RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 SLC1A1P43005 524 aa16.93■□□□□ 0.3
USP42-201ENST00000306177 ZNF280CQ8ND82 737 aa16.93■□□□□ 0.3
USP42-201ENST00000306177 TARSL2A2RTX5 802 aaKnown RBP16.93■□□□□ 0.3
USP42-201ENST00000306177 IQCA1LA6NCM1 817 aa16.93■□□□□ 0.3
USP42-201ENST00000306177 MYMKA6NI61 221 aa16.93■□□□□ 0.3
USP42-201ENST00000306177 IL1RL1Q01638 556 aa16.93■□□□□ 0.3
USP42-201ENST00000306177 USP49Q70CQ1 688 aa16.93■□□□□ 0.3
USP42-201ENST00000306177 SYT2Q8N9I0 419 aaPredicted RBP16.93■□□□□ 0.3
USP42-201ENST00000306177 A0A0G2JND7 137 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 SSU72P8A0A1W2PR75 194 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 MX2P20592 715 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 GYS2P54840 703 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 STK4Q13043 487 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 MFSD14CQ5VZR4 134 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 KPNA7A9QM74 516 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 DCCP43146 1447 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 PPP4CP60510 307 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 HDLBPQ00341 1268 aaKnown RBP16.92■□□□□ 0.3
USP42-201ENST00000306177 E2F5Q15329 346 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 EDRF1Q3B7T1 1238 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 HSP90AA5PQ58FG0 334 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 RASIP1Q5U651 963 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 SPATA4Q8NEY3 305 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 ACAP3Q96P50 834 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 FAM96AQ9H5X1 160 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 ELP3Q9H9T3 547 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 FAM8A1Q9UBU6 413 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 NCOA3Q9Y6Q9 1424 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 TMEM131LA2VDJ0 1609 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 LMBRD2Q68DH5 695 aaPredicted RBP16.92■□□□□ 0.3
USP42-201ENST00000306177 RNPC3Q96LT9 517 aaKnown RBP16.92■□□□□ 0.3
USP42-201ENST00000306177 WDR24Q96S15 920 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 JMJD4Q9H9V9 463 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 SUCLA2Q9P2R7 463 aaPredicted RBP16.92■□□□□ 0.3
USP42-201ENST00000306177 PPP2R2AP63151 447 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 OCRLQ01968 901 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 NR1I3Q14994 352 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 KIAA1755Q5JYT7 1200 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 EXT2Q93063 718 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 IFT43Q96FT9 208 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 TRAIPQ9BWF2 469 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 LMCD1Q9NZU5 365 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 ORC6Q9Y5N6 252 aa16.92■□□□□ 0.3
USP42-201ENST00000306177 CFLARO15519 480 aa16.91■□□□□ 0.3
USP42-201ENST00000306177 SCP2P22307 547 aa16.91■□□□□ 0.3
USP42-201ENST00000306177 GCKP35557 465 aa16.91■□□□□ 0.3
USP42-201ENST00000306177 FMO5P49326 533 aa16.91■□□□□ 0.3
USP42-201ENST00000306177 MXD4Q14582 209 aaPredicted RBP16.91■□□□□ 0.3
USP42-201ENST00000306177 TERF2Q15554 542 aa16.91■□□□□ 0.3
USP42-201ENST00000306177 ANGPTL2Q9UKU9 493 aa16.91■□□□□ 0.3
USP42-201ENST00000306177 HPCAL4Q9UM19 191 aa16.91■□□□□ 0.3
USP42-201ENST00000306177 SNX12Q9UMY4 172 aa16.91■□□□□ 0.3
USP42-201ENST00000306177 NR3C2P08235 984 aa16.91■□□□□ 0.3
USP42-201ENST00000306177 ZFXP17010 805 aaPredicted RBP16.91■□□□□ 0.3
USP42-201ENST00000306177 ITPRIPL1Q6GPH6 555 aa16.91■□□□□ 0.3
USP42-201ENST00000306177 RUBCNQ92622 972 aa16.91■□□□□ 0.3
USP42-201ENST00000306177 MAGEB5Q9BZ81 275 aa16.91■□□□□ 0.3
USP42-201ENST00000306177 YWHAHQ04917 246 aaPredicted RBP16.91■□□□□ 0.3
USP42-201ENST00000306177 PDIA2Q13087 525 aaKnown RBP16.91■□□□□ 0.3
USP42-201ENST00000306177 TEX2Q8IWB9 1127 aa16.91■□□□□ 0.3
USP42-201ENST00000306177 DHX35Q9H5Z1 703 aaKnown RBP16.91■□□□□ 0.3
USP42-201ENST00000306177 MROH2AA6NES4 1674 aa16.91■□□□□ 0.3
USP42-201ENST00000306177 KCTD17Q8N5Z5 321 aa16.91■□□□□ 0.3
USP42-201ENST00000306177 CHP1Q99653 195 aa16.91■□□□□ 0.3
USP42-201ENST00000306177 SPON1Q9HCB6 807 aa16.91■□□□□ 0.3
USP42-201ENST00000306177 H3BRJ5 948 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 TROAPQ12815 778 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 FAM47EQ6ZV65 393 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 ZBED8Q8IZ13 594 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 PPM1NQ8N819 430 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 ATP11CQ8NB49 1132 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 C1orf54Q8WWF1 131 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 TNIP3Q96KP6 325 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 FGD4Q96M96 766 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 UCHL3P15374 230 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 CDH6P55285 790 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 CCZ1BP86790 482 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 CCZ1P86791 482 aaPredicted RBP16.9■□□□□ 0.3
USP42-201ENST00000306177 RASGRP2Q7LDG7 609 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 ZBED2Q9BTP6 218 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 TRIM62Q9BVG3 475 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 VPS11Q9H270 941 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 THEGQ9P2T0 379 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 PPARGC1AQ9UBK2 798 aaKnown RBP16.9■□□□□ 0.3
USP42-201ENST00000306177 APOBEC2Q9Y235 224 aaKnown RBP16.9■□□□□ 0.3
USP42-201ENST00000306177 HOXD10P28358 340 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 CDC42EP1Q00587 391 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 R3HDM1Q15032 1099 aaKnown RBP16.9■□□□□ 0.3
USP42-201ENST00000306177 WDR72Q3MJ13 1102 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 ANGEL2Q5VTE6 544 aaKnown RBP16.9■□□□□ 0.3
USP42-201ENST00000306177 IZUMO3Q5VZ72 239 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 TMEM60Q9H2L4 133 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 UVRAGQ9P2Y5 699 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 ASAP2O43150 1006 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 GUCY2CP25092 1073 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 RECQLP46063 649 aaPredicted RBP16.9■□□□□ 0.3
USP42-201ENST00000306177 FXR2P51116 673 aaKnown RBP eCLIP16.9■□□□□ 0.3
USP42-201ENST00000306177 COPS2P61201 443 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 NME3Q13232 169 aa16.9■□□□□ 0.3
USP42-201ENST00000306177 SPDYE1Q8NFV5 336 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms