RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 OSBP2Q969R2 916 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 WNT8AQ9H1J5 351 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 GREM2Q9H772 168 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 CAAP1Q9H8G2 361 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 BTG4Q9NY30 223 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 SEL1LQ9UBV2 794 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 SNX12Q9UMY4 172 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 MAGEA13PA6NCF6 341 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 ADD2P35612 726 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 PLOD1Q02809 727 aaPredicted RBP15.7■□□□□ 0.1
SCN3B-201ENST00000299333 PTK2BQ14289 1009 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 KRT33BQ14525 404 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 TMEM270Q6UE05 265 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 CCNI2Q6ZMN8 369 aaPredicted RBP15.7■□□□□ 0.1
SCN3B-201ENST00000299333 ARMCX2Q7L311 632 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 APLFQ8IW19 511 aaPredicted RBP15.7■□□□□ 0.1
SCN3B-201ENST00000299333 RNPC3Q96LT9 517 aaKnown RBP15.7■□□□□ 0.1
SCN3B-201ENST00000299333 MTA3Q9BTC8 594 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 BBS2Q9BXC9 721 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 SENP1Q9P0U3 644 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 AIM2O14862 343 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 ASAP2O43150 1006 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 PEX3P56589 373 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 NECTIN1Q15223 517 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 CC2D2BQ6DHV5 1058 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 LCORLQ8N3X6 602 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 TMEM35BQ8NCS4 154 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 EGFL8Q99944 293 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 TMEM245Q9H330 911 aa15.7■□□□□ 0.1
SCN3B-201ENST00000299333 SMG5Q9UPR3 1016 aaKnown RBP15.7■□□□□ 0.1
SCN3B-201ENST00000299333 SPATA31E1Q6ZUB1 1445 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 RSPH10B2B2RC85 870 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 H0YIN7 160 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 PDE8BO95263 885 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 RSPH10BP0C881 870 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 SRGAP2CP0DJJ0 459 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 STX3Q13277 289 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 NAALADL2Q58DX5 795 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 ETAA1Q9NY74 926 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 MYO1GB0I1T2 1018 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 TSC22D2O75157 780 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 KRT72Q14CN4 511 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 Q3C1V9 767 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 E4F1Q66K89 784 aaPredicted RBP15.69■□□□□ 0.1
SCN3B-201ENST00000299333 HEATR6Q6AI08 1181 aaKnown RBP15.69■□□□□ 0.1
SCN3B-201ENST00000299333 KIRREL3Q8IZU9 778 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 OR6B3Q8NGW1 331 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 GINS4Q9BRT9 223 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 KLHL31Q9H511 634 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 RPF1Q9H9Y2 349 aaKnown RBP15.69■□□□□ 0.1
SCN3B-201ENST00000299333 PSD3Q9NYI0 1048 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 hCG_1984214I3L0E3 225 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 LUZP2Q86TE4 346 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 MICU2Q8IYU8 434 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 ZNF713Q8N859 430 aaPredicted RBP15.69■□□□□ 0.1
SCN3B-201ENST00000299333 IFT43Q96FT9 208 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 MRPL1Q9BYD6 325 aaKnown RBP15.69■□□□□ 0.1
SCN3B-201ENST00000299333 PLEKHA8P1O95397 391 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 DRAP1Q14919 205 aaPredicted RBP15.69■□□□□ 0.1
SCN3B-201ENST00000299333 IFNEQ86WN2 208 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 PIGOQ8TEQ8 1089 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 USP33Q8TEY7 942 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 PHF21AQ96BD5 680 aa15.69■□□□□ 0.1
SCN3B-201ENST00000299333 EML4Q9HC35 981 aaKnown RBP15.69■□□□□ 0.1
SCN3B-201ENST00000299333 DOK7Q18PE1 504 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 ZCWPW2Q504Y3 356 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 KIAA1755Q5JYT7 1200 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 SFR1Q86XK3 245 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 TRMT2AQ8IZ69 625 aaKnown RBP15.68■□□□□ 0.1
SCN3B-201ENST00000299333 PROM2Q8N271 834 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 PDCD6IPQ8WUM4 868 aaKnown RBP15.68■□□□□ 0.1
SCN3B-201ENST00000299333 PPP1R14BQ96C90 147 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 UBN2Q6ZU65 1347 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 E5RI56 91 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 CALB1P05937 261 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 CPA2P48052 419 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 ALCAMQ13740 583 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 SYCP2LQ5T4T6 812 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 C16orf89Q6UX73 402 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 GADL1Q6ZQY3 521 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 CCDC149Q6ZUS6 474 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 ATP6V0A4Q9HBG4 840 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 PI16Q6UXB8 463 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 TMC4Q7Z404 712 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 ZNF212Q9UDV6 495 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 PPIP5K2O43314 1243 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 GNAT1P11488 350 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 ABCD1P33897 745 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 GRIN1Q05586 938 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 ANO4Q32M45 955 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 POTEAQ6S8J7 498 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 GLYCTKQ8IVS8 523 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 GGPS1O95749 300 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 ZCCHC18P0CG32 403 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 ACADSP16219 412 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 DSG1Q02413 1049 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 C1orf228Q6PIY5 440 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 DPF2Q92785 391 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 CLMNQ96JQ2 1002 aa15.68■□□□□ 0.1
SCN3B-201ENST00000299333 ZIM3Q96PE6 472 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms