RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 DYRK4Q9NR20 520 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 PAG1Q9NWQ8 432 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 UGGT2Q9NYU1 1516 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 RPAP1Q9BWH6 1393 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-201ENST00000297405 ATF7P17544 494 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-201ENST00000297405 SCYL1Q96KG9 808 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 THAP9Q9H5L6 903 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 VPS9D1Q9Y2B5 631 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 BAZ2AQ9UIF9 1905 aaKnown RBP5.11□□□□□ -1.59
CSMD3-201ENST00000297405 A0A1W2PQC6 194 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 A6NJR5 290 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 CRTAPO75718 401 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-201ENST00000297405 MAGEA4P43358 317 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 RAD23AP54725 363 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 ZNF544Q6NX49 715 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 MICU2Q8IYU8 434 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 LSM14BQ9BX40 385 aaKnown RBP5.11□□□□□ -1.59
CSMD3-201ENST00000297405 MRPL44Q9H9J2 332 aaKnown RBP5.11□□□□□ -1.59
CSMD3-201ENST00000297405 C15orf41Q9Y2V0 281 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 FAM32AQ9Y421 112 aaKnown RBP5.11□□□□□ -1.59
CSMD3-201ENST00000297405 PIGBOS1A0A0B4J2F0 54 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 P4HBP07237 508 aaKnown RBP5.11□□□□□ -1.59
CSMD3-201ENST00000297405 RCAN1P53805 252 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 EIF2B5Q13144 721 aaKnown RBP5.11□□□□□ -1.59
CSMD3-201ENST00000297405 SUZ12Q15022 739 aaKnown RBP5.11□□□□□ -1.59
CSMD3-201ENST00000297405 SURF1Q15526 300 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 TYSND1Q2T9J0 566 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 SNAP47Q5SQN1 464 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 LRRC8DQ7L1W4 858 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 MS4A14Q96JA4 679 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 WNT8AQ9H1J5 351 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 RAPGEF6Q8TEU7 1601 aa5.11□□□□□ -1.59
CSMD3-201ENST00000297405 SLCO1B7G3V0H7 640 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 ACAT1P24752 427 aaKnown RBP5.1□□□□□ -1.59
CSMD3-201ENST00000297405 MAGOHP61326 146 aaKnown RBP5.1□□□□□ -1.59
CSMD3-201ENST00000297405 ACTN3Q08043 901 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-201ENST00000297405 ZFYVE19Q96K21 471 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 SAR1AQ9NR31 198 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 ANKRD6Q9Y2G4 727 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 DNMBPQ6XZF7 1577 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 FAM95CA0A1B0GW59 222 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 GRM8O00222 908 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 SNX2O60749 519 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 NR1I2O75469 434 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 TCF3P15923 654 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 TUFMP49411 452 aaKnown RBP5.1□□□□□ -1.59
CSMD3-201ENST00000297405 NCKAP1LP55160 1127 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 TRIM25Q14258 630 aaKnown RBP5.1□□□□□ -1.59
CSMD3-201ENST00000297405 KMT5BQ4FZB7 885 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 PDCD4Q53EL6 469 aaKnown RBP5.1□□□□□ -1.59
CSMD3-201ENST00000297405 TCP11X2Q5H9J9 407 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 PLEKHA7Q6IQ23 1121 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 ARMCX5Q6P1M9 558 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 BTNL9Q6UXG8 535 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 ZSCAN32Q9NX65 697 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 STK39Q9UEW8 545 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 FANCD2Q9BXW9 1451 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 RTEL1-TNFRSF6BF6WH68 1400 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 TPD52L2O43399 206 aaKnown RBP5.1□□□□□ -1.59
CSMD3-201ENST00000297405 ERP29P30040 261 aaKnown RBP5.1□□□□□ -1.59
CSMD3-201ENST00000297405 JDP2Q8WYK2 163 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 BORCS5Q969J3 196 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 IL17RAQ96F46 866 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 TUBGCP2Q9BSJ2 902 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 FRMD8P1Q9BZ68 369 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-201ENST00000297405 VPS33BQ9H267 617 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 IMPAD1Q9NX62 359 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 CCDC61Q9Y6R9 512 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 MAST3O60307 1309 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 PSTPIP1O43586 416 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 MYBL1P10243 752 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 NCF2P19878 526 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-201ENST00000297405 MSH3P20585 1137 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 GCLCP48506 637 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-201ENST00000297405 MXI1P50539 228 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 AP3S2P59780 193 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 ENOSF1Q7L5Y1 443 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 PLGRKTQ9HBL7 147 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 VAV3Q9UKW4 847 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 GPC6Q9Y625 555 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-201ENST00000297405 MAST1Q9Y2H9 1570 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 DNAJC6O75061 913 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 EXOC3L4Q17RC7 722 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 C15orf59Q2T9L4 293 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-201ENST00000297405 NDUFAF2Q8N183 169 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 SPDYE1Q8NFV5 336 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-201ENST00000297405 SUN5Q8TC36 379 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 CYFIP2Q96F07 1278 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 PLAAQ9Y263 795 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 SHANK2Q9UPX8 1470 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 UFL1O94874 794 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 CPA3P15088 417 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 HK2P52789 917 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 EHHADHQ08426 723 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 APOA5Q6Q788 366 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 SFR1Q86XK3 245 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 ZNF354CQ86Y25 554 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 FAF2Q96CS3 445 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 DSCC1Q9BVC3 393 aa5.1□□□□□ -1.59
CSMD3-201ENST00000297405 EP300Q09472 2414 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms