RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 MLH1P40692 756 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 GTF2BQ00403 316 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 FAM160A1Q05DH4 1040 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 NOMO2Q5JPE7 1267 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 CLLU1OSQ5K130 101 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 EEF1DP3Q658K8 133 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 CNNM4Q6P4Q7 775 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 AGMOQ6ZNB7 445 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 KRBA2Q6ZNG9 492 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 MRPL10Q7Z7H8 261 aaKnown RBP12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ZBTB33Q86T24 672 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 MAP4K3Q8IVH8 894 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 TMEM192Q8IY95 271 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 GRAMD1CQ8IYS0 662 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 SMG8Q8ND04 991 aaKnown RBP12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 KCNN1Q92952 543 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 PAGE5Q96GU1 130 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 CASD1Q96PB1 797 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 GBP4Q96PP9 640 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 FAM193BQ96PV7 902 aaPredicted RBP12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ACCSQ96QU6 501 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 C17orf80Q9BSJ5 609 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 CCDC94Q9BW85 323 aaPredicted RBP12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 RNF19AQ9NV58 838 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 KANSL3Q9P2N6 904 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 HOOK1Q9UJC3 728 aaKnown RBP12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 PCDHB12Q9Y5F1 795 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ANK1P16157 1881 aa12.05□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 PVALEFA0A1B0GWK0 134 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 MEIS3P2A8K0S8 358 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 CLDN3O15551 220 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 GTPBP6O43824 516 aaPredicted RBP12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 KINO60870 393 aaKnown RBP12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ARHGEF15O94989 841 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 MCF2P10911 925 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 AKAP5P24588 427 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 CASP1P29466 404 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 YARSP54577 528 aaKnown RBP12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 CUL4BQ13620 913 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 EPC2Q52LR7 807 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ZC2HC1CQ53FD0 456 aaPredicted RBP12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 FAM26FQ5R3K3 315 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 L1TD1Q5T7N2 865 aaKnown RBP12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ZNF720Q7Z2F6 126 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 SYCP3Q8IZU3 236 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 TMEM87AQ8NBN3 555 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 GDPD5Q8WTR4 605 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 CLP1Q92989 425 aaKnown RBP12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 FIZ1Q96SL8 496 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 C11orf84Q9BUA3 381 aaPredicted RBP12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 PLVAPQ9BX97 442 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 CDT1Q9H211 546 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 PRDM12Q9H4Q4 367 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 TMEM206Q9H813 350 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 TOPORSQ9NS56 1045 aaPredicted RBP12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 MTMR10Q9NXD2 777 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 SNTG2Q9NY99 539 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 GDAQ9Y2T3 454 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 UBE4BO95155 1302 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 LAMA3Q16787 3333 aa12.04□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 EIF3DO15371 548 aaKnown RBP eCLIP12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ZC3H11AO75152 810 aaKnown RBP eCLIP12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 OFD1O75665 1012 aa12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 RECQL4O94761 1208 aa12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 PIGRP01833 764 aa12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 RB1P06400 928 aa12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 MYBP10242 640 aa12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 FOSL2P15408 326 aa12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 PROZP22891 400 aa12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 GRM5P41594 1212 aa12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 UBE2HP62256 183 aa12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 MCL1Q07820 350 aa12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 GRIN2CQ14957 1233 aa12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 KYAT1Q16773 422 aa12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 SLFN12LQ6IEE8 588 aa12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 THNSL1Q8IYQ7 743 aa12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 FMR1NBQ8N0W7 255 aaPredicted RBP12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 COLGALT1Q8NBJ5 622 aa12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ZNF558Q96NG5 402 aa12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 GAD1Q99259 594 aa12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 GBP3Q9H0R5 595 aa12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 TYW1Q9NV66 732 aaKnown RBP12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 TBC1D13Q9NVG8 400 aa12.03□□□□□ -0.48
CSPG4P1Y-201ENST00000306641 ARL5CA6NH57 179 aa12.02□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 C5orf67F2Z3F1 127 aa12.02□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 GOLGA6L22H0YM25 854 aa12.02□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 NR1I2O75469 434 aa12.02□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 PPP1R37O75864 691 aa12.02□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 POMCP01189 267 aa12.02□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 RPN1P04843 607 aaKnown RBP12.02□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 PRR29P0C7W0 189 aa12.02□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 IGFBP4P22692 258 aa12.02□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 PPM1AP35813 382 aa12.02□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 BMPR1AP36894 532 aa12.02□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 ALDH7A1P49419 539 aaKnown RBP12.02□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 SCNN1GP51170 649 aa12.02□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 CASP5P51878 434 aa12.02□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 OSTNP61366 133 aa12.02□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 GRIK3Q13003 919 aa12.02□□□□□ -0.49
CSPG4P1Y-201ENST00000306641 GPM6BQ13491 265 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms