -0.29
SMIM4-201ENST00000307106 COL4A3BPQ9Y5P4 624 aa13.24□□□□□ -0.29
SMIM4-201ENST00000307106 FASNP49327 2511 aaKnown RBP13.23□□□□□ -0.29
SMIM4-201ENST00000307106 ESYT2A0FGR8 921 aa13.23□□□□□ -0.29
SMIM4-201ENST00000307106 ECI2O75521 394 aa13.23□□□□□ -0.29
SMIM4-201ENST00000307106 RTP2Q5QGT7 225 aa13.23□□□□□ -0.29
SMIM4-201ENST00000307106 MAMSTRQ6ZN01 415 aa13.23□□□□□ -0.29
SMIM4-201ENST00000307106 MIER3Q7Z3K6 550 aa13.23□□□□□ -0.29
SMIM4-201ENST00000307106 ZNF687Q8N1G0 1237 aa13.23□□□□□ -0.29
SMIM4-201ENST00000307106 RDM1Q8NG50 284 aa13.23□□□□□ -0.29
SMIM4-201ENST00000307106 ING5Q8WYH8 240 aa13.23□□□□□ -0.29
SMIM4-201ENST00000307106 DNASE1L2Q92874 299 aa13.23□□□□□ -0.29
SMIM4-201ENST00000307106 SLC5A5Q92911 643 aa13.23□□□□□ -0.29
SMIM4-201ENST00000307106 GJA10Q969M2 543 aa13.23□□□□□ -0.29
SMIM4-201ENST00000307106 JPH2Q9BR39 696 aaPredicted RBP13.23□□□□□ -0.29
SMIM4-201ENST00000307106 EIF2AQ9BY44 585 aaKnown RBP13.23□□□□□ -0.29
SMIM4-201ENST00000307106 PLA2G2FQ9BZM2 168 aa13.23□□□□□ -0.29
SMIM4-201ENST00000307106 ZMYND12Q9H0C1 365 aa13.23□□□□□ -0.29
SMIM4-201ENST00000307106 RNF39Q9H2S5 420 aa13.23□□□□□ -0.29
SMIM4-201ENST00000307106 C6orf50Q9HD87 102 aa13.23□□□□□ -0.29
SMIM4-201ENST00000307106 HCFC1R1Q9NWW0 138 aa13.23□□□□□ -0.29
SMIM4-201ENST00000307106 HES2Q9Y543 173 aa13.23□□□□□ -0.29
SMIM4-201ENST00000307106 ATG2BQ96BY7 2078 aa13.22□□□□□ -0.29
SMIM4-201ENST00000307106 DDX11L8A8MPP1 907 aa13.22□□□□□ -0.29
SMIM4-201ENST00000307106 MAN2B1O00754 1011 aa13.22□□□□□ -0.29
SMIM4-201ENST00000307106 ZBTB43O43298 467 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms