RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 TTC13Q8NBP0 860 aa17.73■□□□□ 0.43
PDS5A-201ENST00000303538 JPH1Q9HDC5 661 aaPredicted RBP17.73■□□□□ 0.43
PDS5A-201ENST00000303538 AGAP1Q9UPQ3 857 aa17.73■□□□□ 0.43
PDS5A-201ENST00000303538 TLR2O60603 784 aa17.73■□□□□ 0.43
PDS5A-201ENST00000303538 TWF1Q12792 350 aa17.73■□□□□ 0.43
PDS5A-201ENST00000303538 TMED1Q13445 227 aa17.73■□□□□ 0.43
PDS5A-201ENST00000303538 ELAC2Q9BQ52 826 aaKnown RBP17.73■□□□□ 0.43
PDS5A-201ENST00000303538 MROH7-TTC4A0A0A0MT08 1334 aa17.73■□□□□ 0.43
PDS5A-201ENST00000303538 GFAPP14136 432 aa17.73■□□□□ 0.43
PDS5A-201ENST00000303538 KIZQ2M2Z5 673 aa17.73■□□□□ 0.43
PDS5A-201ENST00000303538 RAD54LQ92698 747 aa17.73■□□□□ 0.43
PDS5A-201ENST00000303538 EIF2AK1Q9BQI3 630 aaKnown RBP17.73■□□□□ 0.43
PDS5A-201ENST00000303538 RPS6KA5O75582 802 aa17.73■□□□□ 0.43
PDS5A-201ENST00000303538 HSD17B4P51659 736 aa17.73■□□□□ 0.43
PDS5A-201ENST00000303538 PABPC5Q96DU9 382 aaKnown RBP17.73■□□□□ 0.43
PDS5A-201ENST00000303538 BRIP1Q9BX63 1249 aa17.73■□□□□ 0.43
PDS5A-201ENST00000303538 UNC45AQ9H3U1 944 aa17.73■□□□□ 0.43
PDS5A-201ENST00000303538 NLRP1Q9C000 1473 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 SNAPC2Q13487 334 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 SPARCL1Q14515 664 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 C6orf118Q5T5N4 469 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 ITPRIPL1Q6GPH6 555 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 LDHDQ86WU2 507 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 APPL2Q8NEU8 664 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 TDRD7Q8NHU6 1098 aaKnown RBP17.72■□□□□ 0.43
PDS5A-201ENST00000303538 RABGGTAQ92696 567 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 TNIP3Q96KP6 325 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 DCTN4Q9UJW0 460 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 NPM3O75607 178 aaKnown RBP17.72■□□□□ 0.43
PDS5A-201ENST00000303538 PRKCBP05771 671 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 OTUB1Q96FW1 271 aaPredicted RBP17.72■□□□□ 0.43
PDS5A-201ENST00000303538 FOPNLQ96NB1 174 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 EFCAB14O75071 495 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 SREBF2Q12772 1141 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 FAM180AQ6UWF9 173 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 RNF168Q8IYW5 571 aaPredicted RBP17.72■□□□□ 0.43
PDS5A-201ENST00000303538 SH3GLB2Q9NR46 395 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 TMEM161AQ9NX61 479 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 GGA3Q9NZ52 723 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 FTLP02792 175 aaPredicted RBP17.72■□□□□ 0.43
PDS5A-201ENST00000303538 WDR72Q3MJ13 1102 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 FAM135BQ49AJ0 1406 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 PHLPP2Q6ZVD8 1323 aa17.72■□□□□ 0.43
PDS5A-201ENST00000303538 CCL15-CCL14A0A0B4J2E2 113 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 RNF103-CHMP3A0A140T963 221 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 CCL15Q16663 113 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 EPM2AIP1Q7L775 607 aaPredicted RBP17.71■□□□□ 0.43
PDS5A-201ENST00000303538 ANGPTL2Q9UKU9 493 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 PCDHB8Q9UN66 801 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 MAFGO15525 162 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 TRIM49P0CI25 452 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 TRIM49CP0CI26 452 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 MCF2P10911 925 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 CYB5R4Q7L1T6 521 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 NUDCD3Q8IVD9 361 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 GPD1LQ8N335 351 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 GGPS1O95749 300 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 SOX11P35716 441 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 HIF1AQ16665 826 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 FSCBQ5H9T9 825 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 TBC1D1Q86TI0 1168 aaPredicted RBP17.71■□□□□ 0.43
PDS5A-201ENST00000303538 BFARQ9NZS9 450 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.71■□□□□ 0.43
PDS5A-201ENST00000303538 HMOX2P30519 316 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 KNOP1Q1ED39 458 aaKnown RBP17.71■□□□□ 0.43
PDS5A-201ENST00000303538 ATP11CQ8NB49 1132 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 SH3TC2Q8TF17 1288 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 CYP4F11Q9HBI6 524 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 IP6K2Q9UHH9 426 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 ACOT2P49753 483 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 UBE3AQ05086 875 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 DRAP1Q14919 205 aaPredicted RBP17.71■□□□□ 0.43
PDS5A-201ENST00000303538 IER5Q5VY09 327 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 SMAP1Q8IYB5 467 aaPredicted RBP17.71■□□□□ 0.43
PDS5A-201ENST00000303538 LATS2Q9NRM7 1088 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 PEG3Q9GZU2 1588 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 MAP3K13O43283 966 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 HIST1H2AGP0C0S8 130 aaPredicted RBP17.71■□□□□ 0.43
PDS5A-201ENST00000303538 HIST1H2ADP20671 130 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 YWHABP31946 246 aaKnown RBP17.71■□□□□ 0.43
PDS5A-201ENST00000303538 CSE1LP55060 971 aaKnown RBP17.71■□□□□ 0.43
PDS5A-201ENST00000303538 SESN2P58004 480 aaPredicted RBP17.71■□□□□ 0.43
PDS5A-201ENST00000303538 ARL6IP4Q66PJ3 421 aaKnown RBP17.71■□□□□ 0.43
PDS5A-201ENST00000303538 RGS9BPQ6ZS82 235 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 C11orf74Q86VG3 221 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 HIST1H2AHQ96KK5 128 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 HIST1H2AJQ99878 128 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 H2AFJQ9BTM1 129 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 TUBB6Q9BUF5 446 aa17.71■□□□□ 0.43
PDS5A-201ENST00000303538 ALDH1A3P47895 512 aa17.7■□□□□ 0.42
PDS5A-201ENST00000303538 MDM2Q00987 491 aaPredicted RBP17.7■□□□□ 0.42
PDS5A-201ENST00000303538 NBPF20Q3BBV1 942 aa17.7■□□□□ 0.42
PDS5A-201ENST00000303538 NBPF10Q6P3W6 841 aaKnown RBP17.7■□□□□ 0.42
PDS5A-201ENST00000303538 TBC1D10CQ8IV04 446 aa17.7■□□□□ 0.42
PDS5A-201ENST00000303538 FAM20AQ96MK3 541 aa17.7■□□□□ 0.42
PDS5A-201ENST00000303538 PCDHA10Q9Y5I2 948 aa17.7■□□□□ 0.42
PDS5A-201ENST00000303538 KRT87PA6NCN2 255 aa17.7■□□□□ 0.42
PDS5A-201ENST00000303538 H0Y3Z8 333 aa17.7■□□□□ 0.42
PDS5A-201ENST00000303538 GYG2O15488 501 aa17.7■□□□□ 0.42
PDS5A-201ENST00000303538 TADA3O75528 432 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms