RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 CYP24A1Q07973 514 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 GPD1LQ8N335 351 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 FNBP1Q96RU3 617 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 SENP7Q9BQF6 1050 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 EPB41L5Q9HCM4 733 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 RBPJLQ9UBG7 517 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 COG5Q9UP83 839 aa15.74■□□□□ 0.11
SMG8-201ENST00000300917 DKC1O60832 514 aaKnown RBP eCLIP15.73■□□□□ 0.11
SMG8-201ENST00000300917 ITGA4P13612 1032 aa15.73■□□□□ 0.11
SMG8-201ENST00000300917 GUCY2FP51841 1108 aa15.73■□□□□ 0.11
SMG8-201ENST00000300917 WDR93Q6P2C0 686 aa15.73■□□□□ 0.11
SMG8-201ENST00000300917 CCNI2Q6ZMN8 369 aaPredicted RBP15.73■□□□□ 0.11
SMG8-201ENST00000300917 LRRC57Q8N9N7 239 aa15.73■□□□□ 0.11
SMG8-201ENST00000300917 SELENOOQ9BVL4 669 aa15.73■□□□□ 0.11
SMG8-201ENST00000300917 HAPLN2Q9GZV7 340 aa15.73■□□□□ 0.11
SMG8-201ENST00000300917 DDX47Q9H0S4 455 aaKnown RBP15.73■□□□□ 0.11
SMG8-201ENST00000300917 PORCNQ9H237 461 aa15.73■□□□□ 0.11
SMG8-201ENST00000300917 RAB20Q9NX57 234 aa15.73■□□□□ 0.11
SMG8-201ENST00000300917 MAP2K7O14733 419 aa15.73■□□□□ 0.11
SMG8-201ENST00000300917 HEXIM1O94992 359 aaKnown RBP15.73■□□□□ 0.11
SMG8-201ENST00000300917 TERF2Q15554 542 aa15.73■□□□□ 0.11
SMG8-201ENST00000300917 DPY19L2Q6NUT2 758 aa15.73■□□□□ 0.11
SMG8-201ENST00000300917 FBXL13Q8NEE6 735 aa15.73■□□□□ 0.11
SMG8-201ENST00000300917 DNERQ8NFT8 737 aa15.73■□□□□ 0.11
SMG8-201ENST00000300917 HNRNPLLQ8WVV9 542 aaKnown RBP15.73■□□□□ 0.11
SMG8-201ENST00000300917 NFASCO94856 1347 aa15.73■□□□□ 0.11
SMG8-201ENST00000300917 PRLRP16471 622 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 MKRN4PQ13434 485 aaPredicted RBP15.72■□□□□ 0.11
SMG8-201ENST00000300917 KCTD2Q14681 263 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 MESDQ14696 234 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 MAP1SQ66K74 1059 aaPredicted RBP15.72■□□□□ 0.11
SMG8-201ENST00000300917 LLGL2Q6P1M3 1020 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 ZNF516Q92618 1163 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 TIPINQ9BVW5 301 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 ST6GALNAC4Q9H4F1 302 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 PDLIM7Q9NR12 457 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 AGO2Q9UKV8 859 aaKnown RBP15.72■□□□□ 0.11
SMG8-201ENST00000300917 FAN1Q9Y2M0 1017 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 PTPRJQ12913 1337 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 CEP350Q5VT06 3117 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 A0A0G2JLL6 359 aaPredicted RBP15.72■□□□□ 0.11
SMG8-201ENST00000300917 ZNF233A6NK53 670 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 CNMDO75829 334 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 CARSP49589 748 aaKnown RBP15.72■□□□□ 0.11
SMG8-201ENST00000300917 TMEM132AQ24JP5 1023 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 PRRT2Q7Z6L0 340 aaPredicted RBP15.72■□□□□ 0.11
SMG8-201ENST00000300917 TMEM130Q8N3G9 435 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 PRPF31Q8WWY3 499 aaKnown RBP15.72■□□□□ 0.11
SMG8-201ENST00000300917 NT5C1BQ96P26 610 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 AZI2Q9H6S1 392 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 NFU1Q9UMS0 254 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 MYBPC2Q14324 1141 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 C10orf76Q5T2E6 689 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 DDX42Q86XP3 938 aaKnown RBP eCLIP15.72■□□□□ 0.11
SMG8-201ENST00000300917 C12orf56Q8IXR9 622 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 MMGT1Q8N4V1 131 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 SPIRE2Q8WWL2 714 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 BBXQ8WY36 941 aaPredicted RBP15.72■□□□□ 0.11
SMG8-201ENST00000300917 TRIM31Q9BZY9 425 aa15.72■□□□□ 0.11
SMG8-201ENST00000300917 MAFBQ9Y5Q3 323 aaPredicted RBP15.72■□□□□ 0.11
SMG8-201ENST00000300917 CCDC172P0C7W6 258 aa15.71■□□□□ 0.11
SMG8-201ENST00000300917 PPATQ06203 517 aa15.71■□□□□ 0.11
SMG8-201ENST00000300917 IFI16Q16666 785 aaKnown RBP15.71■□□□□ 0.11
SMG8-201ENST00000300917 PASD1Q8IV76 773 aa15.71■□□□□ 0.11
SMG8-201ENST00000300917 HOMEZQ8IX15 550 aa15.71■□□□□ 0.11
SMG8-201ENST00000300917 EPS8L1Q8TE68 723 aa15.71■□□□□ 0.11
SMG8-201ENST00000300917 MMP19Q99542 508 aa15.71■□□□□ 0.11
SMG8-201ENST00000300917 MSTO1Q9BUK6 570 aa15.71■□□□□ 0.11
SMG8-201ENST00000300917 TMEM8AQ9HCN3 771 aa15.71■□□□□ 0.11
SMG8-201ENST00000300917 STIM2Q9P246 746 aa15.71■□□□□ 0.11
SMG8-201ENST00000300917 ARHGAP28Q9P2N2 729 aa15.71■□□□□ 0.11
SMG8-201ENST00000300917 TSKSQ9UJT2 592 aa15.71■□□□□ 0.11
SMG8-201ENST00000300917 TUBB4BP68371 445 aa15.71■□□□□ 0.11
SMG8-201ENST00000300917 NLRP4Q96MN2 994 aa15.71■□□□□ 0.11
SMG8-201ENST00000300917 NTPCRQ9BSD7 190 aaKnown RBP15.71■□□□□ 0.11
SMG8-201ENST00000300917 AMFRQ9UKV5 643 aa15.71■□□□□ 0.11
SMG8-201ENST00000300917 TRPC6Q9Y210 931 aa15.71■□□□□ 0.11
SMG8-201ENST00000300917 RAD51CO43502 376 aa15.7■□□□□ 0.1
SMG8-201ENST00000300917 GJA5P36382 358 aa15.7■□□□□ 0.1
SMG8-201ENST00000300917 TNFSF9P41273 254 aa15.7■□□□□ 0.1
SMG8-201ENST00000300917 MARCKSL1P49006 195 aa15.7■□□□□ 0.1
SMG8-201ENST00000300917 MFAP3P55082 362 aa15.7■□□□□ 0.1
SMG8-201ENST00000300917 CAPSQ13938 189 aa15.7■□□□□ 0.1
SMG8-201ENST00000300917 KIF22Q14807 665 aa15.7■□□□□ 0.1
SMG8-201ENST00000300917 BRDTQ58F21 947 aaPredicted RBP15.7■□□□□ 0.1
SMG8-201ENST00000300917 NT5DC3Q86UY8 548 aa15.7■□□□□ 0.1
SMG8-201ENST00000300917 RFFLQ8WZ73 363 aa15.7■□□□□ 0.1
SMG8-201ENST00000300917 SPATA33Q96N06 139 aa15.7■□□□□ 0.1
SMG8-201ENST00000300917 NOC2LQ9Y3T9 749 aaKnown RBP15.7■□□□□ 0.1
SMG8-201ENST00000300917 NR2E1Q9Y466 385 aa15.7■□□□□ 0.1
SMG8-201ENST00000300917 CHRNB2P17787 502 aa15.7■□□□□ 0.1
SMG8-201ENST00000300917 HSP90B2PQ58FF3 399 aa15.7■□□□□ 0.1
SMG8-201ENST00000300917 USP38Q8NB14 1042 aa15.7■□□□□ 0.1
SMG8-201ENST00000300917 HELQQ8TDG4 1101 aa15.7■□□□□ 0.1
SMG8-201ENST00000300917 SEPT1Q8WYJ6 367 aa15.7■□□□□ 0.1
SMG8-201ENST00000300917 SYT11Q9BT88 431 aa15.7■□□□□ 0.1
SMG8-201ENST00000300917 RBAKQ9NYW8 714 aaPredicted RBP15.7■□□□□ 0.1
SMG8-201ENST00000300917 NENFQ9UMX5 172 aa15.7■□□□□ 0.1
SMG8-201ENST00000300917 MYPNQ86TC9 1320 aa15.7■□□□□ 0.1
SMG8-201ENST00000300917 KRIT1O00522 736 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms