RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 COG7P83436 770 aa20.54■□□□□ 0.88
TSR1-201ENST00000301364 THOC5Q13769 683 aaKnown RBP20.54■□□□□ 0.88
TSR1-201ENST00000301364 RSRC2Q7L4I2 434 aaKnown RBP20.54■□□□□ 0.88
TSR1-201ENST00000301364 P4HA2O15460 535 aa20.54■□□□□ 0.88
TSR1-201ENST00000301364 OATP04181 439 aa20.54■□□□□ 0.88
TSR1-201ENST00000301364 SARSP49591 514 aaKnown RBP20.54■□□□□ 0.88
TSR1-201ENST00000301364 GPC3P51654 580 aa20.54■□□□□ 0.88
TSR1-201ENST00000301364 SLC9A2Q9UBY0 812 aa20.54■□□□□ 0.88
TSR1-201ENST00000301364 ARL2BPQ9Y2Y0 163 aa20.54■□□□□ 0.88
TSR1-201ENST00000301364 SPATA31D1Q6ZQQ2 1576 aa20.54■□□□□ 0.88
TSR1-201ENST00000301364 MDM2Q00987 491 aaPredicted RBP20.54■□□□□ 0.88
TSR1-201ENST00000301364 NBPF3Q9H094 633 aa20.54■□□□□ 0.88
TSR1-201ENST00000301364 GOLGA8MH3BSY2 632 aa20.53■□□□□ 0.88
TSR1-201ENST00000301364 MARK3P27448 753 aa20.53■□□□□ 0.88
TSR1-201ENST00000301364 PSMC1P62191 440 aaKnown RBP20.53■□□□□ 0.88
TSR1-201ENST00000301364 SPOPLQ6IQ16 392 aa20.53■□□□□ 0.88
TSR1-201ENST00000301364 XPO6Q96QU8 1125 aaKnown RBP20.53■□□□□ 0.88
TSR1-201ENST00000301364 ERP44Q9BS26 406 aa20.53■□□□□ 0.88
TSR1-201ENST00000301364 APOBEC2Q9Y235 224 aaKnown RBP20.53■□□□□ 0.88
TSR1-201ENST00000301364 ZWINTO95229 277 aa20.53■□□□□ 0.88
TSR1-201ENST00000301364 ARFIP2P53365 341 aa20.53■□□□□ 0.88
TSR1-201ENST00000301364 ACTN3Q08043 901 aaPredicted RBP20.53■□□□□ 0.88
TSR1-201ENST00000301364 ARL13BQ3SXY8 428 aa20.53■□□□□ 0.88
TSR1-201ENST00000301364 ZNF568Q3ZCX4 644 aa20.53■□□□□ 0.88
TSR1-201ENST00000301364 SPATA21Q7Z572 469 aa20.53■□□□□ 0.88
TSR1-201ENST00000301364 METTL23Q86XA0 190 aa20.53■□□□□ 0.88
TSR1-201ENST00000301364 JAMLQ86YT9 394 aa20.53■□□□□ 0.88
TSR1-201ENST00000301364 SDCCAG3Q96C92 435 aa20.53■□□□□ 0.88
TSR1-201ENST00000301364 TRIM66O15016 1216 aa20.53■□□□□ 0.88
TSR1-201ENST00000301364 FOXP3Q9BZS1 431 aa20.53■□□□□ 0.88
TSR1-201ENST00000301364 CHN1P15882 459 aa20.53■□□□□ 0.88
TSR1-201ENST00000301364 GRB10Q13322 594 aa20.53■□□□□ 0.88
TSR1-201ENST00000301364 ART3Q13508 389 aa20.53■□□□□ 0.88
TSR1-201ENST00000301364 MRPL4Q9BYD3 311 aaKnown RBP20.53■□□□□ 0.88
TSR1-201ENST00000301364 ROPN1BQ9BZX4 212 aaPredicted RBP20.53■□□□□ 0.88
TSR1-201ENST00000301364 ROPN1Q9HAT0 212 aaPredicted RBP20.53■□□□□ 0.88
TSR1-201ENST00000301364 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.53■□□□□ 0.88
TSR1-201ENST00000301364 SNRPFP62306 86 aaKnown RBP20.52■□□□□ 0.88
TSR1-201ENST00000301364 STRIP1Q5VSL9 837 aa20.52■□□□□ 0.88
TSR1-201ENST00000301364 RSPH3Q86UC2 560 aa20.52■□□□□ 0.88
TSR1-201ENST00000301364 PPWD1Q96BP3 646 aaKnown RBP20.52■□□□□ 0.88
TSR1-201ENST00000301364 NUDCD1Q96RS6 583 aa20.52■□□□□ 0.88
TSR1-201ENST00000301364 TRIM56Q9BRZ2 755 aaKnown RBP20.52■□□□□ 0.88
TSR1-201ENST00000301364 CARD9Q9H257 536 aa20.52■□□□□ 0.88
TSR1-201ENST00000301364 KCND1Q9NSA2 647 aa20.52■□□□□ 0.88
TSR1-201ENST00000301364 TFR2Q9UP52 801 aa20.52■□□□□ 0.88
TSR1-201ENST00000301364 FAM107AO95990 144 aa20.52■□□□□ 0.88
TSR1-201ENST00000301364 ILDR1Q86SU0 546 aaPredicted RBP20.52■□□□□ 0.88
TSR1-201ENST00000301364 OR6B3Q8NGW1 331 aa20.52■□□□□ 0.88
TSR1-201ENST00000301364 SMG5Q9UPR3 1016 aaKnown RBP20.52■□□□□ 0.88
TSR1-201ENST00000301364 PRR5LQ6MZQ0 368 aa20.52■□□□□ 0.88
TSR1-201ENST00000301364 ENTPD3O75355 529 aa20.52■□□□□ 0.87
TSR1-201ENST00000301364 PLEKP08567 350 aaPredicted RBP20.52■□□□□ 0.87
TSR1-201ENST00000301364 SDC4P31431 198 aa20.52■□□□□ 0.87
TSR1-201ENST00000301364 PHKA2P46019 1235 aa20.52■□□□□ 0.87
TSR1-201ENST00000301364 CDR2Q01850 454 aa20.52■□□□□ 0.87
TSR1-201ENST00000301364 EAPPQ56P03 285 aaPredicted RBP20.52■□□□□ 0.87
TSR1-201ENST00000301364 CLEC10AQ8IUN9 316 aa20.52■□□□□ 0.87
TSR1-201ENST00000301364 ARSEP51690 589 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 CENPPQ6IPU0 288 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 H0Y3Z8 333 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 SPAG7O75391 227 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 DGAT1O75907 488 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 POLR3CQ9BUI4 534 aaPredicted RBP20.51■□□□□ 0.87
TSR1-201ENST00000301364 HEY1Q9Y5J3 304 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 ALG6Q9Y672 507 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 AK9Q5TCS8 1911 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 ARHGEF37A1IGU5 675 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 TCP11X1B4DZS4 312 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 HSPA4LO95757 839 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 ITPK1Q13572 414 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 DUOXA2Q1HG44 320 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 FSCBQ5H9T9 825 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 TRIM65Q6PJ69 517 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 RCOR2Q8IZ40 523 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 PRMT1Q99873 361 aaKnown RBP20.51■□□□□ 0.87
TSR1-201ENST00000301364 PPCSQ9HAB8 311 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 CORO7P57737 925 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 PKN1Q16512 942 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 CDC42EP5Q6NZY7 148 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 PPM1NQ8N819 430 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 FAM129AQ9BZQ8 928 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 PCSK1NQ9UHG2 260 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 DCTN4Q9UJW0 460 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 NAGPAQ9UK23 515 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 ZHX2Q9Y6X8 837 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 NWD1Q149M9 1564 aa20.51■□□□□ 0.87
TSR1-201ENST00000301364 LPXNO60711 386 aa20.5■□□□□ 0.87
TSR1-201ENST00000301364 SGSM3Q96HU1 749 aa20.5■□□□□ 0.87
TSR1-201ENST00000301364 FAM193BQ96PV7 902 aaPredicted RBP20.5■□□□□ 0.87
TSR1-201ENST00000301364 RIT2Q99578 217 aa20.5■□□□□ 0.87
TSR1-201ENST00000301364 TCRBV5S4A2TA0A5A2 114 aa20.5■□□□□ 0.87
TSR1-201ENST00000301364 ABL1P00519 1130 aa20.5■□□□□ 0.87
TSR1-201ENST00000301364 TBX2Q13207 712 aaPredicted RBP20.5■□□□□ 0.87
TSR1-201ENST00000301364 TAF1BQ53T94 588 aaPredicted RBP20.5■□□□□ 0.87
TSR1-201ENST00000301364 MCUQ8NE86 351 aa20.5■□□□□ 0.87
TSR1-201ENST00000301364 DDX27Q96GQ7 796 aaKnown RBP20.5■□□□□ 0.87
TSR1-201ENST00000301364 PRR12Q9ULL5 1215 aa20.5■□□□□ 0.87
TSR1-201ENST00000301364 MX2P20592 715 aa20.5■□□□□ 0.87
TSR1-201ENST00000301364 SEC16BQ96JE7 1060 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms