RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 NIFKQ9BYG3 293 aaKnown RBP7.2□□□□□ -1.26
TMC1-201ENST00000297784 ABHD16BQ9H3Z7 469 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 GNEQ9Y223 722 aaKnown RBP7.2□□□□□ -1.26
TMC1-201ENST00000297784 A0A1W2PQC6 194 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 ARHGEF35A5YM69 484 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 N4BP3O15049 544 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 MDH1P40925 334 aaKnown RBP7.2□□□□□ -1.26
TMC1-201ENST00000297784 STAT5BP51692 787 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 SARNPP82979 210 aaKnown RBP7.2□□□□□ -1.26
TMC1-201ENST00000297784 NAIF1Q69YI7 327 aaPredicted RBP7.2□□□□□ -1.26
TMC1-201ENST00000297784 LRRC55Q6ZSA7 311 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 DHX37Q8IY37 1157 aaKnown RBP7.2□□□□□ -1.26
TMC1-201ENST00000297784 TRPV1Q8NER1 839 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 ATP6V0A1Q93050 837 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 LENG1Q96BZ8 264 aaPredicted RBP7.2□□□□□ -1.26
TMC1-201ENST00000297784 ZIM3Q96PE6 472 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 C16orf70Q9BSU1 422 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 CFHR5Q9BXR6 569 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 TSGA10Q9BZW7 698 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 RNPEPQ9H4A4 650 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 RABEP2Q9H5N1 569 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 PARVGQ9HBI0 331 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 RNF186Q9NXI6 227 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 TPX2Q9ULW0 747 aaKnown RBP7.2□□□□□ -1.26
TMC1-201ENST00000297784 SNX12Q9UMY4 172 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 C5orf60A6NFR6 353 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 HMGB1P1B2RPK0 211 aaPredicted RBP7.2□□□□□ -1.26
TMC1-201ENST00000297784 RBAK-RBAKDNI3L0D1 243 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 TGFB1I1O43294 461 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 MGRN1O60291 552 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 USO1O60763 962 aaKnown RBP7.2□□□□□ -1.26
TMC1-201ENST00000297784 OATP04181 439 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 KRT18P05783 430 aaKnown RBP7.2□□□□□ -1.26
TMC1-201ENST00000297784 GHRP10912 638 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 C2orf54Q08AI8 447 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 BMT2Q1RMZ1 405 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 DUSP28Q4G0W2 176 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 XKR9Q5GH70 373 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 TCP11X2Q5H9J9 407 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 RNF187Q5TA31 235 aaPredicted RBP7.2□□□□□ -1.26
TMC1-201ENST00000297784 OLFML2BQ68BL8 750 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 CCDC121Q6ZUS5 278 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 CCDC170Q8IYT3 715 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 MYCT1Q8N699 235 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 ARMC2Q8NEN0 867 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 ZBTB10Q96DT7 871 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 CAPZA3Q96KX2 299 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 CEP170P1Q96L14 293 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 CCDC114Q96M63 670 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 ZHX3Q9H4I2 956 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 DHX33Q9H6R0 707 aaKnown RBP7.2□□□□□ -1.26
TMC1-201ENST00000297784 STIM2Q9P246 746 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 CAPN11Q9UMQ6 739 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 COL4A3BPQ9Y5P4 624 aa7.2□□□□□ -1.26
TMC1-201ENST00000297784 TNPO2O14787 897 aaKnown RBP7.19□□□□□ -1.26
TMC1-201ENST00000297784 PSMA7O14818 248 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 DNAJC8O75937 253 aaPredicted RBP7.19□□□□□ -1.26
TMC1-201ENST00000297784 ALDH1A1P00352 501 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 HOXD8P13378 290 aaPredicted RBP7.19□□□□□ -1.26
TMC1-201ENST00000297784 NR1D1P20393 614 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 PSMC4P43686 418 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 ADCY2Q08462 1091 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 MKRN4PQ13434 485 aaPredicted RBP7.19□□□□□ -1.26
TMC1-201ENST00000297784 SLMAPQ14BN4 828 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 XKR3Q5GH77 459 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 TTC19Q6DKK2 380 aaPredicted RBP7.19□□□□□ -1.26
TMC1-201ENST00000297784 PLPPR4Q7Z2D5 763 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 NELFCDQ8IXH7 590 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 ZC3H3Q8IXZ2 948 aaKnown RBP7.19□□□□□ -1.26
TMC1-201ENST00000297784 MYOCDQ8IZQ8 938 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 PPTC7Q8NI37 304 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 ZNF483Q8TF39 744 aaPredicted RBP7.19□□□□□ -1.26
TMC1-201ENST00000297784 SEPT9Q9UHD8 586 aaPredicted RBP7.19□□□□□ -1.26
TMC1-201ENST00000297784 DMGDHQ9UI17 866 aaKnown RBP7.19□□□□□ -1.26
TMC1-201ENST00000297784 EMSYQ7Z589 1322 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 ADGRA3Q8IWK6 1321 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 TRPA1O75762 1119 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 MARK3P27448 753 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 CYLC1P35663 651 aaPredicted RBP7.19□□□□□ -1.26
TMC1-201ENST00000297784 CDK17Q00537 523 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 IFT88Q13099 833 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 ANKRD20A8PQ5CZ79 823 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 ODR4Q5SWX8 454 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 CRELD2Q6UXH1 353 aaPredicted RBP7.19□□□□□ -1.26
TMC1-201ENST00000297784 ARFGAP2Q8N6H7 521 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 SPATA4Q8NEY3 305 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 AFG1LQ8WV93 481 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 TRIB2Q92519 343 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 TATDN2Q93075 761 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 SH3GL3Q99963 347 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 NTPCRQ9BSD7 190 aaKnown RBP7.19□□□□□ -1.26
TMC1-201ENST00000297784 LRRC1Q9BTT6 524 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 HOMER3Q9NSC5 361 aa7.19□□□□□ -1.26
TMC1-201ENST00000297784 ZNF233A6NK53 670 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 PLS3P13797 630 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 PRKCZQ05513 592 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 TRIM32Q13049 653 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 LAMC2Q13753 1193 aa7.18□□□□□ -1.26
TMC1-201ENST00000297784 KNOP1Q1ED39 458 aaKnown RBP7.18□□□□□ -1.26
TMC1-201ENST00000297784 MTERF2Q49AM1 385 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms