RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 GTF2H1P32780 548 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 POU5F1BQ06416 359 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 BMS1Q14692 1282 aaKnown RBP9.91□□□□□ -0.82
PDPN-201ENST00000294489 DRAP1Q14919 205 aaPredicted RBP9.91□□□□□ -0.82
PDPN-201ENST00000294489 NAB2Q15742 525 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 EPC2Q52LR7 807 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 PARD6BQ9BYG5 372 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 NFKBIZQ9BYH8 718 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 ERAP1Q9NZ08 941 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 TSKSQ9UJT2 592 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 SNX12Q9UMY4 172 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 COQ4Q9Y3A0 265 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 CASP8AP2Q9UKL3 1982 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 ATP8B3O60423 1300 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.91□□□□□ -0.82
PDPN-201ENST00000294489 KIF3CO14782 793 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 HNRNPDLO14979 420 aaKnown RBP9.91□□□□□ -0.82
PDPN-201ENST00000294489 PPFIA4O75335 1185 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 C22orf31O95567 290 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 TUBBP07437 444 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 TCP1P17987 556 aaKnown RBP9.91□□□□□ -0.82
PDPN-201ENST00000294489 ADCYAP1R1P41586 468 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 SREBF2Q12772 1141 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 MXD4Q14582 209 aaPredicted RBP9.91□□□□□ -0.82
PDPN-201ENST00000294489 TAF1CQ15572 869 aaPredicted RBP9.91□□□□□ -0.82
PDPN-201ENST00000294489 SNRNP35Q16560 246 aaKnown RBP9.91□□□□□ -0.82
PDPN-201ENST00000294489 ALKBH5Q6P6C2 394 aaKnown RBP9.91□□□□□ -0.82
PDPN-201ENST00000294489 TRIM50Q86XT4 487 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 EPC1Q9H2F5 836 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 KIAA1586Q9HCI6 787 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 NAGPAQ9UK23 515 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 NENFQ9UMX5 172 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 GNEQ9Y223 722 aaKnown RBP9.91□□□□□ -0.82
PDPN-201ENST00000294489 DCAF8L1A6NGE4 600 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 BUB1O43683 1085 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 EVI5O60447 810 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 SRGAP2O75044 1071 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 TFRCP02786 760 aaKnown RBP9.91□□□□□ -0.82
PDPN-201ENST00000294489 GCLMP48507 274 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 MXI1P50539 228 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 EFNA5P52803 228 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 DLG4P78352 724 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 IFI16Q16666 785 aaKnown RBP9.91□□□□□ -0.82
PDPN-201ENST00000294489 IFNLR1Q8IU57 520 aaPredicted RBP9.91□□□□□ -0.82
PDPN-201ENST00000294489 POMGNT1Q8WZA1 660 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 GLG1Q92896 1179 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 BICD1Q96G01 975 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 CAPZA3Q96KX2 299 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 AJAP1Q9UKB5 411 aaPredicted RBP9.91□□□□□ -0.82
PDPN-201ENST00000294489 HYOU1Q9Y4L1 999 aa9.91□□□□□ -0.82
PDPN-201ENST00000294489 GOLGA8IPA6NC78 632 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 GOLGA8JA6NMD2 632 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 BTNL10A8MVZ5 291 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 ADCY6O43306 1168 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 EDN1P05305 212 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 ZNF865P0CJ78 1059 aaPredicted RBP9.9□□□□□ -0.82
PDPN-201ENST00000294489 ZSCAN20P17040 1043 aaPredicted RBP9.9□□□□□ -0.82
PDPN-201ENST00000294489 KLRC1P26715 233 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 PPP3CAQ08209 521 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 DRP2Q13474 957 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 ZPBP2Q6X784 338 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 GPD1LQ8N335 351 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 PARD3BQ8TEW8 1205 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 PRPF31Q8WWY3 499 aaKnown RBP9.9□□□□□ -0.82
PDPN-201ENST00000294489 PSPC1Q8WXF1 523 aaKnown RBP9.9□□□□□ -0.82
PDPN-201ENST00000294489 GPR88Q9GZN0 384 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 HAPLN2Q9GZV7 340 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 RNPEPQ9H4A4 650 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 OGFRQ9NZT2 677 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 FLRT1Q9NZU1 646 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 SALL4Q9UJQ4 1053 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 EVPLQ92817 2033 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 ABLIM1O14639 778 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 EXTL3O43909 919 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 FAM189A1O60320 539 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 MSCO60682 206 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 MMP3P08254 477 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 CYP24A1Q07973 514 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 LAMTOR4Q0VGL1 99 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 STRN3Q13033 797 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 BRD3Q15059 726 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 SLFN12LQ6IEE8 588 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 C15orf39Q6ZRI6 1047 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 CBWD2Q8IUF1 395 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 MSANTD4Q8NCY6 345 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 OLIG1Q8TAK6 271 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 ZFYVE28Q9HCC9 887 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 ARFGAP3Q9NP61 516 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 Q9Y3F1 56 aa9.9□□□□□ -0.82
PDPN-201ENST00000294489 A0A0B4J269 797 aa9.89□□□□□ -0.83
PDPN-201ENST00000294489 CCDC151A5D8V7 595 aa9.89□□□□□ -0.83
PDPN-201ENST00000294489 ASAP2O43150 1006 aa9.89□□□□□ -0.83
PDPN-201ENST00000294489 ARHGAP44Q17R89 818 aa9.89□□□□□ -0.83
PDPN-201ENST00000294489 PHLDB3Q6NSJ2 640 aa9.89□□□□□ -0.83
PDPN-201ENST00000294489 CRELD2Q6UXH1 353 aaPredicted RBP9.89□□□□□ -0.83
PDPN-201ENST00000294489 SMC1BQ8NDV3 1235 aa9.89□□□□□ -0.83
PDPN-201ENST00000294489 DEPTORQ8TB45 409 aa9.89□□□□□ -0.83
PDPN-201ENST00000294489 AFG1LQ8WV93 481 aa9.89□□□□□ -0.83
PDPN-201ENST00000294489 SOCS4Q8WXH5 440 aa9.89□□□□□ -0.83
PDPN-201ENST00000294489 CCDC127Q96BQ5 260 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms