RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 RPS6KC1Q96S38 1066 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 ZCWPW1Q9H0M4 648 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRUB1-201ENST00000298746 NAALADL1Q9UQQ1 740 aa12.2□□□□□ -0.46
TRUB1-201ENST00000298746 A0A0G2JND7 137 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 CDH16O75309 829 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 SLC12A3P55017 1021 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 UBXN2AP68543 259 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 MRPS35P82673 323 aaKnown RBP12.19□□□□□ -0.46
TRUB1-201ENST00000298746 MKRN3Q13064 507 aaKnown RBP12.19□□□□□ -0.46
TRUB1-201ENST00000298746 EGFL6Q8IUX8 553 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 TTC8Q8TAM2 541 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 SMC6Q96SB8 1091 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 SIX2Q9NPC8 291 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 TTC7AQ9ULT0 858 aaPredicted RBP12.19□□□□□ -0.46
TRUB1-201ENST00000298746 PHTF1Q9UMS5 762 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 PCDHA2Q9Y5H9 948 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 USH1CQ9Y6N9 552 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 UFL1O94874 794 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 TTC4O95801 387 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 RFC5P40937 340 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 PTGIRP43119 386 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 PPATQ06203 517 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 SPARCL1Q14515 664 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 TBC1D9BQ66K14 1250 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 AGGF1Q8N302 714 aaeCLIP12.19□□□□□ -0.46
TRUB1-201ENST00000298746 STK32AQ8WU08 396 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 TXLNGYQ9BZA5 131 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 KIAA1683Q9H0B3 1180 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 PARVGQ9HBI0 331 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 ALG13Q9NP73 1137 aaKnown RBP12.19□□□□□ -0.46
TRUB1-201ENST00000298746 SRP68Q9UHB9 627 aaKnown RBP12.19□□□□□ -0.46
TRUB1-201ENST00000298746 ZFP69BQ9UJL9 534 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 ZBTB21Q9ULJ3 1066 aa12.19□□□□□ -0.46
TRUB1-201ENST00000298746 CFAP69A5D8W1 941 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 FAM47DPA6NHR8 397 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 DDX39AO00148 427 aaKnown RBP12.18□□□□□ -0.46
TRUB1-201ENST00000298746 LGR5O75473 907 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 DCTN3O75935 186 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 IFNB1P01574 187 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 KAZNQ674X7 775 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 VSTM1Q6UX27 236 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 TEX9Q8N6V9 391 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 SNF8Q96H20 258 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 WNT8AQ9H1J5 351 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 NPHS2Q9NP85 383 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 UBN1Q9NPG3 1134 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 PARP4Q9UKK3 1724 aaKnown RBP12.18□□□□□ -0.46
TRUB1-201ENST00000298746 ASTN1O14525 1302 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 EMSYQ7Z589 1322 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 COL5A2P05997 1499 aaPredicted RBP12.18□□□□□ -0.46
TRUB1-201ENST00000298746 SPDYE5A6NIY4 337 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 CYP26A1O43174 497 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 ATP5HO75947 161 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 MAPK4P31152 587 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 ABL2P42684 1182 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 CDR2Q01850 454 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 ZNF543Q08ER8 600 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 QRICH1Q2TAL8 776 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 SYT2Q8N9I0 419 aaPredicted RBP12.18□□□□□ -0.46
TRUB1-201ENST00000298746 CNKSR1Q969H4 720 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 GRAMD1AQ96CP6 724 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 MAGEB18Q96M61 343 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 TBC1D10AQ9BXI6 508 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 SAYSD1Q9NPB0 183 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.18□□□□□ -0.46
TRUB1-201ENST00000298746 STOML1Q9UBI4 398 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 PCYOX1Q9UHG3 505 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 ANAPC7Q9UJX3 599 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 FER1L4A9Z1Z3 1794 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 NVLO15381 856 aaKnown RBP12.18□□□□□ -0.46
TRUB1-201ENST00000298746 SLC16A3O15427 465 aaKnown RBP12.18□□□□□ -0.46
TRUB1-201ENST00000298746 SKIP12755 728 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 PTDSS1P48651 473 aaKnown RBP12.18□□□□□ -0.46
TRUB1-201ENST00000298746 JAM2P57087 298 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 MPP2Q14168 576 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 PRUNE1Q86TP1 453 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 SLF2Q8IX21 1173 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 CEP120Q8N960 986 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 CNBD1Q8NA66 436 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 DNAJC18Q9H819 358 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 ETAA1Q9NY74 926 aa12.18□□□□□ -0.46
TRUB1-201ENST00000298746 ZBTB39O15060 712 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 LINGO3P0C6S8 592 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 MTFR1Q15390 333 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 FOXR2Q6PJQ5 311 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 CYFIP1Q7L576 1253 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 SLC51AQ86UW1 340 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 CYP4X1Q8N118 509 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 FAM13CQ8NE31 585 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 ELMO3Q96BJ8 720 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 NYXQ9GZU5 481 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRUB1-201ENST00000298746 C2CD2Q9Y426 696 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 CICQ96RK0 1608 aaPredicted RBP12.17□□□□□ -0.46
TRUB1-201ENST00000298746 GOLGA8IPA6NC78 632 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 GOLGA8JA6NMD2 632 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 K7ENM7 598 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 RIMBP2O15034 1052 aa12.17□□□□□ -0.46
TRUB1-201ENST00000298746 BAG2O95816 211 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms