RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 DOCK1Q14185 1865 aa10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 CCDC169A6NNP5 214 aa10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 PHF20L1A8MW92 1017 aa10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 MYO1FO00160 1098 aa10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 NFIBO00712 420 aa10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 LRRN2O75325 713 aa10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 CCND2P30279 289 aa10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 GCLMP48507 274 aa10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 BYSLQ13895 437 aaKnown RBP10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 ZYXQ15942 572 aaKnown RBP10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 JAMLQ86YT9 394 aa10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 ARHGEF19Q8IW93 802 aa10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 TMEM161BQ8NDZ6 487 aa10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 FBXL13Q8NEE6 735 aa10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 CD101Q93033 1021 aa10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 PGM2Q96G03 612 aa10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 IKZF4Q9H2S9 585 aa10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 PABPC3Q9H361 631 aaKnown RBP10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 POLD4Q9HCU8 107 aa10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 NFASCO94856 1347 aa10.77□□□□□ -0.69
TNFRSF11B-201ENST00000297350 DDX39AO00148 427 aaKnown RBP10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 RAD17O75943 681 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 ALAS1P13196 640 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 RPS12P25398 132 aaKnown RBP10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 BPIFB4P59827 614 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 IFFO1Q0D2I5 559 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 PRPF4BQ13523 1007 aaKnown RBP10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 PLCB4Q15147 1175 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 TRADDQ15628 312 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 BRDTQ58F21 947 aaPredicted RBP10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 NAA35Q5VZE5 725 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 NLRP14Q86W24 1093 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 IL31RAQ8NI17 732 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 SLC20A1Q8WUM9 679 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 PDCD2LQ9BRP1 358 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 MOV10L1Q9BXT6 1211 aaKnown RBP10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 NEUROG2Q9H2A3 272 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 AVENQ9NQS1 362 aaPredicted RBP10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 PXMP2Q9NR77 195 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 ZNF277Q9NRM2 450 aaPredicted RBP10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 TAS2R14Q9NYV8 317 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 PCDHA10Q9Y5I2 948 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 PASKQ96RG2 1323 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 BACH1O14867 736 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 TRIM66O15016 1216 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 PEX5P50542 639 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 ATP1A2P50993 1020 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 PEX3P56589 373 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 DLG4P78352 724 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 DALRD3Q5D0E6 543 aaKnown RBP10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 XKR9Q5GH70 373 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 MYCBPAPQ8TBZ2 947 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 PARD3BQ8TEW8 1205 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 ZNF473Q8WTR7 871 aaKnown RBP10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 ALG3Q92685 438 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 TLCD1Q96CP7 247 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 SGIP1Q9BQI5 828 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 PCIF1Q9H4Z3 704 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 PCDHA3Q9Y5H8 950 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 CD2APQ9Y5K6 639 aa10.76□□□□□ -0.69
TNFRSF11B-201ENST00000297350 WDR81Q562E7 1941 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 SLC16A4O15374 487 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 MEFVO15553 781 aaPredicted RBP10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 DGAT1O75907 488 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 CHRNB2P17787 502 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 USP8P40818 1118 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 SLC1A1P43005 524 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 PTGIRP43119 386 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 PMS2P54278 862 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 RWDD2BP57060 319 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 ADCY2Q08462 1091 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 KRT71Q3SY84 523 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 FAM102BQ5T8I3 360 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 DENND2CQ68D51 928 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 SLC30A10Q6XR72 485 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 RNF207Q6ZRF8 634 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 NOP9Q86U38 636 aaKnown RBP10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 TAX1BP1Q86VP1 789 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 DDX42Q86XP3 938 aaKnown RBP eCLIP10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 RDH13Q8NBN7 331 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 ZNF564Q8TBZ8 553 aaPredicted RBP10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 ZBTB9Q96C00 473 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 TRERF1Q96PN7 1200 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 RMDN3Q96TC7 470 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 KMT5AQ9NQR1 393 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 HOMER3Q9NSC5 361 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 TRPC6Q9Y210 931 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 DICER1Q9UPY3 1922 aaKnown RBP10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 GMNCA6NCL1 334 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 TRAPPC3O43617 180 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 ADRB2P07550 413 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 CYP11B1P15538 503 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 COMTP21964 271 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 NPTX2P47972 431 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 ZNF280AP59817 542 aaPredicted RBP10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 RPS6P62753 249 aaKnown RBP10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 FMO1Q01740 532 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 GUCY1A3Q02108 690 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 CAV1Q03135 178 aa10.75□□□□□ -0.69
TNFRSF11B-201ENST00000297350 CYP24A1Q07973 514 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms