RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 ZMYND8Q9ULU4 1186 aaPredicted RBP6.54□□□□□ -1.36
SSX3-201ENST00000298396 DNM3Q9UQ16 869 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 PPME1Q9Y570 386 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 CDY2AQ9Y6F7 541 aa6.54□□□□□ -1.36
SSX3-201ENST00000298396 MYO7AQ13402 2215 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 CDK2AP1O14519 115 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 TLR3O15455 904 aaKnown RBP6.53□□□□□ -1.36
SSX3-201ENST00000298396 CSDE1O75534 798 aaKnown RBP6.53□□□□□ -1.36
SSX3-201ENST00000298396 TIMP1P01033 207 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 SSBP05455 408 aaKnown RBP eCLIP6.53□□□□□ -1.36
SSX3-201ENST00000298396 IQCF3P0C7M6 154 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 GNAT1P11488 350 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 BMP2P12643 396 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 SELPP16109 830 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 WEE1P30291 646 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 TXLNAP40222 546 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 SYKP43405 635 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 AFMP43652 599 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 ZNF131P52739 623 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 CCL23P55773 120 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 UBE2HP62256 183 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 FAM160A1Q05DH4 1040 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 EHHADHQ08426 723 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 CUL4BQ13620 913 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 LPIN1Q14693 890 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 OCLNQ16625 522 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 KIZQ2M2Z5 673 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 CDCA2Q69YH5 1023 aaPredicted RBP6.53□□□□□ -1.36
SSX3-201ENST00000298396 TAF2Q6P1X5 1199 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 CNNM4Q6P4Q7 775 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 Q6ZNB5 142 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 KRBA2Q6ZNG9 492 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 C16orf59Q7L2K0 433 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 DYMQ7RTS9 669 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 RHPN2Q8IUC4 686 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 KCTD17Q8N5Z5 321 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 GLIS3Q8NEA6 775 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 CAGE1Q8TC20 777 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 LINC01599Q8WXQ3 324 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 ERCC4Q92889 916 aaPredicted RBP6.53□□□□□ -1.36
SSX3-201ENST00000298396 OSMRQ99650 979 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 C7orf25Q9BPX7 421 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 HTATIP2Q9BUP3 242 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 KIFC3Q9BVG8 833 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 TRIM9Q9C026 710 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 CCDC113Q9H0I3 377 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 BLZF1Q9H2G9 400 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 TNMDQ9H2S6 317 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 AGO3Q9H9G7 860 aaKnown RBP6.53□□□□□ -1.36
SSX3-201ENST00000298396 PRDM5Q9NQX1 630 aaPredicted RBP6.53□□□□□ -1.36
SSX3-201ENST00000298396 TMEM39AQ9NV64 488 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 FAM13BQ9NYF5 915 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 SUCLA2Q9P2R7 463 aaPredicted RBP6.53□□□□□ -1.36
SSX3-201ENST00000298396 CCDC39Q9UFE4 941 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 AKT3Q9Y243 479 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 COL4A3BPQ9Y5P4 624 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 CHD9Q3L8U1 2897 aa6.53□□□□□ -1.36
SSX3-201ENST00000298396 SCN1AP35498 2009 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 CHD7Q9P2D1 2997 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 A0A087WZ62 844 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 H0YGN5 161 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 GAS2O43903 313 aaKnown RBP6.52□□□□□ -1.37
SSX3-201ENST00000298396 MGEA5O60502 916 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 CAND2O75155 1236 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 CXCL10P02778 98 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 CSF2RAP15509 400 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 FGFR4P22455 802 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 MCM4P33991 863 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 NPTX2P47972 431 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 NLRP11P59045 1033 aaKnown RBP6.52□□□□□ -1.37
SSX3-201ENST00000298396 MBTD1Q05BQ5 628 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 PNOCQ13519 176 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 WDR44Q5JSH3 913 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 FBXO47Q5MNV8 452 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 FAM102BQ5T8I3 360 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 IER5Q5VY09 327 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 SV2BQ7L1I2 683 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 LRRC8DQ7L1W4 858 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 FAM228AQ86W67 206 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 SFR1Q86XK3 245 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 NME8Q8N427 588 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 IQUBQ8NA54 791 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 TSEN2Q8NCE0 465 aaKnown RBP6.52□□□□□ -1.37
SSX3-201ENST00000298396 MCPH1Q8NEM0 835 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 RASSF8Q8NHQ8 419 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 PSPC1Q8WXF1 523 aaKnown RBP6.52□□□□□ -1.37
SSX3-201ENST00000298396 SLC7A3Q8WY07 619 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 DPF3Q92784 378 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 BADQ92934 168 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 HPS3Q969F9 1004 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 FDXACB1Q9BRP7 624 aaPredicted RBP6.52□□□□□ -1.37
SSX3-201ENST00000298396 STRA6Q9BX79 667 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 CELF4Q9BZC1 486 aaKnown RBP6.52□□□□□ -1.37
SSX3-201ENST00000298396 IKZF4Q9H2S9 585 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 TMX1Q9H3N1 280 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 CUEDC2Q9H467 287 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 MAGEF1Q9HAY2 307 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 DACT1Q9NYF0 836 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 KCND2Q9NZV8 630 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 ARHGAP28Q9P2N2 729 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms